{"id":"https://openalex.org/W2216827723","doi":"https://doi.org/10.1109/bibm.2015.7359902","title":"A study of genomic data provenance in NoSQL document-oriented database systems","display_name":"A study of genomic data provenance in NoSQL document-oriented database systems","publication_year":2015,"publication_date":"2015-11-01","ids":{"openalex":"https://openalex.org/W2216827723","doi":"https://doi.org/10.1109/bibm.2015.7359902","mag":"2216827723"},"language":"en","primary_location":{"id":"doi:10.1109/bibm.2015.7359902","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibm.2015.7359902","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2015 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5013619525","display_name":"Val\u00e9ria Monteze Guimar\u00e3es","orcid":"https://orcid.org/0000-0002-0735-6144"},"institutions":[{"id":"https://openalex.org/I150729083","display_name":"Universidade de Bras\u00edlia","ror":"https://ror.org/02xfp8v59","country_code":"BR","type":"education","lineage":["https://openalex.org/I150729083"]}],"countries":["BR"],"is_corresponding":true,"raw_author_name":"Valeria Guimaraes","raw_affiliation_strings":["Universidade de Brasilia, Brasilia, DF, BR"],"affiliations":[{"raw_affiliation_string":"Universidade de Brasilia, Brasilia, DF, BR","institution_ids":["https://openalex.org/I150729083"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5005756310","display_name":"Fernanda Hondo","orcid":"https://orcid.org/0009-0008-9982-3547"},"institutions":[{"id":"https://openalex.org/I150729083","display_name":"Universidade de Bras\u00edlia","ror":"https://ror.org/02xfp8v59","country_code":"BR","type":"education","lineage":["https://openalex.org/I150729083"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Fernanda Hondo","raw_affiliation_strings":["Universidade de Brasilia, Brasilia, DF, BR"],"affiliations":[{"raw_affiliation_string":"Universidade de Brasilia, Brasilia, DF, BR","institution_ids":["https://openalex.org/I150729083"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5021715300","display_name":"Rodrigo Bonif\u00e1cio","orcid":"https://orcid.org/0000-0002-2380-2829"},"institutions":[{"id":"https://openalex.org/I150729083","display_name":"Universidade de Bras\u00edlia","ror":"https://ror.org/02xfp8v59","country_code":"BR","type":"education","lineage":["https://openalex.org/I150729083"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Rodrigo Almeida","raw_affiliation_strings":["Universidade de Brasilia, Brasilia, DF, BR"],"affiliations":[{"raw_affiliation_string":"Universidade de Brasilia, Brasilia, DF, BR","institution_ids":["https://openalex.org/I150729083"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5022662140","display_name":"Harley Vera Olivera","orcid":"https://orcid.org/0000-0003-2011-8797"},"institutions":[{"id":"https://openalex.org/I150729083","display_name":"Universidade de Bras\u00edlia","ror":"https://ror.org/02xfp8v59","country_code":"BR","type":"education","lineage":["https://openalex.org/I150729083"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Harley Vera","raw_affiliation_strings":["Universidade de Brasilia, Brasilia, DF, BR"],"affiliations":[{"raw_affiliation_string":"Universidade de Brasilia, Brasilia, DF, BR","institution_ids":["https://openalex.org/I150729083"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5054089208","display_name":"Maristela Holanda","orcid":"https://orcid.org/0000-0002-0883-2579"},"institutions":[{"id":"https://openalex.org/I150729083","display_name":"Universidade de Bras\u00edlia","ror":"https://ror.org/02xfp8v59","country_code":"BR","type":"education","lineage":["https://openalex.org/I150729083"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Maristela Holanda","raw_affiliation_strings":["Universidade de Brasilia, Brasilia, DF, BR"],"affiliations":[{"raw_affiliation_string":"Universidade de Brasilia, Brasilia, DF, BR","institution_ids":["https://openalex.org/I150729083"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5031701924","display_name":"Alet\u00e9ia Ara\u00fajo","orcid":"https://orcid.org/0000-0003-4645-6700"},"institutions":[{"id":"https://openalex.org/I150729083","display_name":"Universidade de Bras\u00edlia","ror":"https://ror.org/02xfp8v59","country_code":"BR","type":"education","lineage":["https://openalex.org/I150729083"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Aleteia Araujo","raw_affiliation_strings":["Universidade de Brasilia, Brasilia, DF, BR"],"affiliations":[{"raw_affiliation_string":"Universidade de Brasilia, Brasilia, DF, BR","institution_ids":["https://openalex.org/I150729083"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5071276748","display_name":"Maria Em\u00edlia M. T. Walter","orcid":"https://orcid.org/0000-0001-6822-931X"},"institutions":[{"id":"https://openalex.org/I150729083","display_name":"Universidade de Bras\u00edlia","ror":"https://ror.org/02xfp8v59","country_code":"BR","type":"education","lineage":["https://openalex.org/I150729083"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Maria Emilia Walter","raw_affiliation_strings":["Universidade de Brasilia, Brasilia, DF, BR"],"affiliations":[{"raw_affiliation_string":"Universidade de Brasilia, Brasilia, DF, BR","institution_ids":["https://openalex.org/I150729083"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5085416987","display_name":"S\u00e9rgio Lifschitz","orcid":"https://orcid.org/0000-0003-3073-3734"},"institutions":[{"id":"https://openalex.org/I2699952","display_name":"Pontifical Catholic University of Rio de Janeiro","ror":"https://ror.org/01dg47b60","country_code":"BR","type":"education","lineage":["https://openalex.org/I2699952"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Sergio Lifschitz","raw_affiliation_strings":["Pontificia Universidade Catolica do Rio de Janeiro, Rio de Janeiro, RJ, BR"],"affiliations":[{"raw_affiliation_string":"Pontificia Universidade Catolica do Rio de Janeiro, Rio de Janeiro, RJ, BR","institution_ids":["https://openalex.org/I2699952"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":8,"corresponding_author_ids":["https://openalex.org/A5013619525"],"corresponding_institution_ids":["https://openalex.org/I150729083"],"apc_list":null,"apc_paid":null,"fwci":6.4238,"has_fulltext":false,"cited_by_count":29,"citation_normalized_percentile":{"value":0.96470627,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":91,"max":100},"biblio":{"volume":null,"issue":null,"first_page":"1525","last_page":"1531"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},"topics":[{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},{"id":"https://openalex.org/T10715","display_name":"Distributed and Parallel Computing Systems","score":0.9962000250816345,"subfield":{"id":"https://openalex.org/subfields/1705","display_name":"Computer Networks and Communications"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11937","display_name":"Research Data Management Practices","score":0.9815000295639038,"subfield":{"id":"https://openalex.org/subfields/1710","display_name":"Information Systems"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/nosql","display_name":"NoSQL","score":0.9495667219161987},{"id":"https://openalex.org/keywords/workflow","display_name":"Workflow","score":0.8712484836578369},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8210074305534363},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.564761757850647},{"id":"https://openalex.org/keywords/domain","display_name":"Domain (mathematical analysis)","score":0.4506740868091583},{"id":"https://openalex.org/keywords/big-data","display_name":"Big data","score":0.4494025409221649},{"id":"https://openalex.org/keywords/data-modeling","display_name":"Data modeling","score":0.43831413984298706},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.42061981558799744},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.31953656673431396}],"concepts":[{"id":"https://openalex.org/C2779599972","wikidata":"https://www.wikidata.org/wiki/Q82231","display_name":"NoSQL","level":3,"score":0.9495667219161987},{"id":"https://openalex.org/C177212765","wikidata":"https://www.wikidata.org/wiki/Q627335","display_name":"Workflow","level":2,"score":0.8712484836578369},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8210074305534363},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.564761757850647},{"id":"https://openalex.org/C36503486","wikidata":"https://www.wikidata.org/wiki/Q11235244","display_name":"Domain (mathematical analysis)","level":2,"score":0.4506740868091583},{"id":"https://openalex.org/C75684735","wikidata":"https://www.wikidata.org/wiki/Q858810","display_name":"Big data","level":2,"score":0.4494025409221649},{"id":"https://openalex.org/C67186912","wikidata":"https://www.wikidata.org/wiki/Q367664","display_name":"Data modeling","level":2,"score":0.43831413984298706},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.42061981558799744},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.31953656673431396},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/bibm.2015.7359902","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibm.2015.7359902","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2015 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/17","score":0.4399999976158142,"display_name":"Partnerships for the goals"}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":13,"referenced_works":["https://openalex.org/W72884682","https://openalex.org/W118596405","https://openalex.org/W1552694902","https://openalex.org/W1973023914","https://openalex.org/W1994924643","https://openalex.org/W2070791418","https://openalex.org/W2080071958","https://openalex.org/W2081795602","https://openalex.org/W2116529502","https://openalex.org/W2143489492","https://openalex.org/W2533105572","https://openalex.org/W2912046302","https://openalex.org/W6633250042"],"related_works":["https://openalex.org/W2799973158","https://openalex.org/W2419153746","https://openalex.org/W3089119258","https://openalex.org/W2923327995","https://openalex.org/W2518340158","https://openalex.org/W3147331693","https://openalex.org/W349054995","https://openalex.org/W2514636569","https://openalex.org/W2553396476","https://openalex.org/W2519462635"],"abstract_inverted_index":{"This":[0,29],"work":[1],"considers":[2],"a":[3,7,36,75,83,92],"scientific":[4],"experiment":[5],"as":[6],"computational":[8,21],"workflow.":[9],"Provenance":[10],"models":[11],"store":[12],"details":[13,34],"of":[14,35,59,62,65],"each":[15],"workflow":[16,38,71],"execution,":[17,39],"including":[18],"produced":[19],"data,":[20,63],"tools":[22],"parameters":[23],"and":[24,46,102],"their":[25],"versions,":[26],"among":[27,43],"others.":[28],"way,":[30],"scientists":[31],"can":[32],"review":[33],"particular":[37],"compare":[40],"information":[41],"generated":[42,68],"different":[44],"executions":[45],"plan":[47],"new":[48],"ones":[49],"efficiently.":[50],"In":[51,78],"the":[52,57,70],"bioinformatics":[53,90],"domain,":[54],"particularly":[55],"in":[56,91],"presence":[58],"large":[60],"volumes":[61],"persistency":[64],"those":[66],"data":[67,87,99],"during":[69],"execution":[72],"is":[73],"still":[74],"research":[76],"challenge.":[77],"this":[79],"article,":[80],"we":[81],"consider":[82],"study":[84],"on":[85],"provenance":[86],"storage":[88],"for":[89],"document-oriented":[93],"NoSQL":[94],"database":[95],"system.":[96],"We":[97],"present":[98],"modeling":[100],"issues":[101],"discuss":[103],"an":[104],"actual":[105],"implementation":[106],"into":[107],"MongoDB.":[108]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2022,"cited_by_count":17},{"year":2019,"cited_by_count":3},{"year":2018,"cited_by_count":2},{"year":2017,"cited_by_count":3},{"year":2016,"cited_by_count":3}],"updated_date":"2025-11-25T21:42:39.735039","created_date":"2025-10-10T00:00:00"}
