{"id":"https://openalex.org/W2216981159","doi":"https://doi.org/10.1109/bibm.2015.7359810","title":"A prototype for a hybrid system to support systematic review teams: A case study of organ transplantation","display_name":"A prototype for a hybrid system to support systematic review teams: A case study of organ transplantation","publication_year":2015,"publication_date":"2015-11-01","ids":{"openalex":"https://openalex.org/W2216981159","doi":"https://doi.org/10.1109/bibm.2015.7359810","mag":"2216981159","pmid":"https://pubmed.ncbi.nlm.nih.gov/26855824"},"language":"en","primary_location":{"id":"doi:10.1109/bibm.2015.7359810","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibm.2015.7359810","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2015 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)","raw_type":"proceedings-article"},"type":"review","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4742277","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5060479528","display_name":"Tanja Bekhuis","orcid":"https://orcid.org/0000-0002-8537-9077"},"institutions":[{"id":"https://openalex.org/I170201317","display_name":"University of Pittsburgh","ror":"https://ror.org/01an3r305","country_code":"US","type":"education","lineage":["https://openalex.org/I170201317"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Tanja Bekhuis","raw_affiliation_strings":["Department of Biomedical Informatics, School of Medicine, University of Pittsburgh, USA; Department of Dental Public Health, School of Dental Medicine, University of Pittsburgh, USA","Department of Dental Public Health, University of Pittsburgh, USA"],"affiliations":[{"raw_affiliation_string":"Department of Biomedical Informatics, School of Medicine, University of Pittsburgh, USA; Department of Dental Public Health, School of Dental Medicine, University of Pittsburgh, USA","institution_ids":[]},{"raw_affiliation_string":"Department of Dental Public Health, University of Pittsburgh, USA","institution_ids":["https://openalex.org/I170201317"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5012812619","display_name":"Eugene Tseytlin","orcid":null},"institutions":[{"id":"https://openalex.org/I170201317","display_name":"University of Pittsburgh","ror":"https://ror.org/01an3r305","country_code":"US","type":"education","lineage":["https://openalex.org/I170201317"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Eugene Tseytlin","raw_affiliation_strings":["Department of Biomedical Informatics, School of Medicine, University of Pittsburgh, USA","Department of Biomedical Informatics, University of Pittsburgh, USA"],"affiliations":[{"raw_affiliation_string":"Department of Biomedical Informatics, School of Medicine, University of Pittsburgh, USA","institution_ids":["https://openalex.org/I170201317"]},{"raw_affiliation_string":"Department of Biomedical Informatics, University of Pittsburgh, USA","institution_ids":["https://openalex.org/I170201317"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5103228279","display_name":"Kevin J. Mitchell","orcid":"https://orcid.org/0000-0002-1870-5522"},"institutions":[{"id":"https://openalex.org/I170201317","display_name":"University of Pittsburgh","ror":"https://ror.org/01an3r305","country_code":"US","type":"education","lineage":["https://openalex.org/I170201317"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Kevin J. Mitchell","raw_affiliation_strings":["Department of Biomedical Informatics, School of Medicine, University of Pittsburgh, USA","Department of Biomedical Informatics, University of Pittsburgh, USA"],"affiliations":[{"raw_affiliation_string":"Department of Biomedical Informatics, School of Medicine, University of Pittsburgh, USA","institution_ids":["https://openalex.org/I170201317"]},{"raw_affiliation_string":"Department of Biomedical Informatics, University of Pittsburgh, USA","institution_ids":["https://openalex.org/I170201317"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5060479528"],"corresponding_institution_ids":["https://openalex.org/I170201317"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":{"value":0.12679932,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":94},"biblio":{"volume":"160","issue":null,"first_page":"940","last_page":"947"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10582","display_name":"Ethics in Clinical Research","score":0.9883000254631042,"subfield":{"id":"https://openalex.org/subfields/2739","display_name":"Public Health, Environmental and Occupational Health"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T10582","display_name":"Ethics in Clinical Research","score":0.9883000254631042,"subfield":{"id":"https://openalex.org/subfields/2739","display_name":"Public Health, Environmental and Occupational Health"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10206","display_name":"Meta-analysis and systematic reviews","score":0.987500011920929,"subfield":{"id":"https://openalex.org/subfields/1804","display_name":"Statistics, Probability and Uncertainty"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},{"id":"https://openalex.org/T13702","display_name":"Machine Learning in Healthcare","score":0.9864000082015991,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6821853518486023},{"id":"https://openalex.org/keywords/metadata","display_name":"Metadata","score":0.6817031502723694},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.5905543565750122},{"id":"https://openalex.org/keywords/recall","display_name":"Recall","score":0.5104883909225464},{"id":"https://openalex.org/keywords/transplantation","display_name":"Transplantation","score":0.49991512298583984},{"id":"https://openalex.org/keywords/organ-transplantation","display_name":"Organ transplantation","score":0.4886799156665802},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.38830244541168213},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.3844631612300873},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.37645411491394043},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3433883786201477},{"id":"https://openalex.org/keywords/statistics","display_name":"Statistics","score":0.338807612657547},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.3133235573768616},{"id":"https://openalex.org/keywords/surgery","display_name":"Surgery","score":0.15985456109046936},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.15114238858222961},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.14195412397384644},{"id":"https://openalex.org/keywords/psychology","display_name":"Psychology","score":0.11801743507385254},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.08203896880149841}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6821853518486023},{"id":"https://openalex.org/C93518851","wikidata":"https://www.wikidata.org/wiki/Q180160","display_name":"Metadata","level":2,"score":0.6817031502723694},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.5905543565750122},{"id":"https://openalex.org/C100660578","wikidata":"https://www.wikidata.org/wiki/Q18733","display_name":"Recall","level":2,"score":0.5104883909225464},{"id":"https://openalex.org/C2911091166","wikidata":"https://www.wikidata.org/wiki/Q106419912","display_name":"Transplantation","level":2,"score":0.49991512298583984},{"id":"https://openalex.org/C168444539","wikidata":"https://www.wikidata.org/wiki/Q105196","display_name":"Organ transplantation","level":3,"score":0.4886799156665802},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.38830244541168213},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.3844631612300873},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.37645411491394043},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3433883786201477},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.338807612657547},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.3133235573768616},{"id":"https://openalex.org/C141071460","wikidata":"https://www.wikidata.org/wiki/Q40821","display_name":"Surgery","level":1,"score":0.15985456109046936},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.15114238858222961},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.14195412397384644},{"id":"https://openalex.org/C15744967","wikidata":"https://www.wikidata.org/wiki/Q9418","display_name":"Psychology","level":0,"score":0.11801743507385254},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.08203896880149841},{"id":"https://openalex.org/C180747234","wikidata":"https://www.wikidata.org/wiki/Q23373","display_name":"Cognitive psychology","level":1,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1109/bibm.2015.7359810","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibm.2015.7359810","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2015 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)","raw_type":"proceedings-article"},{"id":"pmid:26855824","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/26855824","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings. IEEE International Conference on Bioinformatics and Biomedicine","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:4742277","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4742277","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Proceedings (IEEE Int Conf Bioinformatics Biomed)","raw_type":"Text"}],"best_oa_location":{"id":"pmh:oai:pubmedcentral.nih.gov:4742277","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4742277","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Proceedings (IEEE Int Conf Bioinformatics Biomed)","raw_type":"Text"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320314788","display_name":"Lister Hill National Center for Biomedical Communications","ror":null}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":17,"referenced_works":["https://openalex.org/W118549185","https://openalex.org/W251707070","https://openalex.org/W1546847154","https://openalex.org/W1579771654","https://openalex.org/W1992795012","https://openalex.org/W2028540474","https://openalex.org/W2063198586","https://openalex.org/W2079370125","https://openalex.org/W2099087018","https://openalex.org/W2140336868","https://openalex.org/W2146668368","https://openalex.org/W2147469877","https://openalex.org/W2156517549","https://openalex.org/W2402135405","https://openalex.org/W4313371821","https://openalex.org/W6681046083","https://openalex.org/W6713130573"],"related_works":["https://openalex.org/W2058118494","https://openalex.org/W2392768766","https://openalex.org/W2360419293","https://openalex.org/W4253456829","https://openalex.org/W2241854100","https://openalex.org/W2274125404","https://openalex.org/W2044992177","https://openalex.org/W2795155943","https://openalex.org/W1978003501","https://openalex.org/W2067912714"],"abstract_inverted_index":{"We":[0,130],"describe":[1],"a":[2,5,41,58,85,89],"prototype":[3],"for":[4,34,77],"hybrid":[6],"system":[7,30,82,115],"designed":[8],"to":[9,16,48,103,111,146],"reduce":[10,147],"the":[11,32,36,97,104,112,114,132],"number":[12,98],"of":[13,39,84,99,134,140],"citations":[14,23,40,101],"needed":[15],"re-screen":[17],"(NNRS)":[18],"by":[19,125],"systematic":[20],"reviewers,":[21],"where":[22],"include":[24],"titles,":[25],"abstracts,":[26],"and":[27,72,88,107,142],"metadata.":[28],"The":[29,52,81,93],"obviates":[31],"need":[33],"screening":[35,148],"entire":[37],"set":[38,54],"second":[42],"time,":[43],"which":[44],"is":[45,55],"typically":[46],"done":[47],"control":[49],"human":[50],"error.":[51],"reference":[53],"based":[56],"on":[57],"complex":[59],"review":[60],"about":[61],"organ":[62],"transplantation":[63],"(N=10,796":[64],"citations).":[65],"Data":[66],"were":[67],"split":[68],"into":[69],"50%":[70],"training":[71],"test":[73],"sets,":[74],"randomly":[75],"stratified":[76],"percentage":[78],"eligible":[79],"citations.":[80],"consists":[83],"rule-based":[86],"module":[87,106],"machine-learning":[90],"(ML)":[91],"module.":[92],"former":[94],"substantially":[95],"reduces":[96,116],"negative":[100,143],"passed":[102],"ML":[105],"improves":[108],"imbalance.":[109],"Relative":[110],"baseline,":[113],"classification":[117],"error":[118],"(5.6%":[119],"vs":[120,128],"2.9%)":[121],"thereby":[122],"reducing":[123],"NNRS":[124],"47.3%":[126],"(300":[127],"158).":[129],"discuss":[131],"implications":[133],"de-emphasizing":[135],"sensitivity":[136],"(recall)":[137],"in":[138],"favor":[139],"specificity":[141],"predictive":[144],"value":[145],"burden.":[149]},"counts_by_year":[{"year":2023,"cited_by_count":1}],"updated_date":"2026-04-21T08:09:41.155169","created_date":"2025-10-10T00:00:00"}
