{"id":"https://openalex.org/W2912471401","doi":"https://doi.org/10.1109/bibm.2018.8621568","title":"Constructing Biomedical Knowledge Graph Based on SemMedDB and Linked Open Data","display_name":"Constructing Biomedical Knowledge Graph Based on SemMedDB and Linked Open Data","publication_year":2018,"publication_date":"2018-12-01","ids":{"openalex":"https://openalex.org/W2912471401","doi":"https://doi.org/10.1109/bibm.2018.8621568","mag":"2912471401"},"language":"en","primary_location":{"id":"doi:10.1109/bibm.2018.8621568","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibm.2018.8621568","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2018 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5026919137","display_name":"Qing Cong","orcid":"https://orcid.org/0000-0002-4492-9052"},"institutions":[{"id":"https://openalex.org/I162868743","display_name":"Tianjin University","ror":"https://ror.org/012tb2g32","country_code":"CN","type":"education","lineage":["https://openalex.org/I162868743"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Qing Cong","raw_affiliation_strings":["College of Intelligence and Computing, Tianjin University, Tianjin, China"],"affiliations":[{"raw_affiliation_string":"College of Intelligence and Computing, Tianjin University, Tianjin, China","institution_ids":["https://openalex.org/I162868743"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100736532","display_name":"Zhiyong Feng","orcid":"https://orcid.org/0000-0001-8158-7453"},"institutions":[{"id":"https://openalex.org/I162868743","display_name":"Tianjin University","ror":"https://ror.org/012tb2g32","country_code":"CN","type":"education","lineage":["https://openalex.org/I162868743"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zhiyong Feng","raw_affiliation_strings":["College of Intelligence and Computing, Tianjin University, Tianjin, China"],"affiliations":[{"raw_affiliation_string":"College of Intelligence and Computing, Tianjin University, Tianjin, China","institution_ids":["https://openalex.org/I162868743"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100394163","display_name":"Fang Li","orcid":"https://orcid.org/0000-0001-8865-7717"},"institutions":[{"id":"https://openalex.org/I919571938","display_name":"The University of Texas Health Science Center at Houston","ror":"https://ror.org/03gds6c39","country_code":"US","type":"education","lineage":["https://openalex.org/I919571938"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Fang Li","raw_affiliation_strings":["School of Biomedical Informatics, University of Texas Health Science Center at Houston, Houston, TX, USA"],"affiliations":[{"raw_affiliation_string":"School of Biomedical Informatics, University of Texas Health Science Center at Houston, Houston, TX, USA","institution_ids":["https://openalex.org/I919571938"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100425535","display_name":"Li Zhang","orcid":"https://orcid.org/0000-0002-3039-6160"},"institutions":[{"id":"https://openalex.org/I132369690","display_name":"Tianjin University of Science and Technology","ror":"https://ror.org/018rbtf37","country_code":"CN","type":"education","lineage":["https://openalex.org/I132369690"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Li Zhang","raw_affiliation_strings":["School of Economics and Management, Tianjin University of Science and Technology, Tianjin, China"],"affiliations":[{"raw_affiliation_string":"School of Economics and Management, Tianjin University of Science and Technology, Tianjin, China","institution_ids":["https://openalex.org/I132369690"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5029977488","display_name":"Guozheng Rao","orcid":"https://orcid.org/0000-0002-6261-576X"},"institutions":[{"id":"https://openalex.org/I162868743","display_name":"Tianjin University","ror":"https://ror.org/012tb2g32","country_code":"CN","type":"education","lineage":["https://openalex.org/I162868743"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Guozheng Rao","raw_affiliation_strings":["College of Intelligence and Computing, Tianjin University, Tianjin, China"],"affiliations":[{"raw_affiliation_string":"College of Intelligence and Computing, Tianjin University, Tianjin, China","institution_ids":["https://openalex.org/I162868743"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5076058129","display_name":"Cui Tao","orcid":"https://orcid.org/0000-0002-4267-1924"},"institutions":[{"id":"https://openalex.org/I919571938","display_name":"The University of Texas Health Science Center at Houston","ror":"https://ror.org/03gds6c39","country_code":"US","type":"education","lineage":["https://openalex.org/I919571938"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Cui Tao","raw_affiliation_strings":["School of Biomedical Informatics, University of Texas Health Science Center at Houston, Houston, TX, USA"],"affiliations":[{"raw_affiliation_string":"School of Biomedical Informatics, University of Texas Health Science Center at Houston, Houston, TX, USA","institution_ids":["https://openalex.org/I919571938"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5026919137"],"corresponding_institution_ids":["https://openalex.org/I162868743"],"apc_list":null,"apc_paid":null,"fwci":0.8345,"has_fulltext":false,"cited_by_count":25,"citation_normalized_percentile":{"value":0.73296633,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":91,"max":99},"biblio":{"volume":null,"issue":null,"first_page":"1628","last_page":"1631"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9969000220298767,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10215","display_name":"Semantic Web and Ontologies","score":0.9965000152587891,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7903735637664795},{"id":"https://openalex.org/keywords/knowledge-graph","display_name":"Knowledge graph","score":0.6808030009269714},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.620136022567749},{"id":"https://openalex.org/keywords/task","display_name":"Task (project management)","score":0.5960520505905151},{"id":"https://openalex.org/keywords/linked-data","display_name":"Linked data","score":0.5400387644767761},{"id":"https://openalex.org/keywords/quality","display_name":"Quality (philosophy)","score":0.5082947611808777},{"id":"https://openalex.org/keywords/knowledge-extraction","display_name":"Knowledge extraction","score":0.48694050312042236},{"id":"https://openalex.org/keywords/data-curation","display_name":"Data curation","score":0.4660182297229767},{"id":"https://openalex.org/keywords/graph","display_name":"Graph","score":0.426340252161026},{"id":"https://openalex.org/keywords/data-quality","display_name":"Data quality","score":0.4176325798034668},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.35171371698379517},{"id":"https://openalex.org/keywords/semantic-web","display_name":"Semantic Web","score":0.3110877275466919},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.255668580532074},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.08766332268714905}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7903735637664795},{"id":"https://openalex.org/C2987255567","wikidata":"https://www.wikidata.org/wiki/Q33002955","display_name":"Knowledge graph","level":2,"score":0.6808030009269714},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.620136022567749},{"id":"https://openalex.org/C2780451532","wikidata":"https://www.wikidata.org/wiki/Q759676","display_name":"Task (project management)","level":2,"score":0.5960520505905151},{"id":"https://openalex.org/C69075417","wikidata":"https://www.wikidata.org/wiki/Q515701","display_name":"Linked data","level":3,"score":0.5400387644767761},{"id":"https://openalex.org/C2779530757","wikidata":"https://www.wikidata.org/wiki/Q1207505","display_name":"Quality (philosophy)","level":2,"score":0.5082947611808777},{"id":"https://openalex.org/C120567893","wikidata":"https://www.wikidata.org/wiki/Q1582085","display_name":"Knowledge extraction","level":2,"score":0.48694050312042236},{"id":"https://openalex.org/C91632574","wikidata":"https://www.wikidata.org/wiki/Q15088675","display_name":"Data curation","level":2,"score":0.4660182297229767},{"id":"https://openalex.org/C132525143","wikidata":"https://www.wikidata.org/wiki/Q141488","display_name":"Graph","level":2,"score":0.426340252161026},{"id":"https://openalex.org/C24756922","wikidata":"https://www.wikidata.org/wiki/Q1757694","display_name":"Data quality","level":3,"score":0.4176325798034668},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.35171371698379517},{"id":"https://openalex.org/C2129575","wikidata":"https://www.wikidata.org/wiki/Q54837","display_name":"Semantic Web","level":2,"score":0.3110877275466919},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.255668580532074},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.08766332268714905},{"id":"https://openalex.org/C176217482","wikidata":"https://www.wikidata.org/wiki/Q860554","display_name":"Metric (unit)","level":2,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C21547014","wikidata":"https://www.wikidata.org/wiki/Q1423657","display_name":"Operations management","level":1,"score":0.0},{"id":"https://openalex.org/C187736073","wikidata":"https://www.wikidata.org/wiki/Q2920921","display_name":"Management","level":1,"score":0.0},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/bibm.2018.8621568","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibm.2018.8621568","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2018 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[{"display_name":"Decent work and economic growth","score":0.550000011920929,"id":"https://metadata.un.org/sdg/8"}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":18,"referenced_works":["https://openalex.org/W1538085078","https://openalex.org/W1608124137","https://openalex.org/W2021366071","https://openalex.org/W2098201295","https://openalex.org/W2103427999","https://openalex.org/W2117446654","https://openalex.org/W2196234005","https://openalex.org/W2250093878","https://openalex.org/W2341574236","https://openalex.org/W2587223734","https://openalex.org/W2606363764","https://openalex.org/W2620710997","https://openalex.org/W2735585131","https://openalex.org/W2791033809","https://openalex.org/W2805208465","https://openalex.org/W2892229719","https://openalex.org/W6636514781","https://openalex.org/W6675616163"],"related_works":["https://openalex.org/W2701062589","https://openalex.org/W4308914582","https://openalex.org/W4292070284","https://openalex.org/W4319071221","https://openalex.org/W4313174091","https://openalex.org/W3204333189","https://openalex.org/W2151834574","https://openalex.org/W4308231464","https://openalex.org/W2407679073","https://openalex.org/W4313219769"],"abstract_inverted_index":{"Biomedical":[0],"knowledge":[1,41,165],"graphs":[2],"(BMKGs),":[3],"which":[4,55],"may":[5,79],"facilitate":[6,163],"precision":[7],"medicine":[8],"and":[9,16,22,33,39,59,106,148,162],"clinical":[10],"decision":[11],"support,":[12],"have":[13],"become":[14],"more":[15,17],"important":[18],"in":[19,30,118],"healthcare":[20],"practice":[21],"research.":[23],"A":[24],"lot":[25],"of":[26,44,48,71,77,126,133,160],"challenges":[27],"still":[28],"remain":[29],"their":[31],"construction":[32],"curation":[34],"due":[35],"to":[36,99,156],"the":[37,45,49,69,72,85,104,115,119,158],"complex":[38],"high":[40],"demanding":[42],"nature":[43],"task.":[46],"Most":[47],"current":[50],"BMKGs":[51],"are":[52,62],"manually":[53],"compiled,":[54],"is":[56],"particularly":[57],"time-consuming":[58],"labor-intensive.":[60],"Some":[61],"automatically":[63],"generated":[64],"but":[65],"rely":[66],"heavily":[67],"on":[68],"quality":[70,159],"source":[73],"data.":[74],"Furthermore,":[75],"most":[76,86],"them":[78],"not":[80],"fully":[81],"integrate":[82],"or":[83],"represent":[84],"recent":[87],"biomedical":[88],"advancement.":[89],"To":[90],"tackle":[91],"these":[92],"problems,":[93],"we":[94,121,139],"propose":[95],"a":[96,101,153],"novel":[97],"approach":[98],"building":[100],"BMKG":[102],"leveraging":[103],"SemMedDB":[105,161],"Health":[107],"Science":[108],"Linked":[109],"Open":[110],"Data":[111],"(LOD).":[112],"Carefully":[113],"checking":[114],"inconsistent":[116],"predications":[117],"SemMedDB,":[120],"detected":[122],"462,188":[123],"conflicting":[124],"pairs":[125],"semantic":[127,134],"triples.":[128],"What's":[129],"more,":[130],"further":[131],"mining":[132],"relationships":[135,144],"among":[136],"different":[137],"datasets,":[138],"found":[140],"over":[141],"30":[142],"new":[143,154],"linking":[145],"disorders,":[146],"genes":[147],"drugs.":[149],"Our":[150],"methods":[151],"explore":[152],"way":[155],"improve":[157],"BMKGs-based":[164],"discovery.":[166]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":4},{"year":2023,"cited_by_count":6},{"year":2022,"cited_by_count":4},{"year":2020,"cited_by_count":7},{"year":2019,"cited_by_count":2}],"updated_date":"2026-03-08T08:50:53.379069","created_date":"2025-10-10T00:00:00"}
