{"id":"https://openalex.org/W2575293358","doi":"https://doi.org/10.1109/bibm.2016.7822644","title":"An evaluation of data replication for bioinformatics workflows on NoSQL systems","display_name":"An evaluation of data replication for bioinformatics workflows on NoSQL systems","publication_year":2016,"publication_date":"2016-12-01","ids":{"openalex":"https://openalex.org/W2575293358","doi":"https://doi.org/10.1109/bibm.2016.7822644","mag":"2575293358"},"language":"en","primary_location":{"id":"doi:10.1109/bibm.2016.7822644","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibm.2016.7822644","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2016 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5039776549","display_name":"Iasmini Virg\u00ednia Oliveira Lima","orcid":null},"institutions":[{"id":"https://openalex.org/I150729083","display_name":"Universidade de Bras\u00edlia","ror":"https://ror.org/02xfp8v59","country_code":"BR","type":"education","lineage":["https://openalex.org/I150729083"]}],"countries":["BR"],"is_corresponding":true,"raw_author_name":"Iasmini Lima","raw_affiliation_strings":["Department of Computer Science, University of Brasilia"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of Brasilia","institution_ids":["https://openalex.org/I150729083"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101815912","display_name":"Matheus Oliveira","orcid":"https://orcid.org/0000-0002-4522-0221"},"institutions":[{"id":"https://openalex.org/I150729083","display_name":"Universidade de Bras\u00edlia","ror":"https://ror.org/02xfp8v59","country_code":"BR","type":"education","lineage":["https://openalex.org/I150729083"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Matheus Oliveira","raw_affiliation_strings":["Department of Computer Science, University of Brasilia"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of Brasilia","institution_ids":["https://openalex.org/I150729083"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5009355753","display_name":"Diego Kieckbusch","orcid":null},"institutions":[{"id":"https://openalex.org/I150729083","display_name":"Universidade de Bras\u00edlia","ror":"https://ror.org/02xfp8v59","country_code":"BR","type":"education","lineage":["https://openalex.org/I150729083"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Diego Kieckbusch","raw_affiliation_strings":["Department of Computer Science, University of Brasilia"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of Brasilia","institution_ids":["https://openalex.org/I150729083"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5054089208","display_name":"Maristela Holanda","orcid":"https://orcid.org/0000-0002-0883-2579"},"institutions":[{"id":"https://openalex.org/I150729083","display_name":"Universidade de Bras\u00edlia","ror":"https://ror.org/02xfp8v59","country_code":"BR","type":"education","lineage":["https://openalex.org/I150729083"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Maristela Holanda","raw_affiliation_strings":["Department of Computer Science, University of Brasilia"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of Brasilia","institution_ids":["https://openalex.org/I150729083"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5071276748","display_name":"Maria Em\u00edlia M. T. Walter","orcid":"https://orcid.org/0000-0001-6822-931X"},"institutions":[{"id":"https://openalex.org/I150729083","display_name":"Universidade de Bras\u00edlia","ror":"https://ror.org/02xfp8v59","country_code":"BR","type":"education","lineage":["https://openalex.org/I150729083"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Maria Emilia M. T. Walter","raw_affiliation_strings":["Department of Computer Science, University of Brasilia"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of Brasilia","institution_ids":["https://openalex.org/I150729083"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5031701924","display_name":"Alet\u00e9ia Ara\u00fajo","orcid":"https://orcid.org/0000-0003-4645-6700"},"institutions":[{"id":"https://openalex.org/I150729083","display_name":"Universidade de Bras\u00edlia","ror":"https://ror.org/02xfp8v59","country_code":"BR","type":"education","lineage":["https://openalex.org/I150729083"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Aleteia Araujo","raw_affiliation_strings":["Department of Computer Science, University of Brasilia"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of Brasilia","institution_ids":["https://openalex.org/I150729083"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5026224413","display_name":"M\u00e1rcio Victorino","orcid":"https://orcid.org/0000-0003-2785-8958"},"institutions":[{"id":"https://openalex.org/I150729083","display_name":"Universidade de Bras\u00edlia","ror":"https://ror.org/02xfp8v59","country_code":"BR","type":"education","lineage":["https://openalex.org/I150729083"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Marcio Victorino","raw_affiliation_strings":["Department of Computer Science, University of Brasilia"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of Brasilia","institution_ids":["https://openalex.org/I150729083"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5004814984","display_name":"Waldeyr Mendes Cordeiro da Silva","orcid":"https://orcid.org/0000-0002-8660-6331"},"institutions":[{"id":"https://openalex.org/I4210096427","display_name":"Institut des Sciences Biologiques","ror":"https://ror.org/00rydyx93","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I4210096427"]},{"id":"https://openalex.org/I150729083","display_name":"Universidade de Bras\u00edlia","ror":"https://ror.org/02xfp8v59","country_code":"BR","type":"education","lineage":["https://openalex.org/I150729083"]}],"countries":["BR","FR"],"is_corresponding":false,"raw_author_name":"Waldeyr M. C. Silva","raw_affiliation_strings":["University of Brasilia, Institute of Biological Sciences"],"affiliations":[{"raw_affiliation_string":"University of Brasilia, Institute of Biological Sciences","institution_ids":["https://openalex.org/I4210096427","https://openalex.org/I150729083"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5085416987","display_name":"S\u00e9rgio Lifschitz","orcid":"https://orcid.org/0000-0003-3073-3734"},"institutions":[{"id":"https://openalex.org/I2699952","display_name":"Pontifical Catholic University of Rio de Janeiro","ror":"https://ror.org/01dg47b60","country_code":"BR","type":"education","lineage":["https://openalex.org/I2699952"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Sergio Lifschitz","raw_affiliation_strings":["Department of Informatics, Pontifical Catholic University of Rio de Janeiro"],"affiliations":[{"raw_affiliation_string":"Department of Informatics, Pontifical Catholic University of Rio de Janeiro","institution_ids":["https://openalex.org/I2699952"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":9,"corresponding_author_ids":["https://openalex.org/A5039776549"],"corresponding_institution_ids":["https://openalex.org/I150729083"],"apc_list":null,"apc_paid":null,"fwci":1.7725,"has_fulltext":false,"cited_by_count":4,"citation_normalized_percentile":{"value":0.91246996,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":94},"biblio":{"volume":"12","issue":null,"first_page":"896","last_page":"901"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9908999800682068,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},"topics":[{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9908999800682068,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},{"id":"https://openalex.org/T10101","display_name":"Cloud Computing and Resource Management","score":0.9811000227928162,"subfield":{"id":"https://openalex.org/subfields/1710","display_name":"Information Systems"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10772","display_name":"Distributed systems and fault tolerance","score":0.9527999758720398,"subfield":{"id":"https://openalex.org/subfields/1705","display_name":"Computer Networks and Communications"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/nosql","display_name":"NoSQL","score":0.9805005788803101},{"id":"https://openalex.org/keywords/workflow","display_name":"Workflow","score":0.8595085144042969},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8007311224937439},{"id":"https://openalex.org/keywords/replication","display_name":"Replication (statistics)","score":0.7824270129203796},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.5557050704956055},{"id":"https://openalex.org/keywords/distributed-database","display_name":"Distributed database","score":0.5428583025932312},{"id":"https://openalex.org/keywords/volume","display_name":"Volume (thermodynamics)","score":0.47577252984046936},{"id":"https://openalex.org/keywords/data-management","display_name":"Data management","score":0.42834946513175964},{"id":"https://openalex.org/keywords/big-data","display_name":"Big data","score":0.39155930280685425},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.35987740755081177},{"id":"https://openalex.org/keywords/distributed-computing","display_name":"Distributed computing","score":0.33268484473228455},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.28816595673561096}],"concepts":[{"id":"https://openalex.org/C2779599972","wikidata":"https://www.wikidata.org/wiki/Q82231","display_name":"NoSQL","level":3,"score":0.9805005788803101},{"id":"https://openalex.org/C177212765","wikidata":"https://www.wikidata.org/wiki/Q627335","display_name":"Workflow","level":2,"score":0.8595085144042969},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8007311224937439},{"id":"https://openalex.org/C12590798","wikidata":"https://www.wikidata.org/wiki/Q3933199","display_name":"Replication (statistics)","level":2,"score":0.7824270129203796},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.5557050704956055},{"id":"https://openalex.org/C70061542","wikidata":"https://www.wikidata.org/wiki/Q989016","display_name":"Distributed database","level":2,"score":0.5428583025932312},{"id":"https://openalex.org/C20556612","wikidata":"https://www.wikidata.org/wiki/Q4469374","display_name":"Volume (thermodynamics)","level":2,"score":0.47577252984046936},{"id":"https://openalex.org/C1668388","wikidata":"https://www.wikidata.org/wiki/Q1149776","display_name":"Data management","level":2,"score":0.42834946513175964},{"id":"https://openalex.org/C75684735","wikidata":"https://www.wikidata.org/wiki/Q858810","display_name":"Big data","level":2,"score":0.39155930280685425},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.35987740755081177},{"id":"https://openalex.org/C120314980","wikidata":"https://www.wikidata.org/wiki/Q180634","display_name":"Distributed computing","level":1,"score":0.33268484473228455},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.28816595673561096},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.0},{"id":"https://openalex.org/C62520636","wikidata":"https://www.wikidata.org/wiki/Q944","display_name":"Quantum mechanics","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/bibm.2016.7822644","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibm.2016.7822644","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2016 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[{"score":0.4399999976158142,"display_name":"Industry, innovation and infrastructure","id":"https://metadata.un.org/sdg/9"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320321091","display_name":"Coordena\u00e7\u00e3o de Aperfei\u00e7oamento de Pessoal de N\u00edvel Superior","ror":"https://ror.org/00x0ma614"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":32,"referenced_works":["https://openalex.org/W205135346","https://openalex.org/W1486163216","https://openalex.org/W1514243641","https://openalex.org/W1800630092","https://openalex.org/W1968275812","https://openalex.org/W1989737805","https://openalex.org/W1994924643","https://openalex.org/W2011339461","https://openalex.org/W2011657487","https://openalex.org/W2062668209","https://openalex.org/W2064762429","https://openalex.org/W2080071958","https://openalex.org/W2084568010","https://openalex.org/W2087946700","https://openalex.org/W2097065948","https://openalex.org/W2111179725","https://openalex.org/W2117267833","https://openalex.org/W2118848309","https://openalex.org/W2121180999","https://openalex.org/W2126419817","https://openalex.org/W2153911335","https://openalex.org/W2165293958","https://openalex.org/W2170551349","https://openalex.org/W2184776329","https://openalex.org/W2216827723","https://openalex.org/W2310259903","https://openalex.org/W2486457270","https://openalex.org/W2498550091","https://openalex.org/W2533105572","https://openalex.org/W2963391732","https://openalex.org/W4234272173","https://openalex.org/W6686353889"],"related_works":["https://openalex.org/W2799973158","https://openalex.org/W2419153746","https://openalex.org/W3089119258","https://openalex.org/W2923327995","https://openalex.org/W2518340158","https://openalex.org/W3147331693","https://openalex.org/W2372084460","https://openalex.org/W304439565","https://openalex.org/W2064093371","https://openalex.org/W3214050359"],"abstract_inverted_index":{"Many":[0],"research":[1],"projects":[2],"in":[3,22,65],"bioinformatics":[4],"may":[5],"be":[6,43,55],"viewed":[7],"as":[8],"scientific":[9,80],"workflows.":[10],"Biologists":[11],"often":[12],"run":[13],"multiple":[14],"times":[15],"the":[16,77],"same":[17],"workflow":[18],"with":[19,37,59],"different":[20,38],"parameters":[21],"order":[23],"to":[24,42,57],"refine":[25],"their":[26],"data":[27,72],"analysis.":[28],"These":[29],"executions":[30],"generate":[31],"a":[32,71],"large":[33,60],"volume":[34],"of":[35,62,79],"files":[36],"formats,":[39],"which":[40],"need":[41],"stored":[44],"for":[45,82],"future":[46],"evaluations.":[47],"New":[48],"database":[49,85],"models,":[50],"like":[51],"NoSQL":[52,84],"systems,":[53],"could":[54],"considered":[56],"deal":[58],"volumes":[61],"data,":[63],"particularly":[64],"distributed":[66],"systems.":[67],"This":[68],"work":[69],"presents":[70],"replication":[73],"impact":[74],"assessment":[75],"from":[76],"execution":[78],"workflows":[81],"two":[83],"management":[86],"systems:":[87],"Cassandra":[88],"and":[89],"MongoDB.":[90]},"counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2020,"cited_by_count":1},{"year":2018,"cited_by_count":1},{"year":2017,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
