{"id":"https://openalex.org/W2913265378","doi":"https://doi.org/10.1109/bibm.2018.8621293","title":"Early experiences in 4D quantitative analysis of insulin granules in living beta-cells","display_name":"Early experiences in 4D quantitative analysis of insulin granules in living beta-cells","publication_year":2018,"publication_date":"2018-12-01","ids":{"openalex":"https://openalex.org/W2913265378","doi":"https://doi.org/10.1109/bibm.2018.8621293","mag":"2913265378"},"language":"en","primary_location":{"id":"doi:10.1109/bibm.2018.8621293","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibm.2018.8621293","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2018 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5042081469","display_name":"Ermanno Cordelli","orcid":"https://orcid.org/0000-0001-6062-7575"},"institutions":[{"id":"https://openalex.org/I155125353","display_name":"Universit\u00e0 Campus Bio-Medico","ror":"https://ror.org/04gqx4x78","country_code":"IT","type":"education","lineage":["https://openalex.org/I155125353"]}],"countries":["IT"],"is_corresponding":true,"raw_author_name":"Ermanno Cordelli","raw_affiliation_strings":["Unit of Computer Systems and Bioinformatics, Department of Engineering, Universit\u00e0 Campus Bio-Medico di Roma"],"affiliations":[{"raw_affiliation_string":"Unit of Computer Systems and Bioinformatics, Department of Engineering, Universit\u00e0 Campus Bio-Medico di Roma","institution_ids":["https://openalex.org/I155125353"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5062985886","display_name":"Mario Merone","orcid":"https://orcid.org/0000-0002-9406-2397"},"institutions":[{"id":"https://openalex.org/I155125353","display_name":"Universit\u00e0 Campus Bio-Medico","ror":"https://ror.org/04gqx4x78","country_code":"IT","type":"education","lineage":["https://openalex.org/I155125353"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Mario Merone","raw_affiliation_strings":["Unit of Computer Systems and Bioinformatics, Department of Engineering, Universit\u00e0 Campus Bio-Medico di Roma"],"affiliations":[{"raw_affiliation_string":"Unit of Computer Systems and Bioinformatics, Department of Engineering, Universit\u00e0 Campus Bio-Medico di Roma","institution_ids":["https://openalex.org/I155125353"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5075829816","display_name":"Flavio Di Giacinto","orcid":"https://orcid.org/0000-0002-6726-7768"},"institutions":[{"id":"https://openalex.org/I103320735","display_name":"Universit\u00e0 Cattolica del Sacro Cuore","ror":"https://ror.org/03h7r5v07","country_code":"IT","type":"education","lineage":["https://openalex.org/I103320735"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Flavio Di Giacinto","raw_affiliation_strings":["Istituto di Fisica, Universit\u00e0 Cattolica del Sacro Cuore"],"affiliations":[{"raw_affiliation_string":"Istituto di Fisica, Universit\u00e0 Cattolica del Sacro Cuore","institution_ids":["https://openalex.org/I103320735"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5108835505","display_name":"Bareket Daniel","orcid":null},"institutions":[{"id":"https://openalex.org/I197251160","display_name":"Hebrew University of Jerusalem","ror":"https://ror.org/03qxff017","country_code":"IL","type":"education","lineage":["https://openalex.org/I197251160"]}],"countries":["IL"],"is_corresponding":false,"raw_author_name":"Bareket Daniel","raw_affiliation_strings":["Institute for Drug Research, Faculty of Medicine, Hebrew University of Israel"],"affiliations":[{"raw_affiliation_string":"Institute for Drug Research, Faculty of Medicine, Hebrew University of Israel","institution_ids":["https://openalex.org/I197251160"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5068743901","display_name":"Giuseppe Maulucci","orcid":"https://orcid.org/0000-0002-2154-319X"},"institutions":[{"id":"https://openalex.org/I103320735","display_name":"Universit\u00e0 Cattolica del Sacro Cuore","ror":"https://ror.org/03h7r5v07","country_code":"IT","type":"education","lineage":["https://openalex.org/I103320735"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Giuseppe Maulucci","raw_affiliation_strings":["Universita Cattolica del Sacro Cuore, Milano, Lombardia, IT"],"affiliations":[{"raw_affiliation_string":"Universita Cattolica del Sacro Cuore, Milano, Lombardia, IT","institution_ids":["https://openalex.org/I103320735"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5088201458","display_name":"Shlomo Sasson","orcid":"https://orcid.org/0000-0002-9343-526X"},"institutions":[{"id":"https://openalex.org/I197251160","display_name":"Hebrew University of Jerusalem","ror":"https://ror.org/03qxff017","country_code":"IL","type":"education","lineage":["https://openalex.org/I197251160"]}],"countries":["IL"],"is_corresponding":false,"raw_author_name":"Shlomo Sasson","raw_affiliation_strings":["Institute for Drug Research, Faculty of Medicine, Hebrew University of Israel"],"affiliations":[{"raw_affiliation_string":"Institute for Drug Research, Faculty of Medicine, Hebrew University of Israel","institution_ids":["https://openalex.org/I197251160"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5003216983","display_name":"Paolo Soda","orcid":"https://orcid.org/0000-0003-2621-072X"},"institutions":[{"id":"https://openalex.org/I155125353","display_name":"Universit\u00e0 Campus Bio-Medico","ror":"https://ror.org/04gqx4x78","country_code":"IT","type":"education","lineage":["https://openalex.org/I155125353"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Paolo Soda","raw_affiliation_strings":["Unit of Computer Systems and Bioinformatics, Department of Engineering, Universit\u00e0 Campus Bio-Medico di Roma"],"affiliations":[{"raw_affiliation_string":"Unit of Computer Systems and Bioinformatics, Department of Engineering, Universit\u00e0 Campus Bio-Medico di Roma","institution_ids":["https://openalex.org/I155125353"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5042081469"],"corresponding_institution_ids":["https://openalex.org/I155125353"],"apc_list":null,"apc_paid":null,"fwci":0.3233,"has_fulltext":false,"cited_by_count":3,"citation_normalized_percentile":{"value":0.65163714,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":94},"biblio":{"volume":null,"issue":null,"first_page":"2009","last_page":"2016"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10560","display_name":"Diabetes Management and Research","score":0.9937000274658203,"subfield":{"id":"https://openalex.org/subfields/2712","display_name":"Endocrinology, Diabetes and Metabolism"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T10560","display_name":"Diabetes Management and Research","score":0.9937000274658203,"subfield":{"id":"https://openalex.org/subfields/2712","display_name":"Endocrinology, Diabetes and Metabolism"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.987500011920929,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10839","display_name":"Pancreatic function and diabetes","score":0.982699990272522,"subfield":{"id":"https://openalex.org/subfields/2746","display_name":"Surgery"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/granule","display_name":"Granule (geology)","score":0.7005550265312195},{"id":"https://openalex.org/keywords/insulin","display_name":"Insulin","score":0.5970399379730225},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5136350989341736},{"id":"https://openalex.org/keywords/biological-system","display_name":"Biological system","score":0.472508043050766},{"id":"https://openalex.org/keywords/dynamics","display_name":"Dynamics (music)","score":0.459608793258667},{"id":"https://openalex.org/keywords/confocal","display_name":"Confocal","score":0.4497702419757843},{"id":"https://openalex.org/keywords/tracking","display_name":"Tracking (education)","score":0.44154390692710876},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.3667582869529724},{"id":"https://openalex.org/keywords/cell-biology","display_name":"Cell biology","score":0.3516543507575989},{"id":"https://openalex.org/keywords/biophysics","display_name":"Biophysics","score":0.34765589237213135},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3412117660045624},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.33934468030929565},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.3354061245918274},{"id":"https://openalex.org/keywords/physics","display_name":"Physics","score":0.23455199599266052},{"id":"https://openalex.org/keywords/endocrinology","display_name":"Endocrinology","score":0.1090971827507019}],"concepts":[{"id":"https://openalex.org/C49760210","wikidata":"https://www.wikidata.org/wiki/Q5596727","display_name":"Granule (geology)","level":2,"score":0.7005550265312195},{"id":"https://openalex.org/C2779306644","wikidata":"https://www.wikidata.org/wiki/Q2002370","display_name":"Insulin","level":2,"score":0.5970399379730225},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5136350989341736},{"id":"https://openalex.org/C186060115","wikidata":"https://www.wikidata.org/wiki/Q30336093","display_name":"Biological system","level":1,"score":0.472508043050766},{"id":"https://openalex.org/C145912823","wikidata":"https://www.wikidata.org/wiki/Q113558","display_name":"Dynamics (music)","level":2,"score":0.459608793258667},{"id":"https://openalex.org/C136009344","wikidata":"https://www.wikidata.org/wiki/Q336201","display_name":"Confocal","level":2,"score":0.4497702419757843},{"id":"https://openalex.org/C2775936607","wikidata":"https://www.wikidata.org/wiki/Q466845","display_name":"Tracking (education)","level":2,"score":0.44154390692710876},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3667582869529724},{"id":"https://openalex.org/C95444343","wikidata":"https://www.wikidata.org/wiki/Q7141","display_name":"Cell biology","level":1,"score":0.3516543507575989},{"id":"https://openalex.org/C12554922","wikidata":"https://www.wikidata.org/wiki/Q7100","display_name":"Biophysics","level":1,"score":0.34765589237213135},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3412117660045624},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.33934468030929565},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.3354061245918274},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.23455199599266052},{"id":"https://openalex.org/C134018914","wikidata":"https://www.wikidata.org/wiki/Q162606","display_name":"Endocrinology","level":1,"score":0.1090971827507019},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.0},{"id":"https://openalex.org/C120665830","wikidata":"https://www.wikidata.org/wiki/Q14620","display_name":"Optics","level":1,"score":0.0},{"id":"https://openalex.org/C19417346","wikidata":"https://www.wikidata.org/wiki/Q7922","display_name":"Pedagogy","level":1,"score":0.0},{"id":"https://openalex.org/C24890656","wikidata":"https://www.wikidata.org/wiki/Q82811","display_name":"Acoustics","level":1,"score":0.0},{"id":"https://openalex.org/C15744967","wikidata":"https://www.wikidata.org/wiki/Q9418","display_name":"Psychology","level":0,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/bibm.2018.8621293","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibm.2018.8621293","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2018 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[{"score":0.5799999833106995,"display_name":"Good health and well-being","id":"https://metadata.un.org/sdg/3"}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":24,"referenced_works":["https://openalex.org/W44929223","https://openalex.org/W1594588487","https://openalex.org/W1777740471","https://openalex.org/W1782749253","https://openalex.org/W1832852958","https://openalex.org/W1991203802","https://openalex.org/W2004448265","https://openalex.org/W2032074620","https://openalex.org/W2035310767","https://openalex.org/W2074850592","https://openalex.org/W2089560759","https://openalex.org/W2104083983","https://openalex.org/W2105916176","https://openalex.org/W2122332820","https://openalex.org/W2129168442","https://openalex.org/W2134971690","https://openalex.org/W2305846129","https://openalex.org/W2417615065","https://openalex.org/W2430603725","https://openalex.org/W2517211077","https://openalex.org/W2529052661","https://openalex.org/W2576143177","https://openalex.org/W2753133554","https://openalex.org/W2796820808"],"related_works":["https://openalex.org/W3087798489","https://openalex.org/W2058646078","https://openalex.org/W3133591510","https://openalex.org/W1608747660","https://openalex.org/W2362083093","https://openalex.org/W2351422561","https://openalex.org/W2092990776","https://openalex.org/W2902575801","https://openalex.org/W2393640771","https://openalex.org/W2156071077"],"abstract_inverted_index":{"Pancreatic":[0],"beta":[1,152,251],"cells":[2,161,252],"biosynthesize":[3],"and":[4,35,45,57,67,86,103,112,114,178,222,233,248],"package":[5],"insulin":[6,8,26,43,92,146],"in":[7,31,135,148,250,258],"granules,":[9,39],"whose":[10],"secretion":[11,36,44],"is":[12,110,215,227],"regulated":[13],"to":[14,41,47,81,123,202],"maintain":[15],"blood":[16],"glucose":[17],"homeostasis.":[18],"The":[19,61],"detailed":[20],"knowledge":[21],"of":[22,25,37,50,63,91,127,141,145,182,206],"the":[23,32,48,58,89,97,118,125,142,160,176],"dynamics":[24,90],"granules":[27,147,207],"could":[28,254],"reveal":[29],"defects":[30],"intracellular":[33],"handling":[34],"these":[38],"leading":[40],"impaired":[42,257],"consequently":[46],"development":[49],"several":[51],"metabolic":[52,59],"diseases,":[53],"including":[54],"type-2":[55],"diabetes":[56],"syndrome.":[60],"use":[62],"spinning":[64],"disk":[65],"confocal":[66],"light":[68],"sheet":[69],"microscopy":[70],"with":[71,245],"fast":[72],"sequential":[73],"scanning":[74],"that":[75,226,253],"enable":[76],"rapid":[77],"volumetric":[78],"imaging,":[79],"allows":[80,201],"monitor":[82],"at":[83],"high":[84],"spatial":[85],"temporal":[87],"resolution":[88],"granules.":[93],"However,":[94],"obtaining":[95],"all":[96],"information":[98,116],"for":[99],"accurate":[100],"3D":[101],"imaging":[102],"particle":[104,119],"tracking":[105,120],"within":[106],"a":[107,138,163,169,180,212,218,223,230],"single":[108],"cell":[109],"complex":[111],"challenging,":[113],"extracting":[115],"from":[117],"data":[121,198],"requires":[122],"analyse":[124],"segments":[126],"motion":[128,144],"trajectories.":[129],"To":[130],"this":[131,136],"aim,":[132],"we":[133,155,174,190],"present":[134],"study":[137],"quantitative":[139,183],"analysis":[140],"4D":[143],"glucose-stimulated":[149],"INS-":[150],"1E":[151],"cells.":[153],"First,":[154],"tracked":[156],"each":[157],"granule":[158,187],"inside":[159],"via":[162],"computer-based":[164],"automatic":[165],"approach":[166],"relying":[167],"on":[168],"two-step":[170],"iterative":[171],"process.":[172],"Next,":[173],"removed":[175],"artifacts":[177],"introduced":[179],"set":[181],"cinematic":[184],"features":[185],"describing":[186],"dynamics.":[188],"Finally,":[189],"implemented":[191],"an":[192],"unsupervised":[193],"machine":[194],"learning":[195],"based":[196],"exploratory":[197],"analysis,":[199],"which":[200],"distinguish":[203],"two":[204],"sets":[205],"marked":[208],"by":[209,217,229],"distinct":[210,240],"dynamics:":[211],"first":[213],"pool":[214,225],"characterized":[216,228],"diffusive":[219],"dynamic":[220],"behavior,":[221],"second":[224],"more":[231],"directed":[232],"targeted":[234],"movement.":[235],"These":[236],"pools":[237],"may":[238],"have":[239],"functional":[241],"roles":[242],"and/or":[243],"interactions":[244],"other":[246],"structures":[247],"organelles":[249],"be":[255],"selectively":[256],"pathological":[259],"settings.":[260]},"counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2021,"cited_by_count":1},{"year":2019,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
