{"id":"https://openalex.org/W2060087905","doi":"https://doi.org/10.1109/bibm.2014.6999210","title":"Deep graph search based disease related knowledge summarization from biomedical literature","display_name":"Deep graph search based disease related knowledge summarization from biomedical literature","publication_year":2014,"publication_date":"2014-11-01","ids":{"openalex":"https://openalex.org/W2060087905","doi":"https://doi.org/10.1109/bibm.2014.6999210","mag":"2060087905"},"language":"en","primary_location":{"id":"doi:10.1109/bibm.2014.6999210","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibm.2014.6999210","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2014 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5029375338","display_name":"Xiaofang Wu","orcid":"https://orcid.org/0000-0003-3261-638X"},"institutions":[{"id":"https://openalex.org/I27357992","display_name":"Dalian University of Technology","ror":"https://ror.org/023hj5876","country_code":"CN","type":"education","lineage":["https://openalex.org/I27357992"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Xiaofang Wu","raw_affiliation_strings":["College of Computer Science and Technology, Dalian University of Technology, Dalian, China","College of Computer Science and Technology, Dalian University of Technology, Dalian, China 116024#TAB#"],"affiliations":[{"raw_affiliation_string":"College of Computer Science and Technology, Dalian University of Technology, Dalian, China","institution_ids":["https://openalex.org/I27357992"]},{"raw_affiliation_string":"College of Computer Science and Technology, Dalian University of Technology, Dalian, China 116024#TAB#","institution_ids":["https://openalex.org/I27357992"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5051597671","display_name":"Zhihao Yang","orcid":"https://orcid.org/0000-0001-6186-2024"},"institutions":[{"id":"https://openalex.org/I27357992","display_name":"Dalian University of Technology","ror":"https://ror.org/023hj5876","country_code":"CN","type":"education","lineage":["https://openalex.org/I27357992"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zhihao Yang","raw_affiliation_strings":["College of Computer Science and Technology, Dalian University of Technology, Dalian, China","College of Computer Science and Technology, Dalian University of Technology, Dalian, China 116024#TAB#"],"affiliations":[{"raw_affiliation_string":"College of Computer Science and Technology, Dalian University of Technology, Dalian, China","institution_ids":["https://openalex.org/I27357992"]},{"raw_affiliation_string":"College of Computer Science and Technology, Dalian University of Technology, Dalian, China 116024#TAB#","institution_ids":["https://openalex.org/I27357992"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100765840","display_name":"Zhiheng Li","orcid":"https://orcid.org/0000-0002-5972-4826"},"institutions":[{"id":"https://openalex.org/I27357992","display_name":"Dalian University of Technology","ror":"https://ror.org/023hj5876","country_code":"CN","type":"education","lineage":["https://openalex.org/I27357992"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zhiheng Li","raw_affiliation_strings":["College of Computer Science and Technology, Dalian University of Technology, Dalian, China","College of Computer Science and Technology, Dalian University of Technology, Dalian, China 116024#TAB#"],"affiliations":[{"raw_affiliation_string":"College of Computer Science and Technology, Dalian University of Technology, Dalian, China","institution_ids":["https://openalex.org/I27357992"]},{"raw_affiliation_string":"College of Computer Science and Technology, Dalian University of Technology, Dalian, China 116024#TAB#","institution_ids":["https://openalex.org/I27357992"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101472979","display_name":"Yuanyuan Sun","orcid":"https://orcid.org/0000-0003-2805-5911"},"institutions":[{"id":"https://openalex.org/I27357992","display_name":"Dalian University of Technology","ror":"https://ror.org/023hj5876","country_code":"CN","type":"education","lineage":["https://openalex.org/I27357992"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yuanyuan Sun","raw_affiliation_strings":["College of Computer Science and Technology, Dalian University of Technology, Dalian, China","College of Computer Science and Technology, Dalian University of Technology, Dalian, China 116024#TAB#"],"affiliations":[{"raw_affiliation_string":"College of Computer Science and Technology, Dalian University of Technology, Dalian, China","institution_ids":["https://openalex.org/I27357992"]},{"raw_affiliation_string":"College of Computer Science and Technology, Dalian University of Technology, Dalian, China 116024#TAB#","institution_ids":["https://openalex.org/I27357992"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5023931221","display_name":"Hongfei Lin","orcid":"https://orcid.org/0000-0003-0872-7688"},"institutions":[{"id":"https://openalex.org/I27357992","display_name":"Dalian University of Technology","ror":"https://ror.org/023hj5876","country_code":"CN","type":"education","lineage":["https://openalex.org/I27357992"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Hongfei Lin","raw_affiliation_strings":["College of Computer Science and Technology, Dalian University of Technology, Dalian, China","College of Computer Science and Technology, Dalian University of Technology, Dalian, China 116024#TAB#"],"affiliations":[{"raw_affiliation_string":"College of Computer Science and Technology, Dalian University of Technology, Dalian, China","institution_ids":["https://openalex.org/I27357992"]},{"raw_affiliation_string":"College of Computer Science and Technology, Dalian University of Technology, Dalian, China 116024#TAB#","institution_ids":["https://openalex.org/I27357992"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5100370452","display_name":"Jian Wang","orcid":"https://orcid.org/0000-0002-4656-7446"},"institutions":[{"id":"https://openalex.org/I27357992","display_name":"Dalian University of Technology","ror":"https://ror.org/023hj5876","country_code":"CN","type":"education","lineage":["https://openalex.org/I27357992"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jian Wang","raw_affiliation_strings":["College of Computer Science and Technology, Dalian University of Technology, Dalian, China","College of Computer Science and Technology, Dalian University of Technology, Dalian, China 116024#TAB#"],"affiliations":[{"raw_affiliation_string":"College of Computer Science and Technology, Dalian University of Technology, Dalian, China","institution_ids":["https://openalex.org/I27357992"]},{"raw_affiliation_string":"College of Computer Science and Technology, Dalian University of Technology, Dalian, China 116024#TAB#","institution_ids":["https://openalex.org/I27357992"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5029375338"],"corresponding_institution_ids":["https://openalex.org/I27357992"],"apc_list":null,"apc_paid":null,"fwci":0.1394,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":{"value":0.53406355,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":94},"biblio":{"volume":null,"issue":null,"first_page":"505","last_page":"505"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.995199978351593,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T13083","display_name":"Advanced Text Analysis Techniques","score":0.9767000079154968,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/automatic-summarization","display_name":"Automatic summarization","score":0.9378594160079956},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6906585097312927},{"id":"https://openalex.org/keywords/salient","display_name":"Salient","score":0.6533005833625793},{"id":"https://openalex.org/keywords/precision-and-recall","display_name":"Precision and recall","score":0.5479713082313538},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.520885705947876},{"id":"https://openalex.org/keywords/metric","display_name":"Metric (unit)","score":0.5203697085380554},{"id":"https://openalex.org/keywords/mutual-information","display_name":"Mutual information","score":0.5162720680236816},{"id":"https://openalex.org/keywords/information-extraction","display_name":"Information extraction","score":0.49752309918403625},{"id":"https://openalex.org/keywords/graph","display_name":"Graph","score":0.4667437672615051},{"id":"https://openalex.org/keywords/relationship-extraction","display_name":"Relationship extraction","score":0.45271313190460205},{"id":"https://openalex.org/keywords/construct","display_name":"Construct (python library)","score":0.4230732321739197},{"id":"https://openalex.org/keywords/random-walk","display_name":"Random walk","score":0.41698792576789856},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.36843568086624146},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.33673352003097534},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.19437140226364136},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.18368330597877502}],"concepts":[{"id":"https://openalex.org/C170858558","wikidata":"https://www.wikidata.org/wiki/Q1394144","display_name":"Automatic summarization","level":2,"score":0.9378594160079956},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6906585097312927},{"id":"https://openalex.org/C2780719617","wikidata":"https://www.wikidata.org/wiki/Q1030752","display_name":"Salient","level":2,"score":0.6533005833625793},{"id":"https://openalex.org/C81669768","wikidata":"https://www.wikidata.org/wiki/Q2359161","display_name":"Precision and recall","level":2,"score":0.5479713082313538},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.520885705947876},{"id":"https://openalex.org/C176217482","wikidata":"https://www.wikidata.org/wiki/Q860554","display_name":"Metric (unit)","level":2,"score":0.5203697085380554},{"id":"https://openalex.org/C152139883","wikidata":"https://www.wikidata.org/wiki/Q252973","display_name":"Mutual information","level":2,"score":0.5162720680236816},{"id":"https://openalex.org/C195807954","wikidata":"https://www.wikidata.org/wiki/Q1662562","display_name":"Information extraction","level":2,"score":0.49752309918403625},{"id":"https://openalex.org/C132525143","wikidata":"https://www.wikidata.org/wiki/Q141488","display_name":"Graph","level":2,"score":0.4667437672615051},{"id":"https://openalex.org/C153604712","wikidata":"https://www.wikidata.org/wiki/Q7310755","display_name":"Relationship extraction","level":3,"score":0.45271313190460205},{"id":"https://openalex.org/C2780801425","wikidata":"https://www.wikidata.org/wiki/Q5164392","display_name":"Construct (python library)","level":2,"score":0.4230732321739197},{"id":"https://openalex.org/C121194460","wikidata":"https://www.wikidata.org/wiki/Q856741","display_name":"Random walk","level":2,"score":0.41698792576789856},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.36843568086624146},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.33673352003097534},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.19437140226364136},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.18368330597877502},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C21547014","wikidata":"https://www.wikidata.org/wiki/Q1423657","display_name":"Operations management","level":1,"score":0.0},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/bibm.2014.6999210","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibm.2014.6999210","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2014 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/4","score":0.5099999904632568,"display_name":"Quality Education"}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":4,"referenced_works":["https://openalex.org/W2057793636","https://openalex.org/W2117446654","https://openalex.org/W2139291613","https://openalex.org/W2157632574"],"related_works":["https://openalex.org/W2003578783","https://openalex.org/W842810586","https://openalex.org/W4319940250","https://openalex.org/W2352298027","https://openalex.org/W2092919065","https://openalex.org/W3138801416","https://openalex.org/W4236762297","https://openalex.org/W2444550338","https://openalex.org/W2369351710","https://openalex.org/W2594363579"],"abstract_inverted_index":{"In":[0,17,92],"this":[1,18],"paper,":[2],"we":[3],"present":[4],"an":[5],"approach":[6,71],"to":[7,30,46,59],"automatically":[8],"construct":[9],"disease":[10,32],"related":[11],"knowledge":[12],"summarization":[13],"from":[14],"biomedical":[15,51],"literature.":[16],"approach,":[19],"first":[20,41],"Kullback-Leibler":[21],"divergence":[22],"combined":[23],"with":[24],"mutual":[25],"information":[26,84],"metric":[27],"is":[28,44,57],"used":[29],"extract":[31],"salient":[33,83],"information.":[34],"Then":[35],"deep":[36,97],"search":[37,42,98],"based":[38],"on":[39,82],"depth":[40],"(DFS)":[43],"applied":[45],"find":[47],"hidden":[48,101],"relations":[49,102],"between":[50],"entities.":[52],"Finally":[53],"random":[54],"walk":[55],"algorithm":[56],"exploited":[58],"filter":[60],"out":[61],"the":[62,88,94,104],"weak":[63],"relations.":[64],"The":[65],"experimental":[66],"results":[67],"show":[68],"that":[69],"our":[70],"achieves":[72],"a":[73,78],"precision":[74],"of":[75,80,90,96],"60%":[76],"and":[77,86],"recall":[79],"61%":[81],"extraction,":[85],"outperforms":[87],"method":[89,95],"Combo.":[91],"addition,":[93],"obtains":[99],"more":[100],"than":[103],"original":[105],"correlation":[106],"extraction":[107],"methods.":[108]},"counts_by_year":[{"year":2015,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
