{"id":"https://openalex.org/W4406138479","doi":"https://doi.org/10.1109/bibe63649.2024.10820444","title":"Application of Machine Learning in the Analysis of Gene Expression in Colorectal Cancer Cells Treated With Chemotherapeutics","display_name":"Application of Machine Learning in the Analysis of Gene Expression in Colorectal Cancer Cells Treated With Chemotherapeutics","publication_year":2024,"publication_date":"2024-11-27","ids":{"openalex":"https://openalex.org/W4406138479","doi":"https://doi.org/10.1109/bibe63649.2024.10820444"},"language":"en","primary_location":{"id":"doi:10.1109/bibe63649.2024.10820444","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibe63649.2024.10820444","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2024 IEEE 24th International Conference on Bioinformatics and Bioengineering (BIBE)","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5079535700","display_name":"Jelena Pavi\u0107","orcid":"https://orcid.org/0000-0002-5875-6906"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Jelena Pavi\u0107","raw_affiliation_strings":["Institute for Information Technologies,Bioengineering Laboratory,Kragujevac,Serbia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute for Information Technologies,Bioengineering Laboratory,Kragujevac,Serbia","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5032540995","display_name":"Marko \u017divanovi\u0107","orcid":"https://orcid.org/0000-0002-8833-8035"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Marko \u017divanovi\u0107","raw_affiliation_strings":["Institute for Information Technologies,Bioengineering Laboratory,Kragujevac,Serbia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute for Information Technologies,Bioengineering Laboratory,Kragujevac,Serbia","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5092556821","display_name":"Ognjen Pavi\u0107","orcid":"https://orcid.org/0000-0003-2533-1079"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Ognjen Pavi\u0107","raw_affiliation_strings":["Institute for Information Technologies,Bioengineering Laboratory,Kragujevac,Serbia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute for Information Technologies,Bioengineering Laboratory,Kragujevac,Serbia","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5025638059","display_name":"Katarina Virijevi\u0107","orcid":"https://orcid.org/0000-0003-2703-8829"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Katarina Virijevi\u0107","raw_affiliation_strings":["Institute for Information Technologies,Bioengineering Laboratory,Kragujevac,Serbia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute for Information Technologies,Bioengineering Laboratory,Kragujevac,Serbia","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5093134976","display_name":"Tamara Mladenovi\u0107","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Tamara Mladenovi\u0107","raw_affiliation_strings":["Institute for Information Technologies,Bioengineering Laboratory,Kragujevac,Serbia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute for Information Technologies,Bioengineering Laboratory,Kragujevac,Serbia","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5091690113","display_name":"Irena Tanaskovi\u0107","orcid":"https://orcid.org/0000-0002-1877-3250"},"institutions":[{"id":"https://openalex.org/I14245010","display_name":"University of Kragujevac","ror":"https://ror.org/04f7vj627","country_code":"RS","type":"education","lineage":["https://openalex.org/I14245010"]}],"countries":["RS"],"is_corresponding":false,"raw_author_name":"Irena Tanaskovi\u0107","raw_affiliation_strings":["University of Kragujevac,Faculty of Medical Sciences,Department of Histology and Embryology,Kragujevac,Serbia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Kragujevac,Faculty of Medical Sciences,Department of Histology and Embryology,Kragujevac,Serbia","institution_ids":["https://openalex.org/I14245010"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5006131395","display_name":"Nenad Filipovi\u0107","orcid":"https://orcid.org/0000-0001-9964-5615"},"institutions":[{"id":"https://openalex.org/I14245010","display_name":"University of Kragujevac","ror":"https://ror.org/04f7vj627","country_code":"RS","type":"education","lineage":["https://openalex.org/I14245010"]}],"countries":["RS"],"is_corresponding":false,"raw_author_name":"Nenad Filipovi\u0107","raw_affiliation_strings":["University of Kragujevac, Bioengineering Research and Development Center,Faculty of Engineering,Kragujevac,Serbia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Kragujevac, Bioengineering Research and Development Center,Faculty of Engineering,Kragujevac,Serbia","institution_ids":["https://openalex.org/I14245010"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":7,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.41023342,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"1","last_page":"4"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12422","display_name":"Radiomics and Machine Learning in Medical Imaging","score":0.878000020980835,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T12422","display_name":"Radiomics and Machine Learning in Medical Imaging","score":0.878000020980835,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.8769000172615051,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11067","display_name":"Colorectal Cancer Treatments and Studies","score":0.8210999965667725,"subfield":{"id":"https://openalex.org/subfields/2730","display_name":"Oncology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/colorectal-cancer","display_name":"Colorectal cancer","score":0.7394505143165588},{"id":"https://openalex.org/keywords/cancer","display_name":"Cancer","score":0.5145725607872009},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.45942261815071106},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.4553036093711853},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.4499925673007965},{"id":"https://openalex.org/keywords/cancer-research","display_name":"Cancer research","score":0.42340099811553955},{"id":"https://openalex.org/keywords/oncology","display_name":"Oncology","score":0.3746204376220703},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.30452460050582886},{"id":"https://openalex.org/keywords/internal-medicine","display_name":"Internal medicine","score":0.26568564772605896},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.2056315541267395},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.1086207926273346}],"concepts":[{"id":"https://openalex.org/C526805850","wikidata":"https://www.wikidata.org/wiki/Q188874","display_name":"Colorectal cancer","level":3,"score":0.7394505143165588},{"id":"https://openalex.org/C121608353","wikidata":"https://www.wikidata.org/wiki/Q12078","display_name":"Cancer","level":2,"score":0.5145725607872009},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.45942261815071106},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.4553036093711853},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.4499925673007965},{"id":"https://openalex.org/C502942594","wikidata":"https://www.wikidata.org/wiki/Q3421914","display_name":"Cancer research","level":1,"score":0.42340099811553955},{"id":"https://openalex.org/C143998085","wikidata":"https://www.wikidata.org/wiki/Q162555","display_name":"Oncology","level":1,"score":0.3746204376220703},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.30452460050582886},{"id":"https://openalex.org/C126322002","wikidata":"https://www.wikidata.org/wiki/Q11180","display_name":"Internal medicine","level":1,"score":0.26568564772605896},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.2056315541267395},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.1086207926273346}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/bibe63649.2024.10820444","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibe63649.2024.10820444","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2024 IEEE 24th International Conference on Bioinformatics and Bioengineering (BIBE)","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[{"score":0.6000000238418579,"id":"https://metadata.un.org/sdg/3","display_name":"Good health and well-being"}],"awards":[{"id":"https://openalex.org/G1040033440","display_name":null,"funder_award_id":"451-03-68/2022-14/200378,451-03-68/2022-14/200107","funder_id":"https://openalex.org/F4320322729","funder_display_name":"Ministarstvo Prosvete, Nauke i Tehnolo\u0161kog Razvoja"}],"funders":[{"id":"https://openalex.org/F4320322729","display_name":"Ministarstvo Prosvete, Nauke i Tehnolo\u0161kog Razvoja","ror":"https://ror.org/01znas443"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":17,"referenced_works":["https://openalex.org/W127539000","https://openalex.org/W2043436438","https://openalex.org/W2057507018","https://openalex.org/W2061537785","https://openalex.org/W2094156327","https://openalex.org/W2106000067","https://openalex.org/W2107277218","https://openalex.org/W2114570899","https://openalex.org/W2159538341","https://openalex.org/W2573970795","https://openalex.org/W3178723556","https://openalex.org/W3208267905","https://openalex.org/W4210961478","https://openalex.org/W4395047737","https://openalex.org/W4399788791","https://openalex.org/W4401364104","https://openalex.org/W6717780503"],"related_works":["https://openalex.org/W2374019147","https://openalex.org/W2370262613","https://openalex.org/W4362606997","https://openalex.org/W4361825250","https://openalex.org/W4377092742","https://openalex.org/W2803323662","https://openalex.org/W3032874291","https://openalex.org/W2005057264","https://openalex.org/W2363156284","https://openalex.org/W2415025170"],"abstract_inverted_index":{"Colorectal":[0],"cancer":[1,42,120],"is":[2,14],"a":[3],"leading":[4],"cause":[5],"of":[6,29,128,141],"cancerrelated":[7],"deaths,":[8],"and":[9,36,50,76,91,107,136],"understanding":[10],"its":[11],"molecular":[12],"mechanisms":[13],"key":[15],"to":[16,25,32,96,111],"improving":[17],"treatments.":[18,144],"This":[19,123],"study":[20,124],"applies":[21],"machine":[22,129],"learning":[23,85,130],"algorithms":[24],"analyze":[26,97],"the":[27,126,139],"expression":[28,99,134],"genes":[30,54,77],"related":[31],"redox":[33,58],"balance,":[34],"apoptosis,":[35],"cell":[37,121],"migration":[38],"in":[39,131,138],"HCT-116":[40],"colorectal":[41],"cells":[43],"treated":[44],"with":[45],"chemotherapeutics":[46],"(5fluorouracil,":[47],"oxaliplatin,":[48],"irinotecan,":[49],"leucovorin).":[51],"The":[52],"analyzed":[53],"include":[55],"those":[56],"for":[57],"homeostasis":[59],"(GPX1,":[60],"GPX2,":[61],"GPX3,":[62],"GPX4,":[63],"TXNRD1,":[64],"GSTP1,":[65],"NFE2L2,":[66],"NFKB1,":[67],"HIF1A),":[68],"apoptosis":[69],"(CASP3,":[70],"CASP8,":[71],"CASP9,":[72],"FAS,":[73],"BCL-2,":[74],"BAX),":[75],"coding":[78],"cytoskeleton":[79],"proteins":[80],"(CDH1,":[81],"CTNNB1,":[82],"CDH2).":[83],"Machine":[84],"models,":[86],"such":[87],"as":[88],"decision":[89],"trees":[90],"random":[92],"forests":[93],"were":[94,109],"used":[95],"gene":[98,133],"changes":[100],"based":[101],"on":[102,119],"qPCR":[103],"data.":[104],"Notably,":[105],"GPX4":[106],"BAX":[108],"linked":[110],"chemoresistance,":[112],"while":[113],"CDH1":[114],"upregulation":[115],"suggested":[116],"an":[117],"effect":[118],"migration.":[122],"demonstrates":[125],"potential":[127],"identifying":[132],"patterns":[135],"aiding":[137],"development":[140],"personalized":[142],"CRC":[143]},"counts_by_year":[],"updated_date":"2026-06-11T09:08:48.828518","created_date":"2025-10-10T00:00:00"}
