{"id":"https://openalex.org/W1980265904","doi":"https://doi.org/10.1109/bibm.2014.6999277","title":"A novel approach to breast cancer-related disease genes discovered through variation of density modularity","display_name":"A novel approach to breast cancer-related disease genes discovered through variation of density modularity","publication_year":2014,"publication_date":"2014-11-01","ids":{"openalex":"https://openalex.org/W1980265904","doi":"https://doi.org/10.1109/bibm.2014.6999277","mag":"1980265904"},"language":"en","primary_location":{"id":"doi:10.1109/bibm.2014.6999277","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibm.2014.6999277","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2014 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5101496385","display_name":"Xianjun Shen","orcid":"https://orcid.org/0000-0001-5714-8848"},"institutions":[{"id":"https://openalex.org/I40963666","display_name":"Central China Normal University","ror":"https://ror.org/03x1jna21","country_code":"CN","type":"education","lineage":["https://openalex.org/I40963666"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Xianjun Shen","raw_affiliation_strings":["School of Computer, Central China Normal University, Wuhan, China","School of Computer, Central China, Normal University, Wuhan, China"],"affiliations":[{"raw_affiliation_string":"School of Computer, Central China Normal University, Wuhan, China","institution_ids":["https://openalex.org/I40963666"]},{"raw_affiliation_string":"School of Computer, Central China, Normal University, Wuhan, China","institution_ids":["https://openalex.org/I40963666"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101678126","display_name":"Yi Yang","orcid":"https://orcid.org/0000-0002-0958-6648"},"institutions":[{"id":"https://openalex.org/I40963666","display_name":"Central China Normal University","ror":"https://ror.org/03x1jna21","country_code":"CN","type":"education","lineage":["https://openalex.org/I40963666"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yang Yi","raw_affiliation_strings":["School of Computer, Central China Normal University, Wuhan, China","School of Computer, Central China, Normal University, Wuhan, China"],"affiliations":[{"raw_affiliation_string":"School of Computer, Central China Normal University, Wuhan, China","institution_ids":["https://openalex.org/I40963666"]},{"raw_affiliation_string":"School of Computer, Central China, Normal University, Wuhan, China","institution_ids":["https://openalex.org/I40963666"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100322938","display_name":"Yan Wang","orcid":"https://orcid.org/0000-0003-2563-255X"},"institutions":[{"id":"https://openalex.org/I40963666","display_name":"Central China Normal University","ror":"https://ror.org/03x1jna21","country_code":"CN","type":"education","lineage":["https://openalex.org/I40963666"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yan Wang","raw_affiliation_strings":["School of Computer, Central China Normal University, Wuhan, China","School of Computer, Central China, Normal University, Wuhan, China"],"affiliations":[{"raw_affiliation_string":"School of Computer, Central China Normal University, Wuhan, China","institution_ids":["https://openalex.org/I40963666"]},{"raw_affiliation_string":"School of Computer, Central China, Normal University, Wuhan, China","institution_ids":["https://openalex.org/I40963666"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100373745","display_name":"Xiaohong Chen","orcid":"https://orcid.org/0000-0002-9797-8384"},"institutions":[{"id":"https://openalex.org/I40963666","display_name":"Central China Normal University","ror":"https://ror.org/03x1jna21","country_code":"CN","type":"education","lineage":["https://openalex.org/I40963666"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xiaohui Chen","raw_affiliation_strings":["School of Computer, Central China Normal University, Wuhan, China","School of Computer, Central China, Normal University, Wuhan, China"],"affiliations":[{"raw_affiliation_string":"School of Computer, Central China Normal University, Wuhan, China","institution_ids":["https://openalex.org/I40963666"]},{"raw_affiliation_string":"School of Computer, Central China, Normal University, Wuhan, China","institution_ids":["https://openalex.org/I40963666"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5002718976","display_name":"Jincai Yang","orcid":"https://orcid.org/0000-0002-4446-5809"},"institutions":[{"id":"https://openalex.org/I40963666","display_name":"Central China Normal University","ror":"https://ror.org/03x1jna21","country_code":"CN","type":"education","lineage":["https://openalex.org/I40963666"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jincai Yang","raw_affiliation_strings":["School of Computer, Central China Normal University, Wuhan, China","School of Computer, Central China, Normal University, Wuhan, China"],"affiliations":[{"raw_affiliation_string":"School of Computer, Central China Normal University, Wuhan, China","institution_ids":["https://openalex.org/I40963666"]},{"raw_affiliation_string":"School of Computer, Central China, Normal University, Wuhan, China","institution_ids":["https://openalex.org/I40963666"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5102010131","display_name":"Tingting He","orcid":"https://orcid.org/0000-0001-7523-6550"},"institutions":[{"id":"https://openalex.org/I40963666","display_name":"Central China Normal University","ror":"https://ror.org/03x1jna21","country_code":"CN","type":"education","lineage":["https://openalex.org/I40963666"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Tingting He","raw_affiliation_strings":["School of Computer, Central China Normal University, Wuhan, China","School of Computer, Central China, Normal University, Wuhan, China"],"affiliations":[{"raw_affiliation_string":"School of Computer, Central China Normal University, Wuhan, China","institution_ids":["https://openalex.org/I40963666"]},{"raw_affiliation_string":"School of Computer, Central China, Normal University, Wuhan, China","institution_ids":["https://openalex.org/I40963666"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5101496385"],"corresponding_institution_ids":["https://openalex.org/I40963666"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.05610579,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"2","issue":null,"first_page":"22","last_page":"27"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9969000220298767,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9779000282287598,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/breast-cancer","display_name":"Breast cancer","score":0.8077952265739441},{"id":"https://openalex.org/keywords/modularity","display_name":"Modularity (biology)","score":0.7259500026702881},{"id":"https://openalex.org/keywords/disease","display_name":"Disease","score":0.7016154527664185},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5306940078735352},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.5245699882507324},{"id":"https://openalex.org/keywords/cancer","display_name":"Cancer","score":0.5160350799560547},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.3964592218399048},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.3958556056022644},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.2524423599243164},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.1846882402896881},{"id":"https://openalex.org/keywords/pathology","display_name":"Pathology","score":0.07442626357078552}],"concepts":[{"id":"https://openalex.org/C530470458","wikidata":"https://www.wikidata.org/wiki/Q128581","display_name":"Breast cancer","level":3,"score":0.8077952265739441},{"id":"https://openalex.org/C2779478453","wikidata":"https://www.wikidata.org/wiki/Q6889748","display_name":"Modularity (biology)","level":2,"score":0.7259500026702881},{"id":"https://openalex.org/C2779134260","wikidata":"https://www.wikidata.org/wiki/Q12136","display_name":"Disease","level":2,"score":0.7016154527664185},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5306940078735352},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.5245699882507324},{"id":"https://openalex.org/C121608353","wikidata":"https://www.wikidata.org/wiki/Q12078","display_name":"Cancer","level":2,"score":0.5160350799560547},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.3964592218399048},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3958556056022644},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.2524423599243164},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.1846882402896881},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.07442626357078552}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/bibm.2014.6999277","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibm.2014.6999277","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2014 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/3","display_name":"Good health and well-being","score":0.8399999737739563}],"awards":[],"funders":[{"id":"https://openalex.org/F4320321026","display_name":"Ministry of Earth Sciences","ror":"https://ror.org/013cf5k59"},{"id":"https://openalex.org/F4320322186","display_name":"Natural Science Foundation of Hubei Province","ror":null},{"id":"https://openalex.org/F4320322724","display_name":"Ministry of Education, India","ror":"https://ror.org/048xjjh50"},{"id":"https://openalex.org/F4320323173","display_name":"Central China Normal University","ror":"https://ror.org/03x1jna21"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":23,"referenced_works":["https://openalex.org/W1994137276","https://openalex.org/W2023286494","https://openalex.org/W2040847667","https://openalex.org/W2050721857","https://openalex.org/W2082565035","https://openalex.org/W2093830031","https://openalex.org/W2095189226","https://openalex.org/W2095293504","https://openalex.org/W2097771645","https://openalex.org/W2097950642","https://openalex.org/W2109173575","https://openalex.org/W2110705561","https://openalex.org/W2116117181","https://openalex.org/W2124354935","https://openalex.org/W2138679062","https://openalex.org/W2144014661","https://openalex.org/W2147450167","https://openalex.org/W2148502410","https://openalex.org/W2385904695","https://openalex.org/W2914275007","https://openalex.org/W4256087918","https://openalex.org/W6674804648","https://openalex.org/W7049098973"],"related_works":["https://openalex.org/W4391375266","https://openalex.org/W4230687177","https://openalex.org/W1968829728","https://openalex.org/W2349859869","https://openalex.org/W4316651471","https://openalex.org/W3120118008","https://openalex.org/W2051365847","https://openalex.org/W2367249529","https://openalex.org/W2027187261","https://openalex.org/W1972837291"],"abstract_inverted_index":{"Breast":[0],"cancer":[1],"is":[2,18,108],"a":[3,26,65,92,160],"leading":[4],"cause":[5],"of":[6,13,33,43,82,102,142],"cancer-related":[7,15,122,134,152],"deaths":[8],"in":[9,60,163],"women":[10],"worldwide.":[11],"Discovery":[12],"breast":[14,34,121,133,143,151,164],"disease":[16,70,76,123,140,153],"genes":[17,71,77,141,154],"becoming":[19],"very":[20],"important":[21],"to":[22,29,72,119],"researcher":[23],"and":[24,74,116],"opens":[25],"new":[27,52],"way":[28],"investigate":[30],"pathogenic":[31],"mechanism":[32],"cancer.":[35,144,165],"Many":[36],"studies":[37],"have":[38,155],"shown":[39],"that":[40,68,129,137],"the":[41,83,100,112],"availability":[42],"human":[44,84],"genome-wide":[45],"protein-protein":[46],"interactions":[47],"(PPI)":[48],"provides":[49],"us":[50],"with":[51],"opportunity":[53],"for":[54],"discovering":[55],"disease-genes":[56],"by":[57,78],"topological":[58],"features":[59],"PPI":[61,85,114],"network.":[62,86],"Therefore,":[63],"it's":[64],"novel":[66],"idea":[67],"map":[69],"proteins":[73],"predict":[75],"analyzing":[79,146],"modular":[80],"feature":[81],"In":[87],"this":[88],"paper,":[89],"we":[90],"propose":[91],"Closely":[93],"Associated":[94],"Degree":[95],"(CAD)":[96],"algorithm":[97,107],"based":[98],"on":[99,111],"variation":[101],"density":[103],"modularity.":[104],"The":[105,125],"CAD":[106,130],"first":[109],"tested":[110],"yeast":[113],"network,":[115],"then":[117],"applied":[118],"discover":[120],"genes.":[124],"experimental":[126],"results":[127],"show":[128],"gets":[131],"25":[132],"functional":[135,148],"modules":[136],"include":[138],"known":[139],"Further":[145],"these":[147],"modules,":[149],"four":[150],"been":[156],"discovered":[157],"which":[158],"play":[159],"significant":[161],"role":[162]},"counts_by_year":[],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
