{"id":"https://openalex.org/W3004954712","doi":"https://doi.org/10.1109/bibm47256.2019.8983142","title":"Question Answering based Clinical Text Structuring Using Pre-trained Language Model","display_name":"Question Answering based Clinical Text Structuring Using Pre-trained Language Model","publication_year":2019,"publication_date":"2019-11-01","ids":{"openalex":"https://openalex.org/W3004954712","doi":"https://doi.org/10.1109/bibm47256.2019.8983142","mag":"3004954712"},"language":"en","primary_location":{"id":"doi:10.1109/bibm47256.2019.8983142","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibm47256.2019.8983142","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2019 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5045253161","display_name":"Jiahui Qiu","orcid":"https://orcid.org/0000-0003-4795-5536"},"institutions":[{"id":"https://openalex.org/I143593769","display_name":"East China University of Science and Technology","ror":"https://ror.org/01vyrm377","country_code":"CN","type":"education","lineage":["https://openalex.org/I143593769"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Jiahui Qiu","raw_affiliation_strings":["School of Information Science and Engineering, East China University of Science and Technology, Shanghai, China"],"affiliations":[{"raw_affiliation_string":"School of Information Science and Engineering, East China University of Science and Technology, Shanghai, China","institution_ids":["https://openalex.org/I143593769"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5071839367","display_name":"Yangming Zhou","orcid":"https://orcid.org/0000-0002-4254-6517"},"institutions":[{"id":"https://openalex.org/I143593769","display_name":"East China University of Science and Technology","ror":"https://ror.org/01vyrm377","country_code":"CN","type":"education","lineage":["https://openalex.org/I143593769"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yangming Zhou","raw_affiliation_strings":["School of Information Science and Engineering, East China University of Science and Technology, Shanghai, China"],"affiliations":[{"raw_affiliation_string":"School of Information Science and Engineering, East China University of Science and Technology, Shanghai, China","institution_ids":["https://openalex.org/I143593769"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100622932","display_name":"Zhiyuan Ma","orcid":"https://orcid.org/0000-0003-2153-5824"},"institutions":[{"id":"https://openalex.org/I143593769","display_name":"East China University of Science and Technology","ror":"https://ror.org/01vyrm377","country_code":"CN","type":"education","lineage":["https://openalex.org/I143593769"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zhiyuan Ma","raw_affiliation_strings":["School of Information Science and Engineering, East China University of Science and Technology, Shanghai, China"],"affiliations":[{"raw_affiliation_string":"School of Information Science and Engineering, East China University of Science and Technology, Shanghai, China","institution_ids":["https://openalex.org/I143593769"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5005820786","display_name":"Tong Ruan","orcid":"https://orcid.org/0000-0002-3546-8338"},"institutions":[{"id":"https://openalex.org/I143593769","display_name":"East China University of Science and Technology","ror":"https://ror.org/01vyrm377","country_code":"CN","type":"education","lineage":["https://openalex.org/I143593769"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Tong Ruan","raw_affiliation_strings":["School of Information Science and Engineering, East China University of Science and Technology, Shanghai, China"],"affiliations":[{"raw_affiliation_string":"School of Information Science and Engineering, East China University of Science and Technology, Shanghai, China","institution_ids":["https://openalex.org/I143593769"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100654056","display_name":"Jinlin Liu","orcid":"https://orcid.org/0000-0002-9761-5831"},"institutions":[{"id":"https://openalex.org/I143593769","display_name":"East China University of Science and Technology","ror":"https://ror.org/01vyrm377","country_code":"CN","type":"education","lineage":["https://openalex.org/I143593769"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jinlin Liu","raw_affiliation_strings":["School of Information Science and Engineering, East China University of Science and Technology, Shanghai, China"],"affiliations":[{"raw_affiliation_string":"School of Information Science and Engineering, East China University of Science and Technology, Shanghai, China","institution_ids":["https://openalex.org/I143593769"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5100617611","display_name":"Jing Sun","orcid":"https://orcid.org/0000-0002-2623-0037"},"institutions":[{"id":"https://openalex.org/I183067930","display_name":"Shanghai Jiao Tong University","ror":"https://ror.org/0220qvk04","country_code":"CN","type":"education","lineage":["https://openalex.org/I183067930"]},{"id":"https://openalex.org/I2801556517","display_name":"Ruijin Hospital","ror":"https://ror.org/01hv94n30","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I2801556517"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jing Sun","raw_affiliation_strings":["Ruijin Hospital, School of Medicine, Shanghai Jiao Tong University, Shanghai, China"],"affiliations":[{"raw_affiliation_string":"Ruijin Hospital, School of Medicine, Shanghai Jiao Tong University, Shanghai, China","institution_ids":["https://openalex.org/I2801556517","https://openalex.org/I183067930"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5045253161"],"corresponding_institution_ids":["https://openalex.org/I143593769"],"apc_list":null,"apc_paid":null,"fwci":0.14,"has_fulltext":false,"cited_by_count":3,"citation_normalized_percentile":{"value":0.60036656,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":94},"biblio":{"volume":"4","issue":null,"first_page":"1596","last_page":"1600"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10181","display_name":"Natural Language Processing Techniques","score":0.9983000159263611,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.996399998664856,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/structuring","display_name":"Structuring","score":0.8948742151260376},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.849923849105835},{"id":"https://openalex.org/keywords/task","display_name":"Task (project management)","score":0.7658728957176208},{"id":"https://openalex.org/keywords/pipeline","display_name":"Pipeline (software)","score":0.7102357149124146},{"id":"https://openalex.org/keywords/language-model","display_name":"Language model","score":0.648577868938446},{"id":"https://openalex.org/keywords/natural-language-processing","display_name":"Natural language processing","score":0.5839394330978394},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.5836984515190125},{"id":"https://openalex.org/keywords/question-answering","display_name":"Question answering","score":0.5579034090042114},{"id":"https://openalex.org/keywords/domain","display_name":"Domain (mathematical analysis)","score":0.4880887269973755},{"id":"https://openalex.org/keywords/baseline","display_name":"Baseline (sea)","score":0.48201051354408264},{"id":"https://openalex.org/keywords/task-analysis","display_name":"Task analysis","score":0.4695212244987488},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.3659821152687073},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.3343353271484375},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.07792821526527405}],"concepts":[{"id":"https://openalex.org/C2775945657","wikidata":"https://www.wikidata.org/wiki/Q381442","display_name":"Structuring","level":2,"score":0.8948742151260376},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.849923849105835},{"id":"https://openalex.org/C2780451532","wikidata":"https://www.wikidata.org/wiki/Q759676","display_name":"Task (project management)","level":2,"score":0.7658728957176208},{"id":"https://openalex.org/C43521106","wikidata":"https://www.wikidata.org/wiki/Q2165493","display_name":"Pipeline (software)","level":2,"score":0.7102357149124146},{"id":"https://openalex.org/C137293760","wikidata":"https://www.wikidata.org/wiki/Q3621696","display_name":"Language model","level":2,"score":0.648577868938446},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.5839394330978394},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5836984515190125},{"id":"https://openalex.org/C44291984","wikidata":"https://www.wikidata.org/wiki/Q1074173","display_name":"Question answering","level":2,"score":0.5579034090042114},{"id":"https://openalex.org/C36503486","wikidata":"https://www.wikidata.org/wiki/Q11235244","display_name":"Domain (mathematical analysis)","level":2,"score":0.4880887269973755},{"id":"https://openalex.org/C12725497","wikidata":"https://www.wikidata.org/wiki/Q810247","display_name":"Baseline (sea)","level":2,"score":0.48201051354408264},{"id":"https://openalex.org/C175154964","wikidata":"https://www.wikidata.org/wiki/Q380077","display_name":"Task analysis","level":3,"score":0.4695212244987488},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.3659821152687073},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.3343353271484375},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.07792821526527405},{"id":"https://openalex.org/C187736073","wikidata":"https://www.wikidata.org/wiki/Q2920921","display_name":"Management","level":1,"score":0.0},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0},{"id":"https://openalex.org/C111368507","wikidata":"https://www.wikidata.org/wiki/Q43518","display_name":"Oceanography","level":1,"score":0.0},{"id":"https://openalex.org/C10138342","wikidata":"https://www.wikidata.org/wiki/Q43015","display_name":"Finance","level":1,"score":0.0},{"id":"https://openalex.org/C127313418","wikidata":"https://www.wikidata.org/wiki/Q1069","display_name":"Geology","level":0,"score":0.0},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/bibm47256.2019.8983142","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibm47256.2019.8983142","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2019 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/4","score":0.7599999904632568,"display_name":"Quality Education"}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":30,"referenced_works":["https://openalex.org/W1592053870","https://openalex.org/W1724588178","https://openalex.org/W2104657103","https://openalex.org/W2269884822","https://openalex.org/W2292220633","https://openalex.org/W2335596446","https://openalex.org/W2475287302","https://openalex.org/W2522925822","https://openalex.org/W2548245259","https://openalex.org/W2613763509","https://openalex.org/W2767344512","https://openalex.org/W2798858969","https://openalex.org/W2896457183","https://openalex.org/W2911489562","https://openalex.org/W2913944320","https://openalex.org/W2928222247","https://openalex.org/W2931252866","https://openalex.org/W2936894186","https://openalex.org/W2948909602","https://openalex.org/W2953384591","https://openalex.org/W2962739339","https://openalex.org/W2963341956","https://openalex.org/W2963571188","https://openalex.org/W2963748441","https://openalex.org/W2970597249","https://openalex.org/W4295253143","https://openalex.org/W6635275303","https://openalex.org/W6694016796","https://openalex.org/W6713134421","https://openalex.org/W6759137040"],"related_works":["https://openalex.org/W4394443292","https://openalex.org/W4251394462","https://openalex.org/W1580673008","https://openalex.org/W1510936208","https://openalex.org/W2486167009","https://openalex.org/W1595575899","https://openalex.org/W4288267738","https://openalex.org/W2964413124","https://openalex.org/W4388937922","https://openalex.org/W3113264705"],"abstract_inverted_index":{"Clinical":[0],"text":[1,42],"structuring":[2,43],"is":[3,74,95],"a":[4,37],"critical":[5],"and":[6,19,29,52],"fundamental":[7],"task":[8,45,94],"for":[9,77],"clinical":[10,41,66],"research.":[11],"Traditional":[12],"methods":[13],"such":[14],"as":[15],"task-specific":[16],"end-to-end":[17],"models":[18,21,114],"pipeline":[20],"usually":[22],"suffer":[23],"from":[24,87],"the":[25,100],"lack":[26],"of":[27],"dataset":[28,54],"error":[30],"propagation.":[31],"In":[32],"this":[33],"paper,":[34],"we":[35],"present":[36],"question":[38],"answering":[39],"based":[40],"(QA-CTS)":[44],"to":[46,61,98],"unify":[47],"different":[48],"specific":[49,103,116],"CTS":[50],"tasks":[51],"make":[53],"shareable.":[55],"A":[56],"novel":[57],"model":[58,73,107],"that":[59],"aims":[60],"introduce":[62],"domain-specific":[63],"features":[64],"(e.g.,":[65],"named":[67],"entity":[68],"information)":[69],"into":[70],"pre-trained":[71],"language":[72],"also":[75,108],"proposed":[76,106],"QA-CTS":[78,93],"task.":[79],"Experimental":[80],"results":[81],"on":[82,102],"Chinese":[83],"pathology":[84],"reports":[85],"collected":[86],"Ruijing":[88],"Hospital":[89],"demonstrate":[90],"our":[91],"presented":[92],"very":[96],"effective":[97],"improve":[99],"performance":[101],"tasks.":[104,117],"Our":[105],"competes":[109],"favorably":[110],"with":[111],"strong":[112],"baseline":[113],"in":[115]},"counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
