{"id":"https://openalex.org/W3004530081","doi":"https://doi.org/10.1109/bibm47256.2019.8983373","title":"Data Provenance Management of Bioinformatics Workflows in Federated Clouds","display_name":"Data Provenance Management of Bioinformatics Workflows in Federated Clouds","publication_year":2019,"publication_date":"2019-11-01","ids":{"openalex":"https://openalex.org/W3004530081","doi":"https://doi.org/10.1109/bibm47256.2019.8983373","mag":"3004530081"},"language":"en","primary_location":{"id":"doi:10.1109/bibm47256.2019.8983373","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibm47256.2019.8983373","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2019 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5071647035","display_name":"Polyane Wercelens","orcid":"https://orcid.org/0000-0002-8494-1267"},"institutions":[{"id":"https://openalex.org/I150729083","display_name":"Universidade de Bras\u00edlia","ror":"https://ror.org/02xfp8v59","country_code":"BR","type":"education","lineage":["https://openalex.org/I150729083"]}],"countries":["BR"],"is_corresponding":true,"raw_author_name":"Polyane Wercelens","raw_affiliation_strings":["Department of Computer Science, University of Brasilia, Brazil"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of Brasilia, Brazil","institution_ids":["https://openalex.org/I150729083"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5004814984","display_name":"Waldeyr Mendes Cordeiro da Silva","orcid":"https://orcid.org/0000-0002-8660-6331"},"institutions":[{"id":"https://openalex.org/I4210132153","display_name":"Instituto Federal de Goi\u00e1s","ror":"https://ror.org/03gq9pd80","country_code":"BR","type":"education","lineage":["https://openalex.org/I4210132153"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Waldeyr da Silva","raw_affiliation_strings":["NEPBIO (Group of Biological Studies and Research on Cerrado), Federal Institute of Goi\u00e1s (IFG), Brazil"],"affiliations":[{"raw_affiliation_string":"NEPBIO (Group of Biological Studies and Research on Cerrado), Federal Institute of Goi\u00e1s (IFG), Brazil","institution_ids":["https://openalex.org/I4210132153"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5041493391","display_name":"Klayton Castro","orcid":"https://orcid.org/0000-0003-0544-4527"},"institutions":[{"id":"https://openalex.org/I150729083","display_name":"Universidade de Bras\u00edlia","ror":"https://ror.org/02xfp8v59","country_code":"BR","type":"education","lineage":["https://openalex.org/I150729083"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Klayton Castro","raw_affiliation_strings":["Department of Computer Science, University of Brasilia, Brazil"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of Brasilia, Brazil","institution_ids":["https://openalex.org/I150729083"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5031701924","display_name":"Alet\u00e9ia Ara\u00fajo","orcid":"https://orcid.org/0000-0003-4645-6700"},"institutions":[{"id":"https://openalex.org/I150729083","display_name":"Universidade de Bras\u00edlia","ror":"https://ror.org/02xfp8v59","country_code":"BR","type":"education","lineage":["https://openalex.org/I150729083"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Aleteia P. F. Araujo","raw_affiliation_strings":["Department of Computer Science, University of Brasilia, Brazil"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of Brasilia, Brazil","institution_ids":["https://openalex.org/I150729083"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5085416987","display_name":"S\u00e9rgio Lifschitz","orcid":"https://orcid.org/0000-0003-3073-3734"},"institutions":[{"id":"https://openalex.org/I2699952","display_name":"Pontifical Catholic University of Rio de Janeiro","ror":"https://ror.org/01dg47b60","country_code":"BR","type":"education","lineage":["https://openalex.org/I2699952"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Sergio Lifschitz","raw_affiliation_strings":["Department of Informatics, Pontifical Catholic University of Rio de Janeiro, Brazil"],"affiliations":[{"raw_affiliation_string":"Department of Informatics, Pontifical Catholic University of Rio de Janeiro, Brazil","institution_ids":["https://openalex.org/I2699952"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5054089208","display_name":"Maristela Holanda","orcid":"https://orcid.org/0000-0002-0883-2579"},"institutions":[{"id":"https://openalex.org/I150729083","display_name":"Universidade de Bras\u00edlia","ror":"https://ror.org/02xfp8v59","country_code":"BR","type":"education","lineage":["https://openalex.org/I150729083"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Maristela Holanda","raw_affiliation_strings":["Department of Computer Science, University of Brasilia, Brazil"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of Brasilia, Brazil","institution_ids":["https://openalex.org/I150729083"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5071647035"],"corresponding_institution_ids":["https://openalex.org/I150729083"],"apc_list":null,"apc_paid":null,"fwci":0.8107,"has_fulltext":false,"cited_by_count":2,"citation_normalized_percentile":{"value":0.88090414,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":94},"biblio":{"volume":"5","issue":null,"first_page":"750","last_page":"754"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},"topics":[{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},{"id":"https://openalex.org/T11937","display_name":"Research Data Management Practices","score":0.9871000051498413,"subfield":{"id":"https://openalex.org/subfields/1710","display_name":"Information Systems"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10715","display_name":"Distributed and Parallel Computing Systems","score":0.9707000255584717,"subfield":{"id":"https://openalex.org/subfields/1705","display_name":"Computer Networks and Communications"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/cloud-computing","display_name":"Cloud computing","score":0.8352154493331909},{"id":"https://openalex.org/keywords/workflow","display_name":"Workflow","score":0.8165581226348877},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8118293285369873},{"id":"https://openalex.org/keywords/software-portability","display_name":"Software portability","score":0.7610870003700256},{"id":"https://openalex.org/keywords/nosql","display_name":"NoSQL","score":0.6800514459609985},{"id":"https://openalex.org/keywords/provenance","display_name":"Provenance","score":0.5376322269439697},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.4948112368583679},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.4323861300945282},{"id":"https://openalex.org/keywords/data-management","display_name":"Data management","score":0.4320200979709625},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.33373433351516724},{"id":"https://openalex.org/keywords/distributed-computing","display_name":"Distributed computing","score":0.33195799589157104},{"id":"https://openalex.org/keywords/big-data","display_name":"Big data","score":0.27640587091445923},{"id":"https://openalex.org/keywords/operating-system","display_name":"Operating system","score":0.12599676847457886}],"concepts":[{"id":"https://openalex.org/C79974875","wikidata":"https://www.wikidata.org/wiki/Q483639","display_name":"Cloud computing","level":2,"score":0.8352154493331909},{"id":"https://openalex.org/C177212765","wikidata":"https://www.wikidata.org/wiki/Q627335","display_name":"Workflow","level":2,"score":0.8165581226348877},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8118293285369873},{"id":"https://openalex.org/C63000827","wikidata":"https://www.wikidata.org/wiki/Q3080428","display_name":"Software portability","level":2,"score":0.7610870003700256},{"id":"https://openalex.org/C2779599972","wikidata":"https://www.wikidata.org/wiki/Q82231","display_name":"NoSQL","level":3,"score":0.6800514459609985},{"id":"https://openalex.org/C2780049196","wikidata":"https://www.wikidata.org/wiki/Q23582628","display_name":"Provenance","level":2,"score":0.5376322269439697},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.4948112368583679},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.4323861300945282},{"id":"https://openalex.org/C1668388","wikidata":"https://www.wikidata.org/wiki/Q1149776","display_name":"Data management","level":2,"score":0.4320200979709625},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.33373433351516724},{"id":"https://openalex.org/C120314980","wikidata":"https://www.wikidata.org/wiki/Q180634","display_name":"Distributed computing","level":1,"score":0.33195799589157104},{"id":"https://openalex.org/C75684735","wikidata":"https://www.wikidata.org/wiki/Q858810","display_name":"Big data","level":2,"score":0.27640587091445923},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.12599676847457886},{"id":"https://openalex.org/C127313418","wikidata":"https://www.wikidata.org/wiki/Q1069","display_name":"Geology","level":0,"score":0.0},{"id":"https://openalex.org/C5900021","wikidata":"https://www.wikidata.org/wiki/Q163082","display_name":"Petrology","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/bibm47256.2019.8983373","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibm47256.2019.8983373","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2019 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/9","display_name":"Industry, innovation and infrastructure","score":0.6399999856948853}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":28,"referenced_works":["https://openalex.org/W1966822396","https://openalex.org/W1997512351","https://openalex.org/W2011893902","https://openalex.org/W2078962046","https://openalex.org/W2080071958","https://openalex.org/W2084153822","https://openalex.org/W2097288488","https://openalex.org/W2102278945","https://openalex.org/W2107772251","https://openalex.org/W2108234281","https://openalex.org/W2110417468","https://openalex.org/W2117267833","https://openalex.org/W2131271579","https://openalex.org/W2131725701","https://openalex.org/W2134526812","https://openalex.org/W2168103533","https://openalex.org/W2346143774","https://openalex.org/W2410507634","https://openalex.org/W2566508671","https://openalex.org/W2574208942","https://openalex.org/W2577790658","https://openalex.org/W2735271215","https://openalex.org/W2751102253","https://openalex.org/W2775805069","https://openalex.org/W2788535751","https://openalex.org/W2944745179","https://openalex.org/W4254236407","https://openalex.org/W4256353202"],"related_works":["https://openalex.org/W2799973158","https://openalex.org/W2419153746","https://openalex.org/W3089119258","https://openalex.org/W2923327995","https://openalex.org/W2518340158","https://openalex.org/W3147331693","https://openalex.org/W349054995","https://openalex.org/W2086537700","https://openalex.org/W2997849137","https://openalex.org/W4246713129"],"abstract_inverted_index":{"In":[0,33],"Bioinformatics,":[1],"the":[2,12,18,25,28,36,45,78,101,116,148,155,164],"reproducibility":[3],"of":[4,22,27,81,87,104,126,163],"experiments":[5],"is":[6,124,144],"a":[7,31,84,96,119],"fundamental":[8],"principle":[9],"to":[10,35,52,147],"which":[11],"data":[13,29,37,103,134,142],"provenance":[14,102,135,143],"significantly":[15],"contributes":[16],"through":[17],"acquisition":[19],"and":[20,44,65,69,83],"management":[21,97],"information":[23],"about":[24],"trajectory":[26],"in":[30,112,137],"workflow.":[32],"addition":[34],"provenance,":[38],"aspects":[39],"such":[40],"as":[41,118],"program":[42],"configurations":[43],"entire":[46],"computational":[47,60],"environment":[48,72],"must":[49],"be":[50,159],"considered":[51],"achieve":[53],"this":[54,91],"goal.":[55],"Cloud":[56,75],"computing":[57,88],"can":[58,158],"provide":[59],"resources,":[61],"hiding":[62],"technical":[63],"details":[64],"providing":[66],"an":[67],"accessible":[68],"configurable":[70],"on-demand":[71],"for":[73,161],"researchers.":[74],"federation":[76],"enables":[77],"broad":[79],"distribution":[80],"services":[82],"flexible":[85],"combination":[86],"power.":[89],"Considering":[90],"particular":[92],"scenario,":[93],"we":[94],"propose":[95],"platform":[98,123,157],"that":[99,128,154],"collects":[100],"Bioinformatics":[105],"workflows":[106,132],"allowing":[107],"portability":[108],"between":[109],"different":[110],"clouds":[111,114],"federated":[113],"using":[115],"Infrastructure":[117],"Service":[120],"model.":[121],"This":[122],"composed":[125],"tools":[127],"support":[129],"running":[130],"these":[131],"with":[133],"captured":[136,145],"NoSQL":[138],"databases.":[139],"The":[140,151],"retrospective":[141],"according":[146],"PROV-DM":[149],"norms.":[150],"findings":[152],"indicate":[153],"proposed":[156],"used":[160],"some":[162],"most":[165],"commoninly":[166],"available":[167],"clouds.":[168]},"counts_by_year":[{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}