{"id":"https://openalex.org/W2218796990","doi":"https://doi.org/10.1109/bibm.2015.7359934","title":"Plugin for concept-assisted search and navigation on PUBMED","display_name":"Plugin for concept-assisted search and navigation on PUBMED","publication_year":2015,"publication_date":"2015-11-01","ids":{"openalex":"https://openalex.org/W2218796990","doi":"https://doi.org/10.1109/bibm.2015.7359934","mag":"2218796990"},"language":"en","primary_location":{"id":"doi:10.1109/bibm.2015.7359934","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibm.2015.7359934","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2015 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5048964981","display_name":"Thomas Joseph","orcid":"https://orcid.org/0000-0001-7808-0301"},"institutions":[],"countries":[],"is_corresponding":true,"raw_author_name":"Thomas Joseph","raw_affiliation_strings":["TCS Innovation Labs, 1, Software Units Layout, Madhapur, Hyderabad, India"],"affiliations":[{"raw_affiliation_string":"TCS Innovation Labs, 1, Software Units Layout, Madhapur, Hyderabad, India","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5005957651","display_name":"Vangala Govindakrishnan Saipradeep","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Vangala Govindakrishnan Saipradeep","raw_affiliation_strings":["TCS Innovation Labs, 1, Software Units Layout, Madhapur, Hyderabad, India"],"affiliations":[{"raw_affiliation_string":"TCS Innovation Labs, 1, Software Units Layout, Madhapur, Hyderabad, India","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5030581364","display_name":"Sujatha Kotte","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Sujatha Kotte","raw_affiliation_strings":["TCS Innovation Labs, 1, Software Units Layout, Madhapur, Hyderabad, India"],"affiliations":[{"raw_affiliation_string":"TCS Innovation Labs, 1, Software Units Layout, Madhapur, Hyderabad, India","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5057625831","display_name":"Aditya Rao","orcid":"https://orcid.org/0000-0002-7161-737X"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Aditya Rao","raw_affiliation_strings":["TCS Innovation Labs, 1, Software Units Layout, Madhapur, Hyderabad, India"],"affiliations":[{"raw_affiliation_string":"TCS Innovation Labs, 1, Software Units Layout, Madhapur, Hyderabad, India","institution_ids":[]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5112449421","display_name":"Rajgopal Srinivasan","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Rajgopal Srinivasan","raw_affiliation_strings":["TCS Innovation Labs, 1, Software Units Layout, Madhapur, Hyderabad, India"],"affiliations":[{"raw_affiliation_string":"TCS Innovation Labs, 1, Software Units Layout, Madhapur, Hyderabad, India","institution_ids":[]}]}],"institutions":[],"countries_distinct_count":0,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5048964981"],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.8629,"has_fulltext":false,"cited_by_count":2,"citation_normalized_percentile":{"value":0.82850176,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":94},"biblio":{"volume":"40","issue":null,"first_page":"1712","last_page":"1714"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10215","display_name":"Semantic Web and Ontologies","score":0.9947999715805054,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10215","display_name":"Semantic Web and Ontologies","score":0.9947999715805054,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10906","display_name":"AI-based Problem Solving and Planning","score":0.9848999977111816,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10679","display_name":"Service-Oriented Architecture and Web Services","score":0.9771000146865845,"subfield":{"id":"https://openalex.org/subfields/1710","display_name":"Information Systems"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/plug-in","display_name":"Plug-in","score":0.7893854379653931},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7265151739120483},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.5210834741592407},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.3408570885658264},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.2825053930282593}],"concepts":[{"id":"https://openalex.org/C4924752","wikidata":"https://www.wikidata.org/wiki/Q184148","display_name":"Plug-in","level":2,"score":0.7893854379653931},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7265151739120483},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.5210834741592407},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.3408570885658264},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.2825053930282593}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/bibm.2015.7359934","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibm.2015.7359934","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2015 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":10,"referenced_works":["https://openalex.org/W1987522618","https://openalex.org/W2006815402","https://openalex.org/W2045016337","https://openalex.org/W2089199911","https://openalex.org/W2096525273","https://openalex.org/W2132812398","https://openalex.org/W2154142897","https://openalex.org/W2162965868","https://openalex.org/W4404225840","https://openalex.org/W6812507239"],"related_works":["https://openalex.org/W4391375266","https://openalex.org/W2748952813","https://openalex.org/W47352601","https://openalex.org/W2981957539","https://openalex.org/W4287378204","https://openalex.org/W2545422590","https://openalex.org/W4240705470","https://openalex.org/W2945311252","https://openalex.org/W631546281","https://openalex.org/W4206501676"],"abstract_inverted_index":{"Introduction:":[0],"Search":[1],"of":[2,20,36,70,81,84,91,155,178,191,262,280,295],"MEDLINE":[3,72],"using":[4,136],"the":[5,18,37,71,77,82,85,101,122,131,156,182,188,215,222,232,247,254,267,281,296],"PUBMED":[6,23],"interface":[7,27,194],"still":[8],"remains":[9],"a":[10,25,57,112,137,290],"preferred":[11],"approach":[12],"for":[13,28,109,129,173,195,243,307],"many":[14],"scientists,":[15],"even":[16],"in":[17,52,76,100,121,160,246,253],"presence":[19],"alternatives.":[21],"While":[22],"provides":[24],"rich":[26],"querying,":[29],"it":[30],"does":[31],"not":[32],"provide":[33,47],"deep":[34],"analysis":[35,279],"query":[38,234],"results":[39,103,123,283],"to":[40,106,115,199,231],"refine":[41],"queries":[42],"and":[43,68,89,142,147,171,175,211,219,238,277,284],"build":[44],"hypotheses.":[45],"To":[46],"an":[48,302],"improved":[49],"search":[50,67,193,233,248,256,282,305],"experience":[51],"PubMed,":[53],"we":[54],"have":[55],"developed":[56],"Firefox":[58],"browser":[59,291],"plugin":[60,86,157,292,301],"called":[61],"\u201cTPX":[62],"plus\u201d":[63],"that":[64,162],"enables":[65],"concept-assisted":[66],"navigation":[69],"database":[73],"while":[74],"remaining":[75],"PubMed":[78,102,183,212,265,272,297,304],"website.":[79],"Some":[80],"features":[83],"include":[87],"identification":[88],"highlighting":[90],"biomedical":[92,225,241],"concept":[93,236],"types":[94],"like":[95],"genes,":[96],"processes,":[97],"diseases":[98],"etc.":[99],"page;":[104],"link-outs":[105],"dictionary":[107],"sources":[108],"identified":[110,119],"terms;":[111],"Concept":[113],"Explorer":[114],"view":[116,252],"ranked":[117,224],"automatically":[118],"concepts":[120,135,226,242],"as":[124,126,168,207,266,289],"well":[125],"use":[127,294],"them":[128],"filtering/refining":[130],"search;":[132],"deriving":[133],"related":[134],"statistical":[138],"concept-associations":[139],"network;":[140],"bookmarking":[141],"managing":[143],"articles,":[144],"storing":[145],"notes":[146],"sharing":[148],"comments":[149],"on":[150,228,264],"articles.":[151],"Implementation:":[152],"The":[153],"core":[154],"is":[158],"written":[159],"JavaScript":[161],"uses":[163,187],"Web":[164],"2.0":[165],"technologies":[166],"such":[167,206],"jQuery,":[169],"AJAXlJSON":[170],"XUL":[172],"handling":[174],"manipulating":[176],"content":[177,205],"web":[179],"pages":[180],"within":[181],"domain.":[184],"'TPX":[185],"plus'":[186],"DOM":[189,217],"structure":[190],"PubMed's":[192,255],"a)":[196],"building":[197],"input":[198],"Annotation":[200],"server":[201],"by":[202,273],"extracting":[203],"appropriate":[204,216],"title,":[208],"abstract":[209,245],"text":[210],"ID":[213],"from":[214],"elements":[218],"b)":[220],"presenting":[221],"top":[223],"based":[227],"their":[229],"relevance":[230],"under":[235,250],"explorer":[237],"c)":[239],"highlight":[240],"each":[244],"result":[249],"article":[251],"interface.":[257],"Conclusion:":[258],"Its":[259],"three-pronged":[260],"nature":[261],"relying":[263],"basic":[268],"indexing":[269],"engine,":[270],"enhancing":[271],"performing":[274],"customized":[275],"offline":[276],"on-the-fly":[278],"most":[285],"importantly":[286],"being":[287],"available":[288],"allowing":[293],"user-interface":[298],"makes":[299],"this":[300],"ideal":[303],"assistant":[306],"scientists.":[308]},"counts_by_year":[{"year":2017,"cited_by_count":1},{"year":2016,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
