{"id":"https://openalex.org/W2771238672","doi":"https://doi.org/10.1109/bibm.2017.8217720","title":"Visualization of disease relationships by multiple maps t-SNE regularization based on Nesterov accelerated gradient","display_name":"Visualization of disease relationships by multiple maps t-SNE regularization based on Nesterov accelerated gradient","publication_year":2017,"publication_date":"2017-11-01","ids":{"openalex":"https://openalex.org/W2771238672","doi":"https://doi.org/10.1109/bibm.2017.8217720","mag":"2771238672"},"language":"en","primary_location":{"id":"doi:10.1109/bibm.2017.8217720","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibm.2017.8217720","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2017 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)","raw_type":"proceedings-article"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5101496385","display_name":"Xianjun Shen","orcid":"https://orcid.org/0000-0001-5714-8848"},"institutions":[{"id":"https://openalex.org/I40963666","display_name":"Central China Normal University","ror":"https://ror.org/03x1jna21","country_code":"CN","type":"education","lineage":["https://openalex.org/I40963666"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xianjun Shen","raw_affiliation_strings":["Central China Normal University, Wuhan, Hubei, CN"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Central China Normal University, Wuhan, Hubei, CN","institution_ids":["https://openalex.org/I40963666"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5061478689","display_name":"Xianchao Zhu","orcid":"https://orcid.org/0000-0002-7148-7923"},"institutions":[{"id":"https://openalex.org/I40963666","display_name":"Central China Normal University","ror":"https://ror.org/03x1jna21","country_code":"CN","type":"education","lineage":["https://openalex.org/I40963666"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xianchao Zhu","raw_affiliation_strings":["Central China Normal University, Wuhan, Hubei, CN"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Central China Normal University, Wuhan, Hubei, CN","institution_ids":["https://openalex.org/I40963666"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5003550654","display_name":"Xingpeng Jiang","orcid":"https://orcid.org/0000-0002-8848-9300"},"institutions":[{"id":"https://openalex.org/I40963666","display_name":"Central China Normal University","ror":"https://ror.org/03x1jna21","country_code":"CN","type":"education","lineage":["https://openalex.org/I40963666"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xingpeng Jiang","raw_affiliation_strings":["Central China Normal University, Wuhan, Hubei, CN"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Central China Normal University, Wuhan, Hubei, CN","institution_ids":["https://openalex.org/I40963666"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102010131","display_name":"Tingting He","orcid":"https://orcid.org/0000-0001-7523-6550"},"institutions":[{"id":"https://openalex.org/I40963666","display_name":"Central China Normal University","ror":"https://ror.org/03x1jna21","country_code":"CN","type":"education","lineage":["https://openalex.org/I40963666"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Tingting He","raw_affiliation_strings":["Central China Normal University, Wuhan, Hubei, CN"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Central China Normal University, Wuhan, Hubei, CN","institution_ids":["https://openalex.org/I40963666"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5101569679","display_name":"Xiaohua Hu","orcid":"https://orcid.org/0000-0002-4777-3022"},"institutions":[{"id":"https://openalex.org/I40963666","display_name":"Central China Normal University","ror":"https://ror.org/03x1jna21","country_code":"CN","type":"education","lineage":["https://openalex.org/I40963666"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xiaohua Hu","raw_affiliation_strings":["Central China Normal University, Wuhan, Hubei, CN"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Central China Normal University, Wuhan, Hubei, CN","institution_ids":["https://openalex.org/I40963666"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I40963666"],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":11,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"604","last_page":"607"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9606000185012817,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9606000185012817,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9416999816894531,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9319999814033508,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/visualization","display_name":"Visualization","score":0.7708982825279236},{"id":"https://openalex.org/keywords/regularization","display_name":"Regularization (linguistics)","score":0.7025175094604492},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6557757258415222},{"id":"https://openalex.org/keywords/data-visualization","display_name":"Data visualization","score":0.5362028479576111},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.47843411564826965},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.35547682642936707}],"concepts":[{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.7708982825279236},{"id":"https://openalex.org/C2776135515","wikidata":"https://www.wikidata.org/wiki/Q17143721","display_name":"Regularization (linguistics)","level":2,"score":0.7025175094604492},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6557757258415222},{"id":"https://openalex.org/C172367668","wikidata":"https://www.wikidata.org/wiki/Q6504956","display_name":"Data visualization","level":3,"score":0.5362028479576111},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.47843411564826965},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.35547682642936707}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/bibm.2017.8217720","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibm.2017.8217720","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2017 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[{"score":0.75,"id":"https://metadata.un.org/sdg/11","display_name":"Sustainable cities and communities"}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":8,"referenced_works":["https://openalex.org/W1557571920","https://openalex.org/W1989477285","https://openalex.org/W2104261859","https://openalex.org/W2119412782","https://openalex.org/W2149489931","https://openalex.org/W2151249778","https://openalex.org/W2168301815","https://openalex.org/W2187089797"],"related_works":["https://openalex.org/W2033914206","https://openalex.org/W2042327336","https://openalex.org/W2013728941","https://openalex.org/W4225274103","https://openalex.org/W2154046714","https://openalex.org/W2189613078","https://openalex.org/W2579659702","https://openalex.org/W2923661510","https://openalex.org/W1574055964","https://openalex.org/W1965329638"],"abstract_inverted_index":{"From":[0],"a":[1,33,88,133],"biological":[2,183],"standpoint,":[3],"due":[4],"to":[5,19,41,69,106,115,138],"the":[6,43,51,81,101,108,127,147,151,163,169],"special":[7],"combination":[8],"of":[9,14,29,53,59,72,154],"complex":[10,15],"symptoms,":[11],"some":[12],"type":[13],"diseases":[16,49],"is":[17,77,87],"difficult":[18],"be":[20,67,174],"accurately":[21],"diagnosed.":[22],"Known":[23],"as":[24,160],"phenotypic":[25,44],"overlap,":[26],"these":[27],"sets":[28],"disease-related":[30],"symptoms":[31],"reveal":[32],"common":[34],"pathological":[35],"and":[36,135,156,182],"physiological":[37],"mechanism.":[38],"Researchers":[39],"attempt":[40],"visualize":[42],"relationships":[45],"between":[46],"different":[47],"human":[48],"from":[50],"perspective":[52],"machine":[54],"learning,":[55],"but":[56],"traditional":[57],"methods":[58],"visualizing":[60,92],"high-dimensional":[61],"data":[62,93],"objects":[63],"into":[64],"low-dimensional":[65,97],"would":[66],"subject":[68],"fundamental":[70],"limitations":[71],"metric":[73],"spaces.":[74,98],"Our":[75],"method":[76,90,105,113,149],"primarily":[78],"based":[79],"on":[80,142],"multiple":[82,96],"maps":[83],"t-SNE":[84],"regularization,":[85,159],"which":[86],"probabilistic":[89],"for":[91],"points":[94],"in":[95,126,177],"We":[99],"use":[100],"Nesterov":[102],"accelerated":[103],"gradient":[104],"learn":[107],"objective":[109,124],"loss":[110],"function.":[111],"This":[112,167],"thought":[114],"counterweigh":[116],"too":[117],"high":[118],"velocities":[119],"by":[120,162],"\u201cpeeking":[121],"ahead\u201d":[122],"actual":[123],"values":[125],"candidate":[128],"search":[129],"direction,":[130],"thus":[131],"providing":[132],"larger":[134],"timelier":[136],"correction":[137],"velocity.":[139],"Experiments":[140],"results":[141],"several":[143],"dataset":[144],"show":[145],"that":[146],"proposed":[148],"outperforms":[150],"original":[152],"version":[153],"mm-tSNE":[155,157,171],"with":[158],"measured":[161],"neighborhood":[164],"preservation":[165],"ratio.":[166],"suggests":[168],"modified":[170],"regularization":[172],"can":[173],"applied":[175],"directly":[176],"other":[178],"domain":[179],"including":[180],"social":[181],"datasets.":[184]},"counts_by_year":[{"year":2022,"cited_by_count":3},{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":4},{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":1},{"year":2017,"cited_by_count":1}],"updated_date":"2026-07-14T23:27:15.235271","created_date":"2025-10-10T00:00:00"}
