{"id":"https://openalex.org/W2572109604","doi":"https://doi.org/10.1109/bibm.2016.7822597","title":"L&lt;inf&gt;21&lt;/inf&gt;-iPaD: An efficient method for drug-pathway association pairs inference","display_name":"L&lt;inf&gt;21&lt;/inf&gt;-iPaD: An efficient method for drug-pathway association pairs inference","publication_year":2016,"publication_date":"2016-12-01","ids":{"openalex":"https://openalex.org/W2572109604","doi":"https://doi.org/10.1109/bibm.2016.7822597","mag":"2572109604"},"language":"en","primary_location":{"id":"doi:10.1109/bibm.2016.7822597","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibm.2016.7822597","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2016 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)","raw_type":"proceedings-article"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5034004890","display_name":"Dongqin Wang","orcid":null},"institutions":[{"id":"https://openalex.org/I202126657","display_name":"Qufu Normal University","ror":"https://ror.org/03ceheh96","country_code":"CN","type":"education","lineage":["https://openalex.org/I202126657"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Dong-Qin Wang","raw_affiliation_strings":["School of Information Science and Engineering, Qufu Normal University, Rizhao, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Information Science and Engineering, Qufu Normal University, Rizhao, China","institution_ids":["https://openalex.org/I202126657"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5064185915","display_name":"Chun-Hou Zheng","orcid":"https://orcid.org/0000-0002-2695-1926"},"institutions":[{"id":"https://openalex.org/I202126657","display_name":"Qufu Normal University","ror":"https://ror.org/03ceheh96","country_code":"CN","type":"education","lineage":["https://openalex.org/I202126657"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Chun-Hou Zheng","raw_affiliation_strings":["School of Information Science and Engineering, Qufu Normal University, Rizhao, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Information Science and Engineering, Qufu Normal University, Rizhao, China","institution_ids":["https://openalex.org/I202126657"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5026569643","display_name":"Ying-Lian Gao","orcid":"https://orcid.org/0000-0003-0483-5622"},"institutions":[{"id":"https://openalex.org/I202126657","display_name":"Qufu Normal University","ror":"https://ror.org/03ceheh96","country_code":"CN","type":"education","lineage":["https://openalex.org/I202126657"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Ying-Lian Gao","raw_affiliation_strings":["Library of Qufu Normal University, Qufu Normal University, Rizhao, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Library of Qufu Normal University, Qufu Normal University, Rizhao, China","institution_ids":["https://openalex.org/I202126657"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5073144090","display_name":"Jin\u2010Xing Liu","orcid":"https://orcid.org/0000-0001-6104-2149"},"institutions":[{"id":"https://openalex.org/I202126657","display_name":"Qufu Normal University","ror":"https://ror.org/03ceheh96","country_code":"CN","type":"education","lineage":["https://openalex.org/I202126657"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jin-Xing Liu","raw_affiliation_strings":["School of Information Science and Engineering, Qufu Normal University, Rizhao, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Information Science and Engineering, Qufu Normal University, Rizhao, China","institution_ids":["https://openalex.org/I202126657"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5103014265","display_name":"Shasha Wu","orcid":null},"institutions":[{"id":"https://openalex.org/I202126657","display_name":"Qufu Normal University","ror":"https://ror.org/03ceheh96","country_code":"CN","type":"education","lineage":["https://openalex.org/I202126657"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Sha-Sha Wu","raw_affiliation_strings":["School of Information Science and Engineering, Qufu Normal University, Rizhao, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Information Science and Engineering, Qufu Normal University, Rizhao, China","institution_ids":["https://openalex.org/I202126657"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5007539735","display_name":"Junliang Shang","orcid":"https://orcid.org/0000-0002-8488-2228"},"institutions":[{"id":"https://openalex.org/I202126657","display_name":"Qufu Normal University","ror":"https://ror.org/03ceheh96","country_code":"CN","type":"education","lineage":["https://openalex.org/I202126657"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jun-Liang Shang","raw_affiliation_strings":["School of Information Science and Engineering, Qufu Normal University, Rizhao, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Information Science and Engineering, Qufu Normal University, Rizhao, China","institution_ids":["https://openalex.org/I202126657"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I202126657"],"apc_list":null,"apc_paid":null,"fwci":0.3101,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":{"value":0.51080218,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":94},"biblio":{"volume":null,"issue":null,"first_page":"664","last_page":"669"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9814000129699707,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/inference","display_name":"Inference","score":0.6583750247955322},{"id":"https://openalex.org/keywords/association","display_name":"Association (psychology)","score":0.6270753741264343},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.509479820728302},{"id":"https://openalex.org/keywords/arithmetic","display_name":"Arithmetic","score":0.32689228653907776},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.2864128351211548},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.2588983178138733},{"id":"https://openalex.org/keywords/philosophy","display_name":"Philosophy","score":0.18467199802398682},{"id":"https://openalex.org/keywords/epistemology","display_name":"Epistemology","score":0.08373555541038513}],"concepts":[{"id":"https://openalex.org/C2776214188","wikidata":"https://www.wikidata.org/wiki/Q408386","display_name":"Inference","level":2,"score":0.6583750247955322},{"id":"https://openalex.org/C142853389","wikidata":"https://www.wikidata.org/wiki/Q744778","display_name":"Association (psychology)","level":2,"score":0.6270753741264343},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.509479820728302},{"id":"https://openalex.org/C94375191","wikidata":"https://www.wikidata.org/wiki/Q11205","display_name":"Arithmetic","level":1,"score":0.32689228653907776},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.2864128351211548},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.2588983178138733},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.18467199802398682},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.08373555541038513}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/bibm.2016.7822597","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibm.2016.7822597","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2016 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[{"display_name":"Good health and well-being","score":0.6700000166893005,"id":"https://metadata.un.org/sdg/3"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320337348","display_name":"National Human Genome Research Institute","ror":"https://ror.org/00baak391"},{"id":"https://openalex.org/F4320337351","display_name":"National Cancer Institute","ror":"https://ror.org/040gcmg81"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":24,"referenced_works":["https://openalex.org/W1533908463","https://openalex.org/W2011250979","https://openalex.org/W2023221658","https://openalex.org/W2033591223","https://openalex.org/W2053090063","https://openalex.org/W2085034490","https://openalex.org/W2089744178","https://openalex.org/W2104133425","https://openalex.org/W2105709960","https://openalex.org/W2130410032","https://openalex.org/W2133807576","https://openalex.org/W2146130798","https://openalex.org/W2148861142","https://openalex.org/W2157751286","https://openalex.org/W2162316550","https://openalex.org/W2167010218","https://openalex.org/W2318912401","https://openalex.org/W2402014506","https://openalex.org/W2418858918","https://openalex.org/W3003365835","https://openalex.org/W6675968127","https://openalex.org/W6682042988","https://openalex.org/W6683252356","https://openalex.org/W6700127572"],"related_works":["https://openalex.org/W4391375266","https://openalex.org/W2748952813","https://openalex.org/W2390279801","https://openalex.org/W2358668433","https://openalex.org/W4396701345","https://openalex.org/W2376932109","https://openalex.org/W2001405890","https://openalex.org/W4396696052","https://openalex.org/W4402327032","https://openalex.org/W2382290278"],"abstract_inverted_index":{"Pathway-based":[0],"drug":[1],"discovery":[2],"overcomes":[3],"the":[4,7,16,29,35,39,47,50,58,72,77,81,105,113,117,126,129,138,156,160],"disadvantages":[5],"of":[6,49,128,147,162],"\u201cone":[8],"drug-one":[9],"target\u201d":[10],"method,":[11,74,140],"which":[12],"aims":[13],"to":[14,19,45,56,90,104,124],"find":[15,57],"effective":[17,55],"drugs":[18],"act":[20],"on":[21,38,80,155],"single":[22],"targets.":[23],"The":[24,152],"current":[25],"method":[26,67,89,101,110,119,142],"\u201ciPaD\u201d":[27],"identities":[28],"drug-pathway":[30,40,60,82,131,149],"association":[31,41,61,83,132,150],"pairs":[32],"by":[33,120],"taking":[34],"lasso-type":[36],"penalty":[37],"matrix.":[42,85],"In":[43],"order":[44],"enhance":[46],"robustness":[48],"methods":[51],"and":[52],"be":[53],"more":[54],"novel":[59],"pairs,":[62],"we":[63,75,97],"introduce":[64],"a":[65,91],"new":[66],"named":[68],"\u201cL2,1-iPaD\u201d.":[69],"Compared":[70],"with":[71,137],"iPaD":[73,106,118,139],"impose":[76],"L2,1-norm":[78],"constraint":[79],"coefficient":[84],"By":[86],"applying":[87],"our":[88,100,109,141,163],"real":[92,157],"widely":[93],"datasets":[94],"(CCLE":[95],"dataset),":[96],"demonstrate":[98,159],"that":[99],"is":[102],"superior":[103],"method.":[107,164],"And":[108],"can":[111,143],"obtain":[112],"smaller":[114],"P-values":[115],"than":[116],"performing":[121],"permutation":[122],"test":[123],"assess":[125],"significance":[127],"identified":[130],"pairs.":[133,151],"More":[134],"importantly,":[135],"compared":[136],"identify":[144],"larger":[145],"numbers":[146],"validated":[148],"experimental":[153],"results":[154],"dataset":[158],"effectiveness":[161]},"counts_by_year":[{"year":2019,"cited_by_count":1}],"updated_date":"2026-07-29T14:22:42.915294","created_date":"2025-10-10T00:00:00"}
