{"id":"https://openalex.org/W2171104834","doi":"https://doi.org/10.1109/bibm.2010.5706608","title":"Autoregressive modeling of DNA features for short exon recognition","display_name":"Autoregressive modeling of DNA features for short exon recognition","publication_year":2010,"publication_date":"2010-12-01","ids":{"openalex":"https://openalex.org/W2171104834","doi":"https://doi.org/10.1109/bibm.2010.5706608","mag":"2171104834"},"language":"en","primary_location":{"is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibm.2010.5706608","pdf_url":null,"source":null,"license":null,"version":null,"is_accepted":false,"is_published":false},"type":"article","type_crossref":"proceedings-article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5091774916","display_name":"Nancy Yu Song","orcid":null},"institutions":[{"id":"https://openalex.org/I168719708","display_name":"City University of Hong Kong","ror":"https://ror.org/03q8dnn23","country_code":"HK","type":"education","lineage":["https://openalex.org/I168719708"]}],"countries":["HK"],"is_corresponding":false,"raw_author_name":"Nancy Y. Song","raw_affiliation_string":"Department of Electronic Engineering, City University of Hong Kong, Kowloon, Hong Kong","raw_affiliation_strings":["Department of Electronic Engineering, City University of Hong Kong, Kowloon, Hong Kong"]},{"author_position":"last","author":{"id":"https://openalex.org/A5022154207","display_name":"Hong Yan","orcid":"https://orcid.org/0000-0001-9661-3095"},"institutions":[{"id":"https://openalex.org/I168719708","display_name":"City University of Hong Kong","ror":"https://ror.org/03q8dnn23","country_code":"HK","type":"education","lineage":["https://openalex.org/I168719708"]}],"countries":["HK"],"is_corresponding":false,"raw_author_name":"Hong Yan","raw_affiliation_string":"Department of Electronic Engineering, City University of Hong Kong, Kowloon, Hong Kong","raw_affiliation_strings":["Department of Electronic Engineering, City University of Hong Kong, Kowloon, Hong Kong"]}],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"has_fulltext":true,"fulltext_origin":"ngrams","cited_by_count":3,"cited_by_percentile_year":{"min":79,"max":81},"biblio":{"volume":null,"issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"primary_topic":{"id":"https://openalex.org/T12946","display_name":"Genomic Signal Processing and Analysis Techniques","score":0.9998,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12946","display_name":"Genomic Signal Processing and Analysis Techniques","score":0.9998,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"Ribosome Structure and Translation Mechanisms","score":0.9962,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Prediction of Protein Subcellular Localization","score":0.9943,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"keyword":"dna features","score":0.5863},{"keyword":"recognition","score":0.3877},{"keyword":"autoregressive modeling","score":0.3108}],"concepts":[{"id":"https://openalex.org/C159877910","wikidata":"https://www.wikidata.org/wiki/Q2202883","display_name":"Autoregressive model","level":2,"score":0.75183403},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5735758},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.5211704},{"id":"https://openalex.org/C36823959","wikidata":"https://www.wikidata.org/wiki/Q373027","display_name":"Exon","level":3,"score":0.50594443},{"id":"https://openalex.org/C51679486","wikidata":"https://www.wikidata.org/wiki/Q380546","display_name":"DNA sequencing","level":3,"score":0.4480614},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.43576106},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.43221083},{"id":"https://openalex.org/C2776401178","wikidata":"https://www.wikidata.org/wiki/Q12050496","display_name":"Feature (linguistics)","level":2,"score":0.43070006},{"id":"https://openalex.org/C52622490","wikidata":"https://www.wikidata.org/wiki/Q1026626","display_name":"Feature extraction","level":2,"score":0.41534692},{"id":"https://openalex.org/C552990157","wikidata":"https://www.wikidata.org/wiki/Q7430","display_name":"DNA","level":2,"score":0.35744005},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.24373525},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.18407556},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.14845148},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.12361333},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.11161265},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibm.2010.5706608","pdf_url":null,"source":null,"license":null,"version":null,"is_accepted":false,"is_published":false}],"best_oa_location":null,"sustainable_development_goals":[],"grants":[],"referenced_works_count":15,"referenced_works":["https://openalex.org/W1970019286","https://openalex.org/W1979600864","https://openalex.org/W1997012911","https://openalex.org/W2011092792","https://openalex.org/W2034691490","https://openalex.org/W2041804048","https://openalex.org/W2046824591","https://openalex.org/W2052503008","https://openalex.org/W2080336756","https://openalex.org/W2107578440","https://openalex.org/W2124620276","https://openalex.org/W2135120651","https://openalex.org/W2147367660","https://openalex.org/W2159833474","https://openalex.org/W4245668478"],"related_works":["https://openalex.org/W2352780564","https://openalex.org/W2951456844","https://openalex.org/W70397127","https://openalex.org/W2118812285","https://openalex.org/W2352701899","https://openalex.org/W890495913","https://openalex.org/W1968861569","https://openalex.org/W2582733070","https://openalex.org/W2066044680","https://openalex.org/W2093230554"],"ngrams_url":"https://api.openalex.org/works/W2171104834/ngrams","abstract_inverted_index":{"This":[0],"paper":[1],"presents":[2],"a":[3],"new":[4],"technique":[5],"for":[6,36],"the":[7,20,28,37,44,55,58,67,73,86,91],"detection":[8,107],"of":[9,47,57,75,82],"short":[10],"exons":[11],"in":[12,85,102],"DNA":[13,21,59,76],"sequences.":[14],"In":[15],"this":[16],"method,":[17],"we":[18,53,78],"analyze":[19],"propeller":[22],"twist":[23],"and":[24,61],"bending":[25],"stiffness":[26],"using":[27],"autoregressive":[29],"(AR)":[30],"model.":[31,88],"The":[32],"linear":[33,48],"prediction":[34,49],"matrices":[35],"two":[38],"features":[39],"are":[40],"combined":[41],"to":[42,104],"find":[43],"same":[45],"set":[46],"coefficients,":[50],"from":[51],"which":[52],"estimate":[54],"spectrum":[56],"sequence":[60],"detect":[62],"protein-coding":[63],"regions":[64],"based":[65,98],"on":[66,90],"1/3":[68],"frequency":[69],"component.":[70],"To":[71],"overcome":[72],"non-stationarity":[74],"sequences,":[77],"use":[79],"moving":[80],"windows":[81],"different":[83],"sizes":[84],"AR":[87],"Experiments":[89],"human":[92],"genome":[93],"show":[94],"that":[95],"our":[96],"multi-feature":[97],"method":[99],"is":[100],"superior":[101],"performance":[103],"existing":[105],"exon":[106],"algorithms.":[108]},"cited_by_api_url":"https://api.openalex.org/works?filter=cites:W2171104834","counts_by_year":[{"year":2022,"cited_by_count":1},{"year":2012,"cited_by_count":1}],"updated_date":"2024-02-20T20:28:07.726613","created_date":"2016-06-24"}