{"id":"https://openalex.org/W2911611059","doi":"https://doi.org/10.1109/bibm.2018.8621441","title":"LncRNA-disease association prediction based on neighborhood information aggregation in neural network","display_name":"LncRNA-disease association prediction based on neighborhood information aggregation in neural network","publication_year":2018,"publication_date":"2018-12-01","ids":{"openalex":"https://openalex.org/W2911611059","doi":"https://doi.org/10.1109/bibm.2018.8621441","mag":"2911611059"},"language":"en","primary_location":{"id":"doi:10.1109/bibm.2018.8621441","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibm.2018.8621441","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2018 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100767118","display_name":"Hongjie Chen","orcid":"https://orcid.org/0000-0002-6438-108X"},"institutions":[{"id":"https://openalex.org/I191208505","display_name":"Xiamen University","ror":"https://ror.org/00mcjh785","country_code":"CN","type":"education","lineage":["https://openalex.org/I191208505"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Hongjie Chen","raw_affiliation_strings":["Department of Computer Science, Xiamen university, Xiamen, China"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Xiamen university, Xiamen, China","institution_ids":["https://openalex.org/I191208505"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100722972","display_name":"Xun Wang","orcid":"https://orcid.org/0000-0002-3039-4683"},"institutions":[{"id":"https://openalex.org/I204553293","display_name":"China University of Petroleum, Beijing","ror":"https://ror.org/041qf4r12","country_code":"CN","type":"education","lineage":["https://openalex.org/I204553293"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xun Wang","raw_affiliation_strings":["College of Computer and Communication Engineering, University of Petroleum, China"],"affiliations":[{"raw_affiliation_string":"College of Computer and Communication Engineering, University of Petroleum, China","institution_ids":["https://openalex.org/I204553293"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100342900","display_name":"Xuan Zhang","orcid":"https://orcid.org/0000-0002-3089-9809"},"institutions":[{"id":"https://openalex.org/I114017466","display_name":"University of Technology Sydney","ror":"https://ror.org/03f0f6041","country_code":"AU","type":"education","lineage":["https://openalex.org/I114017466"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Xuan Zhang","raw_affiliation_strings":["Advanced Analytics Institute, University of Technology Sydney, Sydney, Australia"],"affiliations":[{"raw_affiliation_string":"Advanced Analytics Institute, University of Technology Sydney, Sydney, Australia","institution_ids":["https://openalex.org/I114017466"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5027286013","display_name":"Xiangxiang Zeng","orcid":"https://orcid.org/0000-0001-6201-0114"},"institutions":[{"id":"https://openalex.org/I88060688","display_name":"Universidad Polit\u00e9cnica de Madrid","ror":"https://ror.org/03n6nwv02","country_code":"ES","type":"education","lineage":["https://openalex.org/I88060688"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Xiangxiang Zeng","raw_affiliation_strings":["Departamento de Inteligencia Artificial, Universidad Polit'ecnica de Madrid, Madrid, Campus de Montegancedo Boadilla del Monte, Spain"],"affiliations":[{"raw_affiliation_string":"Departamento de Inteligencia Artificial, Universidad Polit'ecnica de Madrid, Madrid, Campus de Montegancedo Boadilla del Monte, Spain","institution_ids":["https://openalex.org/I88060688"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5006420025","display_name":"Tao Song","orcid":"https://orcid.org/0000-0002-0130-3340"},"institutions":[{"id":"https://openalex.org/I204553293","display_name":"China University of Petroleum, Beijing","ror":"https://ror.org/041qf4r12","country_code":"CN","type":"education","lineage":["https://openalex.org/I204553293"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Tao Song","raw_affiliation_strings":["College of Computer and Communication Engineering, University of Petroleum, China"],"affiliations":[{"raw_affiliation_string":"College of Computer and Communication Engineering, University of Petroleum, China","institution_ids":["https://openalex.org/I204553293"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5049425478","display_name":"Alfonso Rodr\u00edguez\u2010Pat\u00f3n","orcid":"https://orcid.org/0000-0001-7289-2114"},"institutions":[{"id":"https://openalex.org/I88060688","display_name":"Universidad Polit\u00e9cnica de Madrid","ror":"https://ror.org/03n6nwv02","country_code":"ES","type":"education","lineage":["https://openalex.org/I88060688"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Alfonso Rodriguez-Paton","raw_affiliation_strings":["Departamento de Inteligencia Artificial, Universidad Polit'ecnica de Madrid, Madrid, Campus de Montegancedo Boadilla del Monte, Spain"],"affiliations":[{"raw_affiliation_string":"Departamento de Inteligencia Artificial, Universidad Polit'ecnica de Madrid, Madrid, Campus de Montegancedo Boadilla del Monte, Spain","institution_ids":["https://openalex.org/I88060688"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5100767118"],"corresponding_institution_ids":["https://openalex.org/I191208505"],"apc_list":null,"apc_paid":null,"fwci":0.3173,"has_fulltext":false,"cited_by_count":5,"citation_normalized_percentile":{"value":0.54446029,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":95},"biblio":{"volume":"8","issue":null,"first_page":"175","last_page":"178"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10515","display_name":"Cancer-related molecular mechanisms research","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10515","display_name":"Cancer-related molecular mechanisms research","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11482","display_name":"RNA modifications and cancer","score":0.9850000143051147,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10604","display_name":"RNA Research and Splicing","score":0.9732000231742859,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7423545718193054},{"id":"https://openalex.org/keywords/artificial-neural-network","display_name":"Artificial neural network","score":0.6743625998497009},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.6315339207649231},{"id":"https://openalex.org/keywords/association","display_name":"Association (psychology)","score":0.6306975483894348},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.5885358452796936},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.5769994258880615},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.48766934871673584},{"id":"https://openalex.org/keywords/cross-validation","display_name":"Cross-validation","score":0.48197025060653687},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.3773992657661438}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7423545718193054},{"id":"https://openalex.org/C50644808","wikidata":"https://www.wikidata.org/wiki/Q192776","display_name":"Artificial neural network","level":2,"score":0.6743625998497009},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.6315339207649231},{"id":"https://openalex.org/C142853389","wikidata":"https://www.wikidata.org/wiki/Q744778","display_name":"Association (psychology)","level":2,"score":0.6306975483894348},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.5885358452796936},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5769994258880615},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.48766934871673584},{"id":"https://openalex.org/C27181475","wikidata":"https://www.wikidata.org/wiki/Q541014","display_name":"Cross-validation","level":2,"score":0.48197025060653687},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.3773992657661438},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/bibm.2018.8621441","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibm.2018.8621441","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2018 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/3","score":0.6800000071525574,"display_name":"Good health and well-being"}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":19,"referenced_works":["https://openalex.org/W1723491975","https://openalex.org/W2039816251","https://openalex.org/W2057692691","https://openalex.org/W2059878940","https://openalex.org/W2086968193","https://openalex.org/W2106033134","https://openalex.org/W2109100311","https://openalex.org/W2122617297","https://openalex.org/W2128983843","https://openalex.org/W2136222002","https://openalex.org/W2140060911","https://openalex.org/W2152970345","https://openalex.org/W2168089202","https://openalex.org/W2345181615","https://openalex.org/W2512308096","https://openalex.org/W2573312253","https://openalex.org/W2782571367","https://openalex.org/W2801501532","https://openalex.org/W6637895972"],"related_works":["https://openalex.org/W816105089","https://openalex.org/W2352440174","https://openalex.org/W4309440960","https://openalex.org/W2062168445","https://openalex.org/W912456583","https://openalex.org/W2348940229","https://openalex.org/W2898732673","https://openalex.org/W2363046693","https://openalex.org/W2144801536","https://openalex.org/W4241378172"],"abstract_inverted_index":{"Recent":[0],"studies":[1,95],"have":[2,16,101],"demonstrated":[3],"that":[4,112],"IncRNAs":[5],"play":[6],"pivotal":[7],"roles":[8],"in":[9,45,56],"various":[10],"biological":[11],"processes.":[12],"Some":[13],"computational":[14],"methods":[15,51],"been":[17,102],"developed":[18],"to":[19],"infer":[20],"IncRNA-disease":[21,53,86],"associations.":[22],"However,":[23],"the":[24],"experimental":[25,106],"identification":[26],"is":[27,39,110],"time-consuming.":[28],"In":[29,67],"this":[30],"paper,":[31],"we":[32,63,82],"introduce":[33],"a":[34,116],"method":[35,74,91],"named":[36],"NNHLDA,":[37],"which":[38],"based":[40],"on":[41,96],"neighborhood":[42],"information":[43],"aggregation":[44],"neural":[46],"network.":[47,58],"NNHLDA":[48,73,113],"outperforms":[49],"previous":[50],"at":[52],"association":[54],"prediction":[55],"heterogeneous":[57],"To":[59],"evaluate":[60],"our":[61,72,90],"method,":[62],"conduct":[64],"several":[65],"experiments.":[66],"leave-one-out":[68],"cross-validation":[69],"(LOOCV)":[70],"experiments,":[71],"performed":[75],"better":[76],"than":[77],"current":[78],"state-of-the-art":[79],"approach.":[80],"Furthermore,":[81],"extracted":[83],"top":[84],"100":[85],"associations":[87],"identified":[88],"by":[89,104],"and":[92],"conducted":[93],"case":[94],"gastric":[97],"cancer.":[98],"The":[99],"predictions":[100],"confirmed":[103],"verified":[105],"results.":[107],"Therefore,":[108],"it":[109],"anticipated":[111],"could":[114],"be":[115],"useful":[117],"tool":[118],"for":[119],"biomedical":[120],"researches.":[121]},"counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2021,"cited_by_count":2},{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
