{"id":"https://openalex.org/W2774354246","doi":"https://doi.org/10.1109/bibm.2017.8217695","title":"Distributed gene clinical decision support system based on cloud computing","display_name":"Distributed gene clinical decision support system based on cloud computing","publication_year":2017,"publication_date":"2017-11-01","ids":{"openalex":"https://openalex.org/W2774354246","doi":"https://doi.org/10.1109/bibm.2017.8217695","mag":"2774354246"},"language":"en","primary_location":{"id":"doi:10.1109/bibm.2017.8217695","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibm.2017.8217695","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2017 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://researchrepository.wvu.edu/faculty_publications/1274","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5102990706","display_name":"Bo Xu","orcid":"https://orcid.org/0000-0001-7683-2514"},"institutions":[{"id":"https://openalex.org/I126520041","display_name":"University of Science and Technology of China","ror":"https://ror.org/04c4dkn09","country_code":"CN","type":"education","lineage":["https://openalex.org/I126520041","https://openalex.org/I19820366"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Bo Xu","raw_affiliation_strings":["School of Computer Science and Technology, University of Science and Technology of China, Hefei, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computer Science and Technology, University of Science and Technology of China, Hefei, China","institution_ids":["https://openalex.org/I126520041"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100616448","display_name":"Changlong Li","orcid":"https://orcid.org/0000-0002-4042-6538"},"institutions":[{"id":"https://openalex.org/I126520041","display_name":"University of Science and Technology of China","ror":"https://ror.org/04c4dkn09","country_code":"CN","type":"education","lineage":["https://openalex.org/I126520041","https://openalex.org/I19820366"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Changlong Li","raw_affiliation_strings":["School of Computer Science and Technology, University of Science and Technology of China, Hefei, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computer Science and Technology, University of Science and Technology of China, Hefei, China","institution_ids":["https://openalex.org/I126520041"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5060750009","display_name":"Hang Zhuang","orcid":"https://orcid.org/0000-0002-1942-1169"},"institutions":[{"id":"https://openalex.org/I126520041","display_name":"University of Science and Technology of China","ror":"https://ror.org/04c4dkn09","country_code":"CN","type":"education","lineage":["https://openalex.org/I126520041","https://openalex.org/I19820366"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Hang Zhuang","raw_affiliation_strings":["School of Computer Science and Technology, University of Science and Technology of China, Hefei, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computer Science and Technology, University of Science and Technology of China, Hefei, China","institution_ids":["https://openalex.org/I126520041"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100417461","display_name":"Jiali Wang","orcid":"https://orcid.org/0000-0002-4459-9284"},"institutions":[{"id":"https://openalex.org/I126520041","display_name":"University of Science and Technology of China","ror":"https://ror.org/04c4dkn09","country_code":"CN","type":"education","lineage":["https://openalex.org/I126520041","https://openalex.org/I19820366"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jiali Wang","raw_affiliation_strings":["School of Computer Science and Technology, University of Science and Technology of China, Hefei, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computer Science and Technology, University of Science and Technology of China, Hefei, China","institution_ids":["https://openalex.org/I126520041"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100419916","display_name":"Qingfeng Wang","orcid":"https://orcid.org/0000-0002-8299-2992"},"institutions":[{"id":"https://openalex.org/I126520041","display_name":"University of Science and Technology of China","ror":"https://ror.org/04c4dkn09","country_code":"CN","type":"education","lineage":["https://openalex.org/I126520041","https://openalex.org/I19820366"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Qingfeng Wang","raw_affiliation_strings":["School of Computer Science and Technology, University of Science and Technology of China, Hefei, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computer Science and Technology, University of Science and Technology of China, Hefei, China","institution_ids":["https://openalex.org/I126520041"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100407141","display_name":"Chao Wang","orcid":"https://orcid.org/0000-0003-4230-7441"},"institutions":[{"id":"https://openalex.org/I126520041","display_name":"University of Science and Technology of China","ror":"https://ror.org/04c4dkn09","country_code":"CN","type":"education","lineage":["https://openalex.org/I126520041","https://openalex.org/I19820366"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Chao Wang","raw_affiliation_strings":["School of Computer Science and Technology, University of Science and Technology of China, Hefei, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computer Science and Technology, University of Science and Technology of China, Hefei, China","institution_ids":["https://openalex.org/I126520041"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5077322091","display_name":"Xuehai Zhou","orcid":"https://orcid.org/0000-0002-8360-3143"},"institutions":[{"id":"https://openalex.org/I126520041","display_name":"University of Science and Technology of China","ror":"https://ror.org/04c4dkn09","country_code":"CN","type":"education","lineage":["https://openalex.org/I126520041","https://openalex.org/I19820366"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xuehai Zhou","raw_affiliation_strings":["School of Computer Science and Technology, University of Science and Technology of China, Hefei, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computer Science and Technology, University of Science and Technology of China, Hefei, China","institution_ids":["https://openalex.org/I126520041"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I126520041"],"apc_list":null,"apc_paid":null,"fwci":0.2243,"has_fulltext":false,"cited_by_count":3,"citation_normalized_percentile":{"value":0.57818674,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":94},"biblio":{"volume":"10","issue":null,"first_page":"485","last_page":"490"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9854999780654907,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9854999780654907,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.98089998960495,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9399999976158142,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8463249206542969},{"id":"https://openalex.org/keywords/scalability","display_name":"Scalability","score":0.8460620641708374},{"id":"https://openalex.org/keywords/cloud-computing","display_name":"Cloud computing","score":0.7974734902381897},{"id":"https://openalex.org/keywords/spark","display_name":"SPARK (programming language)","score":0.7564436793327332},{"id":"https://openalex.org/keywords/speedup","display_name":"Speedup","score":0.6927016377449036},{"id":"https://openalex.org/keywords/distributed-computing","display_name":"Distributed computing","score":0.6554792523384094},{"id":"https://openalex.org/keywords/component","display_name":"Component (thermodynamics)","score":0.5121169090270996},{"id":"https://openalex.org/keywords/distributed-database","display_name":"Distributed database","score":0.48574310541152954},{"id":"https://openalex.org/keywords/decision-support-system","display_name":"Decision support system","score":0.4555538594722748},{"id":"https://openalex.org/keywords/distributed-computing-environment","display_name":"Distributed Computing Environment","score":0.4155968129634857},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.3353801965713501},{"id":"https://openalex.org/keywords/parallel-computing","display_name":"Parallel computing","score":0.28542041778564453},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.2794487178325653},{"id":"https://openalex.org/keywords/operating-system","display_name":"Operating system","score":0.12441670894622803}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8463249206542969},{"id":"https://openalex.org/C48044578","wikidata":"https://www.wikidata.org/wiki/Q727490","display_name":"Scalability","level":2,"score":0.8460620641708374},{"id":"https://openalex.org/C79974875","wikidata":"https://www.wikidata.org/wiki/Q483639","display_name":"Cloud computing","level":2,"score":0.7974734902381897},{"id":"https://openalex.org/C2781215313","wikidata":"https://www.wikidata.org/wiki/Q3493345","display_name":"SPARK (programming language)","level":2,"score":0.7564436793327332},{"id":"https://openalex.org/C68339613","wikidata":"https://www.wikidata.org/wiki/Q1549489","display_name":"Speedup","level":2,"score":0.6927016377449036},{"id":"https://openalex.org/C120314980","wikidata":"https://www.wikidata.org/wiki/Q180634","display_name":"Distributed computing","level":1,"score":0.6554792523384094},{"id":"https://openalex.org/C168167062","wikidata":"https://www.wikidata.org/wiki/Q1117970","display_name":"Component (thermodynamics)","level":2,"score":0.5121169090270996},{"id":"https://openalex.org/C70061542","wikidata":"https://www.wikidata.org/wiki/Q989016","display_name":"Distributed database","level":2,"score":0.48574310541152954},{"id":"https://openalex.org/C107327155","wikidata":"https://www.wikidata.org/wiki/Q330268","display_name":"Decision support system","level":2,"score":0.4555538594722748},{"id":"https://openalex.org/C3739613","wikidata":"https://www.wikidata.org/wiki/Q679003","display_name":"Distributed Computing Environment","level":2,"score":0.4155968129634857},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.3353801965713501},{"id":"https://openalex.org/C173608175","wikidata":"https://www.wikidata.org/wiki/Q232661","display_name":"Parallel computing","level":1,"score":0.28542041778564453},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.2794487178325653},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.12441670894622803},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0},{"id":"https://openalex.org/C97355855","wikidata":"https://www.wikidata.org/wiki/Q11473","display_name":"Thermodynamics","level":1,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1109/bibm.2017.8217695","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibm.2017.8217695","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2017 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)","raw_type":"proceedings-article"},{"id":"pmh:oai:researchrepository.wvu.edu:faculty_publications-2306","is_oa":true,"landing_page_url":"https://researchrepository.wvu.edu/faculty_publications/1274","pdf_url":null,"source":{"id":"https://openalex.org/S4306402612","display_name":"The Research Repository @ WVU (West Virginia University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I12097938","host_organization_name":"West Virginia University","host_organization_lineage":["https://openalex.org/I12097938"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Faculty & Staff Scholarship","raw_type":"text"}],"best_oa_location":{"id":"pmh:oai:researchrepository.wvu.edu:faculty_publications-2306","is_oa":true,"landing_page_url":"https://researchrepository.wvu.edu/faculty_publications/1274","pdf_url":null,"source":{"id":"https://openalex.org/S4306402612","display_name":"The Research Repository @ WVU (West Virginia University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I12097938","host_organization_name":"West Virginia University","host_organization_lineage":["https://openalex.org/I12097938"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Faculty & Staff Scholarship","raw_type":"text"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":17,"referenced_works":["https://openalex.org/W1605032987","https://openalex.org/W1919257374","https://openalex.org/W1989017925","https://openalex.org/W2038157364","https://openalex.org/W2095680943","https://openalex.org/W2096220103","https://openalex.org/W2103441770","https://openalex.org/W2119738171","https://openalex.org/W2189465200","https://openalex.org/W2398924165","https://openalex.org/W2562544223","https://openalex.org/W2575250966","https://openalex.org/W2756099462","https://openalex.org/W4247053599","https://openalex.org/W4256053389","https://openalex.org/W4394666350","https://openalex.org/W6687322159"],"related_works":["https://openalex.org/W3009866696","https://openalex.org/W1779606629","https://openalex.org/W127900883","https://openalex.org/W997248972","https://openalex.org/W2368240274","https://openalex.org/W2539081058","https://openalex.org/W2013919567","https://openalex.org/W2509957587","https://openalex.org/W2008246492","https://openalex.org/W2152545933"],"abstract_inverted_index":{"The":[0,19],"clinical":[1,57],"decision":[2,58],"support":[3,59],"system":[4],"can":[5],"effectively":[6],"solve":[7],"the":[8,29,41,77],"limitations":[9],"of":[10,44,80],"doctors'":[11],"knowledge,":[12],"reduce":[13],"misdiagnosis":[14],"and":[15,24,106,113],"help":[16],"enhance":[17],"health.":[18],"traditional":[20],"genetic":[21,46],"data":[22,47,78],"storage":[23],"analysis":[25],"technology":[26],"based":[27,70],"on":[28,71,99],"stand-alone":[30],"environment":[31],"have":[32],"limited":[33],"scalability,":[34],"which":[35,61],"has":[36],"been":[37],"difficult":[38],"to":[39,96,123],"meet":[40],"computational":[42],"requirements":[43],"rapid":[45],"growth.":[48],"In":[49],"this":[50],"paper,":[51],"we":[52,82],"propose":[53],"a":[54,68,84],"distributed":[55,86,118],"gene":[56],"system,":[60],"is":[62],"named":[63],"as":[64],"GCDSS.":[65],"We":[66],"implemented":[67],"prototype":[69],"cloud":[72],"computing.":[73],"To":[74],"speed":[75],"up":[76,122],"processing":[79,94],"GCDSS,":[81],"present":[83],"novel":[85],"read":[87],"mapping":[88],"algorithm":[89],"CloudBWA":[90,109,120],"that":[91,104],"leverages":[92],"batch":[93],"strategy":[95],"map":[97],"reads":[98],"Apache":[100],"Spark.":[101],"Evaluations":[102],"show":[103],"GCDSS":[105],"its":[107],"component":[108],"achieve":[110],"outstanding":[111],"performance":[112],"excellent":[114],"scalability.":[115],"Compared":[116],"with":[117],"algorithms,":[119],"achieves":[121],"2.63":[124],"times":[125],"speedup":[126],"over":[127],"SparkBWA.":[128]},"counts_by_year":[{"year":2022,"cited_by_count":1},{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":1}],"updated_date":"2026-06-26T08:34:08.712188","created_date":"2025-10-10T00:00:00"}
