{"id":"https://openalex.org/W1983529981","doi":"https://doi.org/10.1109/bibm.2014.6999223","title":"Genetic testing knowledge base (GTKB) towards individualized genetic test recommendation &amp;#x2014; An experimental study","display_name":"Genetic testing knowledge base (GTKB) towards individualized genetic test recommendation &amp;#x2014; An experimental study","publication_year":2014,"publication_date":"2014-11-01","ids":{"openalex":"https://openalex.org/W1983529981","doi":"https://doi.org/10.1109/bibm.2014.6999223","mag":"1983529981"},"language":"en","primary_location":{"id":"doi:10.1109/bibm.2014.6999223","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibm.2014.6999223","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2014 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5073074181","display_name":"Qian Zhu","orcid":"https://orcid.org/0000-0002-4858-6333"},"institutions":[{"id":"https://openalex.org/I79272384","display_name":"University of Maryland, Baltimore County","ror":"https://ror.org/02qskvh78","country_code":"US","type":"education","lineage":["https://openalex.org/I79272384"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Qian Zhu","raw_affiliation_strings":["Department of Information Systems, University of Maryland Baltimore County, Baltimore, MD, USA","Dept. of Information Systems University of Maryland Baltimore County Baltimore, MD, USA#TAB#"],"affiliations":[{"raw_affiliation_string":"Department of Information Systems, University of Maryland Baltimore County, Baltimore, MD, USA","institution_ids":["https://openalex.org/I79272384"]},{"raw_affiliation_string":"Dept. of Information Systems University of Maryland Baltimore County Baltimore, MD, USA#TAB#","institution_ids":["https://openalex.org/I79272384"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101585391","display_name":"Hongfang Liu","orcid":"https://orcid.org/0000-0003-2570-3741"},"institutions":[{"id":"https://openalex.org/I4210146710","display_name":"Mayo Clinic in Florida","ror":"https://ror.org/03zzw1w08","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1330342723","https://openalex.org/I4210146710"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Hongfang Liu","raw_affiliation_strings":["Department of Health Sciences Research Mayo Clinic, Rochester, MN, USA","Department of Health Sciences Research, Mayo Clinic, Rochester, MN USA"],"affiliations":[{"raw_affiliation_string":"Department of Health Sciences Research Mayo Clinic, Rochester, MN, USA","institution_ids":["https://openalex.org/I4210146710"]},{"raw_affiliation_string":"Department of Health Sciences Research, Mayo Clinic, Rochester, MN USA","institution_ids":["https://openalex.org/I4210146710"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5060390916","display_name":"Christopher G. Chute","orcid":"https://orcid.org/0000-0001-5437-2545"},"institutions":[{"id":"https://openalex.org/I4210146710","display_name":"Mayo Clinic in Florida","ror":"https://ror.org/03zzw1w08","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1330342723","https://openalex.org/I4210146710"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Christopher G. Chute","raw_affiliation_strings":["Department of Health Sciences Research Mayo Clinic, Rochester, MN, USA","Department of Health Sciences Research, Mayo Clinic, Rochester, MN USA"],"affiliations":[{"raw_affiliation_string":"Department of Health Sciences Research Mayo Clinic, Rochester, MN, USA","institution_ids":["https://openalex.org/I4210146710"]},{"raw_affiliation_string":"Department of Health Sciences Research, Mayo Clinic, Rochester, MN USA","institution_ids":["https://openalex.org/I4210146710"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5089411154","display_name":"Matthew J. Ferber","orcid":"https://orcid.org/0000-0001-7965-408X"},"institutions":[{"id":"https://openalex.org/I4210125099","display_name":"Mayo Clinic in Arizona","ror":"https://ror.org/03jp40720","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1330342723","https://openalex.org/I4210125099"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Matthew Ferber","raw_affiliation_strings":["Department of Laboratory Medicine, Pathology Mayo Clinic, Rochester, MN, USA","Department of Laboratory Medicine and Pathology, Mayo Clinic, Rochester, MN, USA"],"affiliations":[{"raw_affiliation_string":"Department of Laboratory Medicine, Pathology Mayo Clinic, Rochester, MN, USA","institution_ids":["https://openalex.org/I4210125099"]},{"raw_affiliation_string":"Department of Laboratory Medicine and Pathology, Mayo Clinic, Rochester, MN, USA","institution_ids":["https://openalex.org/I4210125099"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5073074181"],"corresponding_institution_ids":["https://openalex.org/I79272384"],"apc_list":null,"apc_paid":null,"fwci":0.2289,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":{"value":0.63102499,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":94},"biblio":{"volume":"36","issue":null,"first_page":"574","last_page":"577"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10751","display_name":"Forensic and Genetic Research","score":0.9039000272750854,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10751","display_name":"Forensic and Genetic Research","score":0.9039000272750854,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6115278601646423},{"id":"https://openalex.org/keywords/test","display_name":"Test (biology)","score":0.5543118715286255},{"id":"https://openalex.org/keywords/genetic-testing","display_name":"Genetic testing","score":0.536751389503479},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.3526081442832947},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.21999549865722656},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.19297504425048828}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6115278601646423},{"id":"https://openalex.org/C2777267654","wikidata":"https://www.wikidata.org/wiki/Q3519023","display_name":"Test (biology)","level":2,"score":0.5543118715286255},{"id":"https://openalex.org/C2780673598","wikidata":"https://www.wikidata.org/wiki/Q285223","display_name":"Genetic testing","level":2,"score":0.536751389503479},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3526081442832947},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.21999549865722656},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.19297504425048828},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/bibm.2014.6999223","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibm.2014.6999223","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2014 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":14,"referenced_works":["https://openalex.org/W86609720","https://openalex.org/W1921472967","https://openalex.org/W1967244299","https://openalex.org/W2033115336","https://openalex.org/W2056128828","https://openalex.org/W2064337796","https://openalex.org/W2079522949","https://openalex.org/W2107213998","https://openalex.org/W2111437636","https://openalex.org/W2461503629","https://openalex.org/W2576673630","https://openalex.org/W6603505381","https://openalex.org/W6640136120","https://openalex.org/W6732314316"],"related_works":["https://openalex.org/W4391375266","https://openalex.org/W2748952813","https://openalex.org/W2390279801","https://openalex.org/W2358668433","https://openalex.org/W4396701345","https://openalex.org/W2376932109","https://openalex.org/W2001405890","https://openalex.org/W4396696052","https://openalex.org/W4402327032","https://openalex.org/W2382290278"],"abstract_inverted_index":{"The":[0],"gap":[1],"between":[2],"a":[3,11,63,90,156],"large":[4],"growing":[5],"number":[6],"of":[7,15,35,66,183,190],"genetic":[8,30,47,56,67,77,91,104,140,150,157,164],"tests":[9,18,48,68,78],"and":[10,42,137,148,187],"suboptimal":[12],"clinical":[13,21,51,83,111,185],"workflow":[14],"incorporating":[16,191],"these":[17],"into":[19,195],"regular":[20],"practice":[22,52],"poses":[23],"barriers":[24],"to":[25,32,40,45,79,100,131,154,179],"effective":[26],"reliance":[27],"on":[28,82],"advanced":[29],"technologies":[31],"improve":[33],"quality":[34],"healthcare.":[36],"A":[37],"promising":[38],"solution":[39],"encourage":[41],"assist":[43],"physicians":[44],"incorporate":[46],"in":[49,134],"their":[50],"is":[53],"an":[54],"intelligent":[55],"test":[57,105,158,165],"recommendation":[58],"system":[59],"for":[60,126,170],"1)":[61],"providing":[62],"comprehensive":[64],"view":[65],"as":[69,123],"education":[70],"resources;":[71],"2)":[72],"recommending":[73],"the":[74,181,188,196],"most":[75],"appropriate":[76],"patients":[80],"based":[81],"evidence.":[84],"In":[85],"this":[86],"paper,":[87],"we":[88,109],"introduce":[89],"testing":[92,141,151],"knowledge":[93,160],"base,":[94,161],"called":[95],"GTKB,":[96],"which":[97],"was":[98],"designed":[99],"support":[101],"further":[102],"individualized":[103,135],"recommendation.":[106,166],"More":[107],"specifically,":[108],"extracted":[110],"characteristics":[112,186],"identified":[113],"from":[114],"Electronic":[115],"Health":[116],"Records":[117],"(EHRs)":[118],"that":[119],"have":[120],"been":[121,177],"used":[122],"phenotypic":[124],"information":[125],"linked":[127],"archived":[128],"biological":[129],"material":[130],"accelerate":[132],"research":[133],"medicine,":[136],"well-documented":[138],"public":[139],"resources":[142],"including":[143],"Genetic":[144],"Testing":[145],"Registry":[146],"(GTR)":[147],"published":[149],"guidelines":[152],"(GTG)":[153],"construct":[155],"orientated":[159],"ultimately":[162],"supporting":[163],"An":[167],"experimental":[168],"study":[169],"\u201cwilson":[171],"disease":[172],"mutation":[173],"screen":[174],"test\u201d":[175],"has":[176],"conducted":[178],"demonstrate":[180],"identification":[182],"salient":[184],"process":[189],"EHR":[192],"derived":[193],"phenotypes":[194],"GTKB":[197],"construction.":[198]},"counts_by_year":[{"year":2015,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
