{"id":"https://openalex.org/W2773318219","doi":"https://doi.org/10.1109/bibm.2017.8217939","title":"A simulation model of glucose-insulin metabolism and implementation on OSG","display_name":"A simulation model of glucose-insulin metabolism and implementation on OSG","publication_year":2017,"publication_date":"2017-11-01","ids":{"openalex":"https://openalex.org/W2773318219","doi":"https://doi.org/10.1109/bibm.2017.8217939","mag":"2773318219"},"language":"en","primary_location":{"id":"doi:10.1109/bibm.2017.8217939","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibm.2017.8217939","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2017 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5080068440","display_name":"Milad Ghiasi Rad","orcid":"https://orcid.org/0000-0002-9642-4101"},"institutions":[{"id":"https://openalex.org/I114395901","display_name":"University of Nebraska\u2013Lincoln","ror":"https://ror.org/043mer456","country_code":"US","type":"education","lineage":["https://openalex.org/I114395901"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Milad Ghiasi Rad","raw_affiliation_strings":["Department of Computer Science & Engineering, University of Nebraska - Lincoln, Lincoln, NE, United States"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science & Engineering, University of Nebraska - Lincoln, Lincoln, NE, United States","institution_ids":["https://openalex.org/I114395901"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5022519403","display_name":"Aditya Immaneni","orcid":null},"institutions":[{"id":"https://openalex.org/I114395901","display_name":"University of Nebraska\u2013Lincoln","ror":"https://ror.org/043mer456","country_code":"US","type":"education","lineage":["https://openalex.org/I114395901"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Aditya Immaneni","raw_affiliation_strings":["Department of Computer Science & Engineering, University of Nebraska - Lincoln, Lincoln, NE, United States"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science & Engineering, University of Nebraska - Lincoln, Lincoln, NE, United States","institution_ids":["https://openalex.org/I114395901"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5088051577","display_name":"Megan McCabe","orcid":"https://orcid.org/0000-0002-4080-7584"},"institutions":[{"id":"https://openalex.org/I114395901","display_name":"University of Nebraska\u2013Lincoln","ror":"https://ror.org/043mer456","country_code":"US","type":"education","lineage":["https://openalex.org/I114395901"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Megan McCabe","raw_affiliation_strings":["Department of Computer Science & Engineering, University of Nebraska - Lincoln, Lincoln, NE, United States"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science & Engineering, University of Nebraska - Lincoln, Lincoln, NE, United States","institution_ids":["https://openalex.org/I114395901"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5039872937","display_name":"Massimiliano Pierobon","orcid":"https://orcid.org/0000-0003-1074-6925"},"institutions":[{"id":"https://openalex.org/I114395901","display_name":"University of Nebraska\u2013Lincoln","ror":"https://ror.org/043mer456","country_code":"US","type":"education","lineage":["https://openalex.org/I114395901"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Massimiliano Pierobon","raw_affiliation_strings":["Department of Computer Science & Engineering, University of Nebraska - Lincoln, Lincoln, NE, United States"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science & Engineering, University of Nebraska - Lincoln, Lincoln, NE, United States","institution_ids":["https://openalex.org/I114395901"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5029528457","display_name":"Juan Cui","orcid":"https://orcid.org/0000-0001-6581-6850"},"institutions":[{"id":"https://openalex.org/I114395901","display_name":"University of Nebraska\u2013Lincoln","ror":"https://ror.org/043mer456","country_code":"US","type":"education","lineage":["https://openalex.org/I114395901"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Juan Cui","raw_affiliation_strings":["Department of Computer Science & Engineering, University of Nebraska - Lincoln, Lincoln, NE, United States"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science & Engineering, University of Nebraska - Lincoln, Lincoln, NE, United States","institution_ids":["https://openalex.org/I114395901"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5080068440"],"corresponding_institution_ids":["https://openalex.org/I114395901"],"apc_list":null,"apc_paid":null,"fwci":0.1063,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":{"value":0.49934011,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":94},"biblio":{"volume":"2","issue":null,"first_page":"1832","last_page":"1839"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9878000020980835,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9878000020980835,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":0.9847000241279602,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10715","display_name":"Distributed and Parallel Computing Systems","score":0.9742000102996826,"subfield":{"id":"https://openalex.org/subfields/1705","display_name":"Computer Networks and Communications"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6546207070350647},{"id":"https://openalex.org/keywords/insulin","display_name":"Insulin","score":0.5564040541648865},{"id":"https://openalex.org/keywords/sbml","display_name":"SBML","score":0.5045047998428345},{"id":"https://openalex.org/keywords/carbohydrate-metabolism","display_name":"Carbohydrate metabolism","score":0.4884149432182312},{"id":"https://openalex.org/keywords/software-deployment","display_name":"Software deployment","score":0.45806366205215454},{"id":"https://openalex.org/keywords/simulation","display_name":"Simulation","score":0.3326317071914673},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.18801862001419067},{"id":"https://openalex.org/keywords/biotechnology","display_name":"Biotechnology","score":0.17021310329437256},{"id":"https://openalex.org/keywords/endocrinology","display_name":"Endocrinology","score":0.1422165334224701},{"id":"https://openalex.org/keywords/software-engineering","display_name":"Software engineering","score":0.1379961371421814}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6546207070350647},{"id":"https://openalex.org/C2779306644","wikidata":"https://www.wikidata.org/wiki/Q2002370","display_name":"Insulin","level":2,"score":0.5564040541648865},{"id":"https://openalex.org/C87186988","wikidata":"https://www.wikidata.org/wiki/Q452197","display_name":"SBML","level":4,"score":0.5045047998428345},{"id":"https://openalex.org/C17093226","wikidata":"https://www.wikidata.org/wiki/Q2734081","display_name":"Carbohydrate metabolism","level":2,"score":0.4884149432182312},{"id":"https://openalex.org/C105339364","wikidata":"https://www.wikidata.org/wiki/Q2297740","display_name":"Software deployment","level":2,"score":0.45806366205215454},{"id":"https://openalex.org/C44154836","wikidata":"https://www.wikidata.org/wiki/Q45045","display_name":"Simulation","level":1,"score":0.3326317071914673},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.18801862001419067},{"id":"https://openalex.org/C150903083","wikidata":"https://www.wikidata.org/wiki/Q7108","display_name":"Biotechnology","level":1,"score":0.17021310329437256},{"id":"https://openalex.org/C134018914","wikidata":"https://www.wikidata.org/wiki/Q162606","display_name":"Endocrinology","level":1,"score":0.1422165334224701},{"id":"https://openalex.org/C115903868","wikidata":"https://www.wikidata.org/wiki/Q80993","display_name":"Software engineering","level":1,"score":0.1379961371421814},{"id":"https://openalex.org/C45874996","wikidata":"https://www.wikidata.org/wiki/Q37045","display_name":"Markup language","level":3,"score":0.0},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0},{"id":"https://openalex.org/C8797682","wikidata":"https://www.wikidata.org/wiki/Q2115","display_name":"XML","level":2,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/bibm.2017.8217939","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibm.2017.8217939","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2017 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[{"display_name":"Zero hunger","id":"https://metadata.un.org/sdg/2","score":0.5699999928474426}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":22,"referenced_works":["https://openalex.org/W35463602","https://openalex.org/W768639568","https://openalex.org/W1963964765","https://openalex.org/W1985505691","https://openalex.org/W1986662234","https://openalex.org/W2004235182","https://openalex.org/W2035977505","https://openalex.org/W2037614307","https://openalex.org/W2092350304","https://openalex.org/W2102653059","https://openalex.org/W2128601422","https://openalex.org/W2150908245","https://openalex.org/W2150937124","https://openalex.org/W2159482845","https://openalex.org/W2159739447","https://openalex.org/W2165681080","https://openalex.org/W2751862591","https://openalex.org/W2790825170","https://openalex.org/W4230392683","https://openalex.org/W4233060585","https://openalex.org/W6622457838","https://openalex.org/W7038906009"],"related_works":["https://openalex.org/W1833372769","https://openalex.org/W1994518768","https://openalex.org/W104010570","https://openalex.org/W2082621456","https://openalex.org/W2150908245","https://openalex.org/W2069162648","https://openalex.org/W3080133182","https://openalex.org/W2126025430","https://openalex.org/W2565701637","https://openalex.org/W1987628135"],"abstract_inverted_index":{"In":[0],"this":[1,150],"paper,":[2],"we":[3],"present":[4],"the":[5,20,34,75,83,119,123,132,135,139],"design":[6],"and":[7,16,53,73,80,89,105,131,145],"implementation":[8,116],"of":[9,29,36,77,101,110,125,134,158],"a":[10,37,156],"stand-alone":[11],"tool":[12,92,137,151],"for":[13,82,108,128,138,155],"metabolic":[14,141],"simulation":[15,109],"its":[17],"deployment":[18],"on":[19,117],"Open":[21],"Science":[22],"Grid":[23],"(OSG).":[24],"The":[25,91,143],"case":[26],"study":[27],"model":[28,129],"glucose-insulin":[30,146],"metabolism":[31],"aims":[32],"at":[33],"development":[35],"real-time":[38],"monitoring":[39],"system":[40,59],"that":[41],"can":[42,152],"assist":[43],"patients":[44],"with":[45,68],"diabetes":[46],"to":[47,62,97],"handle":[48],"their":[49],"blood":[50],"glucose":[51],"profile":[52],"maintain":[54],"healthy":[55],"diet":[56],"habit.":[57],"This":[58],"is":[60],"able":[61],"integrate":[63],"custom-built":[64],"SBML":[65],"models":[66],"along":[67],"users'":[69],"food":[70],"intake":[71],"information":[72,104],"produces":[74],"estimation":[76],"ATP,":[78],"Glucose,":[79],"Insulin":[81],"given":[84,112,140],"duration":[85],"using":[86],"numerical":[87,126],"analysis":[88],"simulation.":[90,142],"has":[93],"also":[94],"been":[95],"generalized":[96],"take":[98],"into":[99],"consideration":[100],"temporal":[102],"genomic":[103],"be":[106,153],"flexible":[107],"any":[111],"biochemical":[113],"models.":[114],"After":[115],"OSG,":[118],"results":[120],"have":[121],"demonstrated":[122],"effectiveness":[124],"optimization":[127],"selection":[130],"feasibility":[133],"proposed":[136],"ATP-glucose":[144],"correlations":[147],"revealed":[148],"by":[149],"promising":[154],"variety":[157],"different":[159],"application":[160],"cases.":[161]},"counts_by_year":[{"year":2018,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
