{"id":"https://openalex.org/W2912576237","doi":"https://doi.org/10.1109/bibm.2018.8621452","title":"Recognising Named Entity of Medical Imaging Procedures in Clinical Notes","display_name":"Recognising Named Entity of Medical Imaging Procedures in Clinical Notes","publication_year":2018,"publication_date":"2018-12-01","ids":{"openalex":"https://openalex.org/W2912576237","doi":"https://doi.org/10.1109/bibm.2018.8621452","mag":"2912576237"},"language":"en","primary_location":{"id":"doi:10.1109/bibm.2018.8621452","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibm.2018.8621452","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2018 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5086385122","display_name":"Ruan Wei","orcid":"https://orcid.org/0009-0007-0046-9254"},"institutions":[{"id":"https://openalex.org/I153718931","display_name":"University of Ottawa","ror":"https://ror.org/03c4mmv16","country_code":"CA","type":"education","lineage":["https://openalex.org/I153718931"]}],"countries":["CA"],"is_corresponding":true,"raw_author_name":"Wei Ruan","raw_affiliation_strings":["School of Electrical Engineering and Computer Science (EECS), University of Ottawa, Ottawa, Canada"],"affiliations":[{"raw_affiliation_string":"School of Electrical Engineering and Computer Science (EECS), University of Ottawa, Ottawa, Canada","institution_ids":["https://openalex.org/I153718931"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5063382504","display_name":"Won\u2010Sook Lee","orcid":"https://orcid.org/0000-0003-3024-3081"},"institutions":[{"id":"https://openalex.org/I153718931","display_name":"University of Ottawa","ror":"https://ror.org/03c4mmv16","country_code":"CA","type":"education","lineage":["https://openalex.org/I153718931"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Won-sook Lee","raw_affiliation_strings":["School of Electrical Engineering and Computer Science (EECS), University of Ottawa, Ottawa, Canada"],"affiliations":[{"raw_affiliation_string":"School of Electrical Engineering and Computer Science (EECS), University of Ottawa, Ottawa, Canada","institution_ids":["https://openalex.org/I153718931"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5086385122"],"corresponding_institution_ids":["https://openalex.org/I153718931"],"apc_list":null,"apc_paid":null,"fwci":0.1629,"has_fulltext":false,"cited_by_count":4,"citation_normalized_percentile":{"value":0.61645606,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":95},"biblio":{"volume":null,"issue":null,"first_page":"743","last_page":"746"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.9980000257492065,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.9980000257492065,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.986299991607666,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12422","display_name":"Radiomics and Machine Learning in Medical Imaging","score":0.9767000079154968,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6418837308883667},{"id":"https://openalex.org/keywords/natural-language-processing","display_name":"Natural language processing","score":0.5877681970596313},{"id":"https://openalex.org/keywords/conditional-random-field","display_name":"Conditional random field","score":0.5828530192375183},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.5614430904388428},{"id":"https://openalex.org/keywords/medical-imaging","display_name":"Medical imaging","score":0.5235751867294312},{"id":"https://openalex.org/keywords/word","display_name":"Word (group theory)","score":0.4725862741470337},{"id":"https://openalex.org/keywords/process","display_name":"Process (computing)","score":0.46662724018096924},{"id":"https://openalex.org/keywords/named-entity-recognition","display_name":"Named-entity recognition","score":0.4637523293495178},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.44155967235565186},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.15934088826179504},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.1296742558479309},{"id":"https://openalex.org/keywords/engineering","display_name":"Engineering","score":0.08494812250137329}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6418837308883667},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.5877681970596313},{"id":"https://openalex.org/C152565575","wikidata":"https://www.wikidata.org/wiki/Q1124538","display_name":"Conditional random field","level":2,"score":0.5828530192375183},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5614430904388428},{"id":"https://openalex.org/C31601959","wikidata":"https://www.wikidata.org/wiki/Q931309","display_name":"Medical imaging","level":2,"score":0.5235751867294312},{"id":"https://openalex.org/C90805587","wikidata":"https://www.wikidata.org/wiki/Q10944557","display_name":"Word (group theory)","level":2,"score":0.4725862741470337},{"id":"https://openalex.org/C98045186","wikidata":"https://www.wikidata.org/wiki/Q205663","display_name":"Process (computing)","level":2,"score":0.46662724018096924},{"id":"https://openalex.org/C2779135771","wikidata":"https://www.wikidata.org/wiki/Q403574","display_name":"Named-entity recognition","level":3,"score":0.4637523293495178},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.44155967235565186},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.15934088826179504},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.1296742558479309},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.08494812250137329},{"id":"https://openalex.org/C201995342","wikidata":"https://www.wikidata.org/wiki/Q682496","display_name":"Systems engineering","level":1,"score":0.0},{"id":"https://openalex.org/C2780451532","wikidata":"https://www.wikidata.org/wiki/Q759676","display_name":"Task (project management)","level":2,"score":0.0},{"id":"https://openalex.org/C2524010","wikidata":"https://www.wikidata.org/wiki/Q8087","display_name":"Geometry","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/bibm.2018.8621452","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibm.2018.8621452","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2018 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[{"display_name":"Quality Education","id":"https://metadata.un.org/sdg/4","score":0.6399999856948853}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":18,"referenced_works":["https://openalex.org/W23757268","https://openalex.org/W1529355025","https://openalex.org/W1996430422","https://openalex.org/W2003458432","https://openalex.org/W2041998362","https://openalex.org/W2045993505","https://openalex.org/W2048468185","https://openalex.org/W2085932143","https://openalex.org/W2114668172","https://openalex.org/W2141099517","https://openalex.org/W2147880316","https://openalex.org/W2150944609","https://openalex.org/W2158188757","https://openalex.org/W2330149175","https://openalex.org/W2886305294","https://openalex.org/W6600985830","https://openalex.org/W6631608000","https://openalex.org/W6683226453"],"related_works":["https://openalex.org/W4250494529","https://openalex.org/W1964783010","https://openalex.org/W2399696375","https://openalex.org/W45206245","https://openalex.org/W2211396092","https://openalex.org/W2061834489","https://openalex.org/W2751906762","https://openalex.org/W3088215229","https://openalex.org/W2078793151","https://openalex.org/W2886890203"],"abstract_inverted_index":{"Information":[0],"on":[1,33,53,92],"medical":[2,27,72,85],"imaging":[3,28,73],"procedures":[4],"in":[5,13],"free-text":[6],"clinical":[7],"notes":[8],"plays":[9],"a":[10,22,54],"significant":[11],"role":[12],"help":[14],"diagnosis":[15],"process.":[16],"In":[17],"this":[18],"paper,":[19],"we":[20],"present":[21],"named":[23,86],"entity":[24],"of":[25],"the":[26,61,96],"procedure":[29,74],"recognition":[30,94],"system":[31,48,77],"based":[32],"conditional":[34],"random":[35],"fields":[36],"(CRF)":[37],"model":[38],"with":[39,60,95],"word-based,":[40],"part-of-speech,":[41],"Metamap":[42],"semantic":[43],"and":[44,51],"et.al":[45],"features.":[46],"The":[47],"is":[49],"trained":[50],"tested":[52],"manually":[55],"labelled":[56],"dataset":[57],"from":[58,102],"I2B2":[59],"F":[62,97],"<sub":[63,98],"xmlns:mml=\"http://www.w3.org/1998/Math/MathML\"":[64,99],"xmlns:xlink=\"http://www.w3.org/1999/xlink\">1</sub>":[65,100],"score":[66,101],"up":[67],"to":[68,104],"0.923":[69],"for":[70],"recognizing":[71],"entities.":[75],"Our":[76],"can":[78],"be":[79],"customized":[80],"by":[81],"simply":[82],"defining":[83],"new":[84],"entities,":[87],"which":[88],"has":[89],"been":[90],"proved":[91],"medication":[93],"0.870":[103],"0.937.":[105]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
