{"id":"https://openalex.org/W2773823763","doi":"https://doi.org/10.1109/bibm.2017.8217842","title":"Towards practical temporal relation extraction from clinical notes: An analysis of direct temporal relations","display_name":"Towards practical temporal relation extraction from clinical notes: An analysis of direct temporal relations","publication_year":2017,"publication_date":"2017-11-01","ids":{"openalex":"https://openalex.org/W2773823763","doi":"https://doi.org/10.1109/bibm.2017.8217842","mag":"2773823763"},"language":"en","primary_location":{"id":"doi:10.1109/bibm.2017.8217842","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibm.2017.8217842","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2017 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100666474","display_name":"Heejin Lee","orcid":"https://orcid.org/0000-0003-3403-683X"},"institutions":[{"id":"https://openalex.org/I919571938","display_name":"The University of Texas Health Science Center at Houston","ror":"https://ror.org/03gds6c39","country_code":"US","type":"education","lineage":["https://openalex.org/I919571938"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Hee-Jin Lee","raw_affiliation_strings":["School of Biomedical Informatics, The University of Texas Health Science Center at Houston, Huston, TX"],"affiliations":[{"raw_affiliation_string":"School of Biomedical Informatics, The University of Texas Health Science Center at Houston, Huston, TX","institution_ids":["https://openalex.org/I919571938"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5091899643","display_name":"Yaoyun Zhang","orcid":"https://orcid.org/0000-0001-9220-3101"},"institutions":[{"id":"https://openalex.org/I919571938","display_name":"The University of Texas Health Science Center at Houston","ror":"https://ror.org/03gds6c39","country_code":"US","type":"education","lineage":["https://openalex.org/I919571938"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Yaoyun Zhang","raw_affiliation_strings":["School of Biomedical Informatics, The University of Texas Health Science Center at Houston, Huston, TX"],"affiliations":[{"raw_affiliation_string":"School of Biomedical Informatics, The University of Texas Health Science Center at Houston, Huston, TX","institution_ids":["https://openalex.org/I919571938"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5020766468","display_name":"Jun Xu","orcid":"https://orcid.org/0000-0001-7170-111X"},"institutions":[{"id":"https://openalex.org/I919571938","display_name":"The University of Texas Health Science Center at Houston","ror":"https://ror.org/03gds6c39","country_code":"US","type":"education","lineage":["https://openalex.org/I919571938"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jun Xu","raw_affiliation_strings":["School of Biomedical Informatics, The University of Texas Health Science Center at Houston, Huston, TX"],"affiliations":[{"raw_affiliation_string":"School of Biomedical Informatics, The University of Texas Health Science Center at Houston, Huston, TX","institution_ids":["https://openalex.org/I919571938"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5076058129","display_name":"Cui Tao","orcid":"https://orcid.org/0000-0002-4267-1924"},"institutions":[{"id":"https://openalex.org/I919571938","display_name":"The University of Texas Health Science Center at Houston","ror":"https://ror.org/03gds6c39","country_code":"US","type":"education","lineage":["https://openalex.org/I919571938"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Cui Tao","raw_affiliation_strings":["School of Biomedical Informatics, The University of Texas Health Science Center at Houston, Huston, TX"],"affiliations":[{"raw_affiliation_string":"School of Biomedical Informatics, The University of Texas Health Science Center at Houston, Huston, TX","institution_ids":["https://openalex.org/I919571938"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5084072550","display_name":"Hua Xu","orcid":"https://orcid.org/0000-0002-5274-4672"},"institutions":[{"id":"https://openalex.org/I919571938","display_name":"The University of Texas Health Science Center at Houston","ror":"https://ror.org/03gds6c39","country_code":"US","type":"education","lineage":["https://openalex.org/I919571938"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Hua Xu","raw_affiliation_strings":["School of Biomedical Informatics, The University of Texas Health Science Center at Houston, Huston, TX"],"affiliations":[{"raw_affiliation_string":"School of Biomedical Informatics, The University of Texas Health Science Center at Houston, Huston, TX","institution_ids":["https://openalex.org/I919571938"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5055848133","display_name":"Min Jiang","orcid":"https://orcid.org/0000-0002-1407-0961"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Min Jiang","raw_affiliation_strings":["Pieces Technologies, Dallas, TX"],"affiliations":[{"raw_affiliation_string":"Pieces Technologies, Dallas, TX","institution_ids":[]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5100666474"],"corresponding_institution_ids":["https://openalex.org/I919571938"],"apc_list":null,"apc_paid":null,"fwci":0.319,"has_fulltext":false,"cited_by_count":6,"citation_normalized_percentile":{"value":0.59247049,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":95},"biblio":{"volume":"23","issue":null,"first_page":"1272","last_page":"1275"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10215","display_name":"Semantic Web and Ontologies","score":0.9932000041007996,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.9902999997138977,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/relation","display_name":"Relation (database)","score":0.6652926802635193},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6646965742111206},{"id":"https://openalex.org/keywords/relationship-extraction","display_name":"Relationship extraction","score":0.6478438973426819},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.26494669914245605}],"concepts":[{"id":"https://openalex.org/C25343380","wikidata":"https://www.wikidata.org/wiki/Q277521","display_name":"Relation (database)","level":2,"score":0.6652926802635193},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6646965742111206},{"id":"https://openalex.org/C153604712","wikidata":"https://www.wikidata.org/wiki/Q7310755","display_name":"Relationship extraction","level":3,"score":0.6478438973426819},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.26494669914245605}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/bibm.2017.8217842","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibm.2017.8217842","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2017 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[{"score":0.5099999904632568,"display_name":"Peace, Justice and strong institutions","id":"https://metadata.un.org/sdg/16"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320337354","display_name":"National Institute of General Medical Sciences","ror":"https://ror.org/04q48ey07"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":25,"referenced_works":["https://openalex.org/W182966350","https://openalex.org/W1573258796","https://openalex.org/W1944671275","https://openalex.org/W1956885672","https://openalex.org/W2005430761","https://openalex.org/W2036935277","https://openalex.org/W2053154970","https://openalex.org/W2114735889","https://openalex.org/W2137407193","https://openalex.org/W2162364899","https://openalex.org/W2166111585","https://openalex.org/W2250526219","https://openalex.org/W2251220668","https://openalex.org/W2251758222","https://openalex.org/W2293444135","https://openalex.org/W2468018615","https://openalex.org/W2468432491","https://openalex.org/W2516562520","https://openalex.org/W2917019145","https://openalex.org/W6607527683","https://openalex.org/W6634428159","https://openalex.org/W6640866847","https://openalex.org/W6691217215","https://openalex.org/W6691573161","https://openalex.org/W6697334492"],"related_works":["https://openalex.org/W2963043498","https://openalex.org/W2609844752","https://openalex.org/W2981341912","https://openalex.org/W2152917747","https://openalex.org/W4200635478","https://openalex.org/W4221160509","https://openalex.org/W4226439756","https://openalex.org/W4226278302","https://openalex.org/W3144259685","https://openalex.org/W2528512298"],"abstract_inverted_index":{"Following":[0],"the":[1,9,38,75,82,101,178,185,201,204,229],"conventions":[2],"developed":[3,213],"in":[4,37,62,125],"general":[5],"domain,":[6],"most":[7],"of":[8,23,58,84,122,168,193,203,233],"current":[10,85],"work":[11],"on":[12,74,119,145,220],"clinical":[13,76,141],"temporal":[14,24,59,66,123,136,147,152,187,194,207,222,238],"relation":[15,208],"identification":[16],"aims":[17],"to":[18,99,103,127,132,236],"identify":[19,88],"a":[20,55,63,120,155,190],"comprehensive":[21],"set":[22],"relations":[25,33,42,67,93,153,188,223],"from":[26],"source":[27],"documents.":[28],"This":[29,227],"includes":[30],"both":[31,89,215],"explicit":[32,90,218],"that":[34,43,87,184,200],"is":[35,109,172,212,224],"described":[36],"documents":[39],"and":[40,91,97,158,217],"implicit":[41,92,216],"are":[44,94,150],"identifiable":[45],"only":[46],"through":[47],"inference.":[48],"Although":[49],"such":[50],"an":[51,159,175],"approach":[52],"may":[53,68],"provide":[54,128],"complete":[56],"view":[57],"information":[60,137],"provided":[61],"document,":[64],"some":[65],"not":[69,110],"be":[70,104],"practically":[71,134],"essential,":[72],"depending":[73],"application":[77],"at":[78],"hand.":[79],"In":[80,113,196],"addition,":[81,197],"performances":[83,102],"systems":[86],"still":[95,225],"low":[96],"how":[98,131],"enhance":[100],"enough":[105],"for":[106,140,214,231],"practical":[107],"use":[108],"clear":[111],"yet.":[112],"this":[114],"paper,":[115],"we":[116,198],"propose":[117],"focus":[118,144],"subset":[121],"relations,":[124,148,219],"order":[126],"insights":[129],"into":[130],"develop":[133],"useful":[135],"extraction":[138,209],"methods":[139,234],"text.":[142],"We":[143,182],"\u201cdirect\u201d":[146],"which":[149,211],"intra-sentential":[151],"between":[154],"time":[156],"expression":[157],"event":[160],"mention":[161],"with":[162],"limited":[163],"syntactic":[164],"distance.":[165],"A":[166],"corpus":[167],"120":[169],"discharge":[170],"summaries":[171],"constructed,":[173],"leveraging":[174],"existing":[176],"corpus,":[177],"2012":[179],"i2b2":[180],"corpus.":[181],"show":[183,199],"direct":[186,221,237],"constitute":[189],"major":[191],"category":[192],"relations.":[195,239],"performance":[202],"state-of-the":[205],"art":[206],"system,":[210],"low.":[226],"indicates":[228],"need":[230],"development":[232],"tailored":[235]},"counts_by_year":[{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":2},{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
