{"id":"https://openalex.org/W3004901237","doi":"https://doi.org/10.1109/bibm47256.2019.8983320","title":"A Systematic Framework for Drug Repurposing based on Literature Mining","display_name":"A Systematic Framework for Drug Repurposing based on Literature Mining","publication_year":2019,"publication_date":"2019-11-01","ids":{"openalex":"https://openalex.org/W3004901237","doi":"https://doi.org/10.1109/bibm47256.2019.8983320","mag":"3004901237"},"language":"en","primary_location":{"id":"doi:10.1109/bibm47256.2019.8983320","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibm47256.2019.8983320","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2019 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5055828424","display_name":"Gaocai Dong","orcid":null},"institutions":[{"id":"https://openalex.org/I196699116","display_name":"Wuhan University of Technology","ror":"https://ror.org/03fe7t173","country_code":"CN","type":"education","lineage":["https://openalex.org/I196699116"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Gaocai Dong","raw_affiliation_strings":["School of Computer Science and Technology, Wuhan University of Technology, Wuhan, China"],"affiliations":[{"raw_affiliation_string":"School of Computer Science and Technology, Wuhan University of Technology, Wuhan, China","institution_ids":["https://openalex.org/I196699116"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5050360222","display_name":"Ping Zhang","orcid":"https://orcid.org/0000-0002-4601-0779"},"institutions":[{"id":"https://openalex.org/I52357470","display_name":"The Ohio State University","ror":"https://ror.org/00rs6vg23","country_code":"US","type":"education","lineage":["https://openalex.org/I52357470"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Ping Zhang","raw_affiliation_strings":["Department of Computer Science and Engineering, The Ohio State University, Columbus, USA"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, The Ohio State University, Columbus, USA","institution_ids":["https://openalex.org/I52357470"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5001860571","display_name":"Jingya Yang","orcid":"https://orcid.org/0000-0002-7419-5133"},"institutions":[{"id":"https://openalex.org/I196699116","display_name":"Wuhan University of Technology","ror":"https://ror.org/03fe7t173","country_code":"CN","type":"education","lineage":["https://openalex.org/I196699116"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jingya Yang","raw_affiliation_strings":["School of Computer Science and Technology, Wuhan University of Technology, Wuhan, China"],"affiliations":[{"raw_affiliation_string":"School of Computer Science and Technology, Wuhan University of Technology, Wuhan, China","institution_ids":["https://openalex.org/I196699116"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100416380","display_name":"Dongdong Zhang","orcid":"https://orcid.org/0000-0002-8619-2140"},"institutions":[{"id":"https://openalex.org/I52357470","display_name":"The Ohio State University","ror":"https://ror.org/00rs6vg23","country_code":"US","type":"education","lineage":["https://openalex.org/I52357470"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Dongdong Zhang","raw_affiliation_strings":["Department of Biomedical Informatics, The Ohio State University, Columbus, USA"],"affiliations":[{"raw_affiliation_string":"Department of Biomedical Informatics, The Ohio State University, Columbus, USA","institution_ids":["https://openalex.org/I52357470"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5101667957","display_name":"Jing Peng","orcid":"https://orcid.org/0000-0003-2762-7148"},"institutions":[{"id":"https://openalex.org/I196699116","display_name":"Wuhan University of Technology","ror":"https://ror.org/03fe7t173","country_code":"CN","type":"education","lineage":["https://openalex.org/I196699116"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jing Peng","raw_affiliation_strings":["School of Computer Science and Technology, Wuhan University of Technology, Wuhan, China"],"affiliations":[{"raw_affiliation_string":"School of Computer Science and Technology, Wuhan University of Technology, Wuhan, China","institution_ids":["https://openalex.org/I196699116"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5055828424"],"corresponding_institution_ids":["https://openalex.org/I196699116"],"apc_list":null,"apc_paid":null,"fwci":0.341,"has_fulltext":false,"cited_by_count":4,"citation_normalized_percentile":{"value":0.60167881,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":97},"biblio":{"volume":null,"issue":null,"first_page":"939","last_page":"942"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.9868000149726868,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T13083","display_name":"Advanced Text Analysis Techniques","score":0.9835000038146973,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/repurposing","display_name":"Repurposing","score":0.7503346800804138},{"id":"https://openalex.org/keywords/drug-repositioning","display_name":"Drug repositioning","score":0.636156439781189},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6126751899719238},{"id":"https://openalex.org/keywords/drug","display_name":"Drug","score":0.3803758919239044},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.3432217836380005},{"id":"https://openalex.org/keywords/engineering","display_name":"Engineering","score":0.17610326409339905},{"id":"https://openalex.org/keywords/pharmacology","display_name":"Pharmacology","score":0.11252027750015259},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.10012844204902649}],"concepts":[{"id":"https://openalex.org/C519536355","wikidata":"https://www.wikidata.org/wiki/Q21021151","display_name":"Repurposing","level":2,"score":0.7503346800804138},{"id":"https://openalex.org/C103637391","wikidata":"https://www.wikidata.org/wiki/Q5308921","display_name":"Drug repositioning","level":3,"score":0.636156439781189},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6126751899719238},{"id":"https://openalex.org/C2780035454","wikidata":"https://www.wikidata.org/wiki/Q8386","display_name":"Drug","level":2,"score":0.3803758919239044},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.3432217836380005},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.17610326409339905},{"id":"https://openalex.org/C98274493","wikidata":"https://www.wikidata.org/wiki/Q128406","display_name":"Pharmacology","level":1,"score":0.11252027750015259},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.10012844204902649},{"id":"https://openalex.org/C548081761","wikidata":"https://www.wikidata.org/wiki/Q180388","display_name":"Waste management","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/bibm47256.2019.8983320","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibm47256.2019.8983320","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2019 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[{"score":0.75,"id":"https://metadata.un.org/sdg/3","display_name":"Good health and well-being"}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":14,"referenced_works":["https://openalex.org/W104021040","https://openalex.org/W128719466","https://openalex.org/W1832693441","https://openalex.org/W2004910511","https://openalex.org/W2013770071","https://openalex.org/W2029342376","https://openalex.org/W2093313266","https://openalex.org/W2112946624","https://openalex.org/W2121111666","https://openalex.org/W2206818767","https://openalex.org/W2502366096","https://openalex.org/W2767891136","https://openalex.org/W6604218610","https://openalex.org/W6605288046"],"related_works":["https://openalex.org/W2899096130","https://openalex.org/W3190782215","https://openalex.org/W2902729297","https://openalex.org/W3110500039","https://openalex.org/W4255531208","https://openalex.org/W4206422705","https://openalex.org/W4320009247","https://openalex.org/W3186872001","https://openalex.org/W3174741986","https://openalex.org/W4389861022"],"abstract_inverted_index":{"Drug":[0],"repurposing,":[1],"referring":[2],"to":[3,24,69,85,109],"the":[4,51,89,92,96,103,121],"discovery":[5],"of":[6,18,105],"new":[7,44],"indications":[8],"for":[9,46,123],"an":[10,15],"existing":[11,30],"drug,":[12],"has":[13,42],"become":[14],"important":[16],"aspect":[17],"drug":[19,41,57,76,90,124],"development.":[20],"This":[21],"study":[22],"seeks":[23],"extract":[25],"hidden":[26,115],"disease-drug":[27,116],"associations":[28,117],"from":[29],"literature.":[31],"Specifically,":[32],"we":[33,65,79],"propose":[34],"a":[35,40,43,47,81],"systematic":[36],"framework":[37],"assuming":[38],"that":[39],"use":[45,80],"certain":[48],"disease":[49,53,72,93],"if":[50],"clinical":[52,56,71,75],"symptoms":[54,73],"and":[55,74],"effects":[58],"complement":[59],"each":[60],"other.":[61],"Via":[62],"literature":[63],"mining,":[64],"generate":[66],"two":[67],"vectors":[68],"describe":[70],"effects.":[77],"Then":[78],"logistic":[82],"regression":[83],"model":[84],"predict":[86],"how":[87],"effectively":[88],"counteracts":[91],"based":[94],"on":[95],"generated":[97],"disease/drug":[98],"vectors.":[99],"Comprehensive":[100],"experiments":[101],"show":[102],"effectiveness":[104],"proposed":[106],"framework.":[107],"According":[108],"our":[110],"results,":[111],"there":[112],"are":[113],"many":[114],"which":[118],"can":[119],"be":[120],"candidates":[122],"repurposing.":[125]},"counts_by_year":[{"year":2021,"cited_by_count":3},{"year":2020,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
