{"id":"https://openalex.org/W1989986772","doi":"https://doi.org/10.1109/bibm.2012.6392672","title":"Classification of multicolor fluorescence in-situ hybridization (M-FISH) image using structure based sparse representation model","display_name":"Classification of multicolor fluorescence in-situ hybridization (M-FISH) image using structure based sparse representation model","publication_year":2012,"publication_date":"2012-10-01","ids":{"openalex":"https://openalex.org/W1989986772","doi":"https://doi.org/10.1109/bibm.2012.6392672","mag":"1989986772"},"language":"en","primary_location":{"id":"doi:10.1109/bibm.2012.6392672","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibm.2012.6392672","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2012 IEEE International Conference on Bioinformatics and Biomedicine","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100739858","display_name":"Jingyao Li","orcid":"https://orcid.org/0000-0001-9080-6929"},"institutions":[{"id":"https://openalex.org/I114832834","display_name":"Tulane University","ror":"https://ror.org/04vmvtb21","country_code":"US","type":"education","lineage":["https://openalex.org/I114832834"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jingyao Li","raw_affiliation_strings":["Department of Biomedical Engineering, Tulane University, New Orleans, LA, USA","Department of Biomedicai Engineering, Tulane University, New Orleans, LA, USA#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biomedical Engineering, Tulane University, New Orleans, LA, USA","institution_ids":["https://openalex.org/I114832834"]},{"raw_affiliation_string":"Department of Biomedicai Engineering, Tulane University, New Orleans, LA, USA#TAB#","institution_ids":["https://openalex.org/I114832834"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5053631725","display_name":"Dongdong Lin","orcid":"https://orcid.org/0000-0002-7228-5397"},"institutions":[{"id":"https://openalex.org/I114832834","display_name":"Tulane University","ror":"https://ror.org/04vmvtb21","country_code":"US","type":"education","lineage":["https://openalex.org/I114832834"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Dongdong Lin","raw_affiliation_strings":["Department of Biomedical Engineering, Tulane University, New Orleans, LA, USA","Department of Biomedicai Engineering, Tulane University, New Orleans, LA, USA#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biomedical Engineering, Tulane University, New Orleans, LA, USA","institution_ids":["https://openalex.org/I114832834"]},{"raw_affiliation_string":"Department of Biomedicai Engineering, Tulane University, New Orleans, LA, USA#TAB#","institution_ids":["https://openalex.org/I114832834"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5079946688","display_name":"Hongbao Cao","orcid":"https://orcid.org/0000-0001-6591-9518"},"institutions":[{"id":"https://openalex.org/I114832834","display_name":"Tulane University","ror":"https://ror.org/04vmvtb21","country_code":"US","type":"education","lineage":["https://openalex.org/I114832834"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Hongbao Cao","raw_affiliation_strings":["Department of Biomedical Engineering, Tulane University, New Orleans, LA, USA","Department of Biomedicai Engineering, Tulane University, New Orleans, LA, USA#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biomedical Engineering, Tulane University, New Orleans, LA, USA","institution_ids":["https://openalex.org/I114832834"]},{"raw_affiliation_string":"Department of Biomedicai Engineering, Tulane University, New Orleans, LA, USA#TAB#","institution_ids":["https://openalex.org/I114832834"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5100339128","display_name":"Yu-Ping Wang","orcid":"https://orcid.org/0000-0003-4129-7704"},"institutions":[{"id":"https://openalex.org/I114832834","display_name":"Tulane University","ror":"https://ror.org/04vmvtb21","country_code":"US","type":"education","lineage":["https://openalex.org/I114832834"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Yu-Ping Wang","raw_affiliation_strings":["Department of Biomedical Engineering, Tulane University, New Orleans, LA, USA","Department of Biomedicai Engineering, Tulane University, New Orleans, LA, USA#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biomedical Engineering, Tulane University, New Orleans, LA, USA","institution_ids":["https://openalex.org/I114832834"]},{"raw_affiliation_string":"Department of Biomedicai Engineering, Tulane University, New Orleans, LA, USA#TAB#","institution_ids":["https://openalex.org/I114832834"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":1.05,"has_fulltext":false,"cited_by_count":5,"citation_normalized_percentile":{"value":0.75615277,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":97},"biblio":{"volume":"53","issue":null,"first_page":"1","last_page":"6"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10500","display_name":"Sparse and Compressive Sensing Techniques","score":0.9987000226974487,"subfield":{"id":"https://openalex.org/subfields/2206","display_name":"Computational Mechanics"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10500","display_name":"Sparse and Compressive Sensing Techniques","score":0.9987000226974487,"subfield":{"id":"https://openalex.org/subfields/2206","display_name":"Computational Mechanics"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10207","display_name":"Advanced biosensing and bioanalysis techniques","score":0.9873999953269958,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11213","display_name":"Genomic variations and chromosomal abnormalities","score":0.9843000173568726,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/pixel","display_name":"Pixel","score":0.7822591066360474},{"id":"https://openalex.org/keywords/sparse-approximation","display_name":"Sparse approximation","score":0.7755999565124512},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.7449226379394531},{"id":"https://openalex.org/keywords/matching-pursuit","display_name":"Matching pursuit","score":0.6757346987724304},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.6657378673553467},{"id":"https://openalex.org/keywords/representation","display_name":"Representation (politics)","score":0.6008844971656799},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5901427268981934},{"id":"https://openalex.org/keywords/image","display_name":"Image (mathematics)","score":0.41988861560821533},{"id":"https://openalex.org/keywords/compressed-sensing","display_name":"Compressed sensing","score":0.30442970991134644}],"concepts":[{"id":"https://openalex.org/C160633673","wikidata":"https://www.wikidata.org/wiki/Q355198","display_name":"Pixel","level":2,"score":0.7822591066360474},{"id":"https://openalex.org/C124066611","wikidata":"https://www.wikidata.org/wiki/Q28684319","display_name":"Sparse approximation","level":2,"score":0.7755999565124512},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.7449226379394531},{"id":"https://openalex.org/C156872377","wikidata":"https://www.wikidata.org/wiki/Q6786281","display_name":"Matching pursuit","level":3,"score":0.6757346987724304},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.6657378673553467},{"id":"https://openalex.org/C2776359362","wikidata":"https://www.wikidata.org/wiki/Q2145286","display_name":"Representation (politics)","level":3,"score":0.6008844971656799},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5901427268981934},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.41988861560821533},{"id":"https://openalex.org/C124851039","wikidata":"https://www.wikidata.org/wiki/Q2665459","display_name":"Compressed sensing","level":2,"score":0.30442970991134644},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.0},{"id":"https://openalex.org/C94625758","wikidata":"https://www.wikidata.org/wiki/Q7163","display_name":"Politics","level":2,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/bibm.2012.6392672","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibm.2012.6392672","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2012 IEEE International Conference on Bioinformatics and Biomedicine","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":25,"referenced_works":["https://openalex.org/W1974774078","https://openalex.org/W1985089773","https://openalex.org/W1993784401","https://openalex.org/W2037479635","https://openalex.org/W2075206831","https://openalex.org/W2075261942","https://openalex.org/W2088859281","https://openalex.org/W2097915756","https://openalex.org/W2098012923","https://openalex.org/W2100518076","https://openalex.org/W2103519107","https://openalex.org/W2105183184","https://openalex.org/W2105454037","https://openalex.org/W2107671342","https://openalex.org/W2126046058","https://openalex.org/W2126842601","https://openalex.org/W2127271355","https://openalex.org/W2129812935","https://openalex.org/W2140356950","https://openalex.org/W2147276092","https://openalex.org/W2151035455","https://openalex.org/W2151693816","https://openalex.org/W2152652881","https://openalex.org/W2162409952","https://openalex.org/W6675536815"],"related_works":["https://openalex.org/W2098521117","https://openalex.org/W2465351041","https://openalex.org/W4385694579","https://openalex.org/W2340242818","https://openalex.org/W4300881421","https://openalex.org/W2103001330","https://openalex.org/W4319793311","https://openalex.org/W2262109992","https://openalex.org/W2241396314","https://openalex.org/W2436826437"],"abstract_inverted_index":{"We":[0,61,107],"developed":[1],"a":[2],"structure":[3,82,157],"based":[4,17,83,158],"sparse":[5,15,84,98,159],"representation":[6,16,85,99,160],"model":[7,19,37,94,100,161],"for":[8,59],"classifying":[9],"chromosomes":[10],"in":[11,21],"M-FISH":[12],"images.":[13],"The":[14,34,87],"classification":[18,88],"used":[20,57],"our":[22,92],"previous":[23,40,97],"work":[24],"only":[25],"considered":[26],"one":[27,41],"pixel":[28,49],"without":[29],"incorporating":[30],"any":[31],"structural":[32],"information.":[33],"new":[35,93],"proposed":[36,130],"extends":[38],"the":[39,70,81,96,102,110,124,127,136,140,147,152,156,165,168],"to":[42,69,79,146,172],"multiple":[43,71],"pixels":[44,54,72],"case,":[45,73],"where":[46],"each":[47],"target":[48],"together":[50],"with":[51,101],"its":[52],"neighboring":[53],"will":[55],"be":[56,133],"simultaneously":[58],"classification.":[60,128],"also":[62,108],"extend":[63],"Orthogonal":[64],"Matching":[65],"Pursuit":[66],"(OMP)":[67],"algorithm":[68,77],"named":[74],"simultaneous":[75],"OMP":[76],"(SOMP),":[78],"solve":[80],"model.":[86],"results":[89],"show":[90],"that":[91,155],"outperforms":[95],"p-value":[103],"less":[104],"than":[105],"le-6.":[106],"discussed":[109],"effects":[111],"of":[112,126,167,175],"several":[113],"parameters":[114],"(neighborhood":[115],"size,":[116],"sparsity":[117,137],"level,":[118],"and":[119,139,178],"training":[120,148],"sample":[121,149],"size)":[122],"on":[123],"accuracy":[125,166],"Our":[129],"method":[131],"can":[132,162],"affected":[134],"by":[135],"level":[138],"neighborhood":[141],"size":[142],"but":[143],"is":[144],"insensitive":[145],"size.":[150],"Therefore,":[151],"comparison":[153],"indicates":[154],"significantly":[163],"improve":[164],"chromosome":[169],"classification,":[170],"leading":[171],"improved":[173],"diagnosis":[174],"genetic":[176],"diseases":[177],"cancers.":[179]},"counts_by_year":[{"year":2018,"cited_by_count":1},{"year":2017,"cited_by_count":1},{"year":2013,"cited_by_count":3}],"updated_date":"2026-06-11T09:08:48.828518","created_date":"2025-10-10T00:00:00"}