{"id":"https://openalex.org/W2168794614","doi":"https://doi.org/10.1109/bibm.2010.5706545","title":"MiRNAs as promising phylogenetic markers for inferring deep metazoan phylogeny and in support of Olfactores hypothesis","display_name":"MiRNAs as promising phylogenetic markers for inferring deep metazoan phylogeny and in support of Olfactores hypothesis","publication_year":2010,"publication_date":"2010-12-01","ids":{"openalex":"https://openalex.org/W2168794614","doi":"https://doi.org/10.1109/bibm.2010.5706545","mag":"2168794614"},"language":"en","primary_location":{"id":"doi:10.1109/bibm.2010.5706545","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibm.2010.5706545","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2010 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5050833679","display_name":"Qingqing Cai","orcid":"https://orcid.org/0000-0001-5447-3282"},"institutions":[{"id":"https://openalex.org/I116953780","display_name":"Tongji University","ror":"https://ror.org/03rc6as71","country_code":"CN","type":"education","lineage":["https://openalex.org/I116953780"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Qingqing Cai","raw_affiliation_strings":["School of Life Sciences and Technology, University of Tongji, Shanghai, China"],"affiliations":[{"raw_affiliation_string":"School of Life Sciences and Technology, University of Tongji, Shanghai, China","institution_ids":["https://openalex.org/I116953780"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100352079","display_name":"Xiaoyan Zhang","orcid":"https://orcid.org/0000-0002-6836-5343"},"institutions":[{"id":"https://openalex.org/I116953780","display_name":"Tongji University","ror":"https://ror.org/03rc6as71","country_code":"CN","type":"education","lineage":["https://openalex.org/I116953780"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xiaoyan Zhang","raw_affiliation_strings":["School of Life Sciences and Technology, University of Tongji, Shanghai, China"],"affiliations":[{"raw_affiliation_string":"School of Life Sciences and Technology, University of Tongji, Shanghai, China","institution_ids":["https://openalex.org/I116953780"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5010121835","display_name":"Zoufeng Li","orcid":null},"institutions":[{"id":"https://openalex.org/I4210162648","display_name":"Shanghai Center For Bioinformation Technology","ror":"https://ror.org/04nyf1f54","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4210162648"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zoufeng Li","raw_affiliation_strings":["Shanghai Center for Bioinformatics Technology, Shanghai, China"],"affiliations":[{"raw_affiliation_string":"Shanghai Center for Bioinformatics Technology, Shanghai, China","institution_ids":["https://openalex.org/I4210162648"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5050833679"],"corresponding_institution_ids":["https://openalex.org/I116953780"],"apc_list":null,"apc_paid":null,"fwci":0.2522,"has_fulltext":false,"cited_by_count":3,"citation_normalized_percentile":{"value":0.65727371,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":95},"biblio":{"volume":null,"issue":null,"first_page":"101","last_page":"104"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12213","display_name":"Marine Ecology and Invasive Species","score":0.9973999857902527,"subfield":{"id":"https://openalex.org/subfields/2306","display_name":"Global and Planetary Change"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T12213","display_name":"Marine Ecology and Invasive Species","score":0.9973999857902527,"subfield":{"id":"https://openalex.org/subfields/2306","display_name":"Global and Planetary Change"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11387","display_name":"Ichthyology and Marine Biology","score":0.9904000163078308,"subfield":{"id":"https://openalex.org/subfields/2309","display_name":"Nature and Landscape Conservation"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9890999794006348,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/phylogenetic-tree","display_name":"Phylogenetic tree","score":0.8374650478363037},{"id":"https://openalex.org/keywords/phylogenetics","display_name":"Phylogenetics","score":0.7932570576667786},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.7339895367622375},{"id":"https://openalex.org/keywords/evolutionary-biology","display_name":"Evolutionary biology","score":0.6188868284225464},{"id":"https://openalex.org/keywords/convergent-evolution","display_name":"Convergent evolution","score":0.60834139585495},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.19992417097091675},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.175031840801239}],"concepts":[{"id":"https://openalex.org/C193252679","wikidata":"https://www.wikidata.org/wiki/Q242125","display_name":"Phylogenetic tree","level":3,"score":0.8374650478363037},{"id":"https://openalex.org/C90132467","wikidata":"https://www.wikidata.org/wiki/Q171184","display_name":"Phylogenetics","level":3,"score":0.7932570576667786},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.7339895367622375},{"id":"https://openalex.org/C78458016","wikidata":"https://www.wikidata.org/wiki/Q840400","display_name":"Evolutionary biology","level":1,"score":0.6188868284225464},{"id":"https://openalex.org/C62142553","wikidata":"https://www.wikidata.org/wiki/Q200312","display_name":"Convergent evolution","level":4,"score":0.60834139585495},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.19992417097091675},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.175031840801239}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/bibm.2010.5706545","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibm.2010.5706545","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2010 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/15","score":0.6800000071525574,"display_name":"Life in Land"}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":38,"referenced_works":["https://openalex.org/W144423133","https://openalex.org/W1489689270","https://openalex.org/W1586941025","https://openalex.org/W1963957860","https://openalex.org/W1972874003","https://openalex.org/W2002640349","https://openalex.org/W2004461361","https://openalex.org/W2004512243","https://openalex.org/W2008133000","https://openalex.org/W2009371644","https://openalex.org/W2020759799","https://openalex.org/W2026570544","https://openalex.org/W2038961923","https://openalex.org/W2040648064","https://openalex.org/W2047271695","https://openalex.org/W2053078446","https://openalex.org/W2076877143","https://openalex.org/W2082928585","https://openalex.org/W2098479948","https://openalex.org/W2108266886","https://openalex.org/W2111211467","https://openalex.org/W2112192177","https://openalex.org/W2116103062","https://openalex.org/W2117688872","https://openalex.org/W2119900532","https://openalex.org/W2131871062","https://openalex.org/W2135740919","https://openalex.org/W2141670298","https://openalex.org/W2146058063","https://openalex.org/W2148168592","https://openalex.org/W2154986131","https://openalex.org/W2158150300","https://openalex.org/W2159957100","https://openalex.org/W2160226189","https://openalex.org/W2160547290","https://openalex.org/W2164314101","https://openalex.org/W2170258388","https://openalex.org/W2913120552"],"related_works":["https://openalex.org/W2174809885","https://openalex.org/W2785148769","https://openalex.org/W2883025420","https://openalex.org/W2124627272","https://openalex.org/W2057191541","https://openalex.org/W2949296710","https://openalex.org/W1992658754","https://openalex.org/W2111939425","https://openalex.org/W2065083790","https://openalex.org/W2518331723"],"abstract_inverted_index":{"The":[0],"Long":[1],"Branch":[2],"attraction":[3],"(LBA)":[4],"artefact":[5],"induced":[6],"by":[7,115],"fast":[8],"evolving":[9],"Urochordata":[10,27],"had":[11,45],"hindered":[12],"the":[13,32,125],"interpretation":[14],"of":[15,20,42,72],"relationships":[16],"among":[17,79],"3":[18],"subphyla":[19],"Chordata.":[21],"Although":[22],"Olfactores":[23,108],"hypothesis":[24,109],"which":[25,106],"placed":[26],"rather":[28],"than":[29],"Cephalochordata":[30],"as":[31,140],"closest":[33],"relatives":[34],"to":[35,46,50,63,85,89,128],"Craniata":[36],"was":[37],"gradually":[38],"accepted,":[39],"every":[40],"step":[41],"phylogenetic":[43,96,142],"reconstruction":[44],"be":[47,86],"treated":[48],"prudential":[49],"minimize":[51],"LBA":[52,91],"phenomenon.":[53,92],"MiRNAs":[54],"(microRNAs)":[55],"are":[56],"well":[57],"known":[58],"for":[59,144],"their":[60],"1)":[61],"adherence":[62],"organism":[64],"development,":[65],"2)":[66],"high":[67],"conservation,":[68],"and":[69,77,102,119,136],"3)":[70],"rarity":[71],"secondary":[73],"loss,":[74],"parallel":[75],"evolution,":[76],"convergence":[78],"metazoan.":[80],"Therefore":[81],"we":[82,137],"suppose":[83],"miRNAs":[84,139],"promising":[87,141],"candidates":[88],"dispel":[90],"We":[93],"performed":[94],"a":[95,111],"study":[97],"upon":[98],"35":[99],"pre-miRNA":[100],"datasets":[101,118],"reconstruct":[103],"Chordata":[104,134],"phylogeny":[105],"supported":[107],"in":[110,132],"more":[112],"toilless":[113],"way":[114],"applying":[116],"fewer":[117],"unspecified":[120],"substitution":[121],"model.":[122],"This":[123],"is":[124],"first":[126],"attempt":[127],"apply":[129],"miRNA":[130],"sequences":[131],"interpreting":[133],"phylogeny,":[135],"reckon":[138],"markers":[143],"illuminating":[145],"deuterostome":[146],"evolution.":[147]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2015,"cited_by_count":1},{"year":2013,"cited_by_count":1}],"updated_date":"2026-03-25T13:04:00.132906","created_date":"2025-10-10T00:00:00"}
