{"id":"https://openalex.org/W1970110893","doi":"https://doi.org/10.1109/bibe.2013.6701650","title":"Some results on topological colored motifs in metabolic networks","display_name":"Some results on topological colored motifs in metabolic networks","publication_year":2013,"publication_date":"2013-11-01","ids":{"openalex":"https://openalex.org/W1970110893","doi":"https://doi.org/10.1109/bibe.2013.6701650","mag":"1970110893"},"language":"en","primary_location":{"id":"doi:10.1109/bibe.2013.6701650","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibe.2013.6701650","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"13th IEEE International Conference on BioInformatics and BioEngineering","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5073102002","display_name":"El\u00f3i Ara\u00fajo","orcid":"https://orcid.org/0000-0002-8015-6237"},"institutions":[{"id":"https://openalex.org/I122558511","display_name":"Universidade Federal de Mato Grosso do Sul","ror":"https://ror.org/0366d2847","country_code":"BR","type":"education","lineage":["https://openalex.org/I122558511"]},{"id":"https://openalex.org/I2802295813","display_name":"Universidade Estadual de Mato Grosso do Sul","ror":"https://ror.org/02ggt9460","country_code":"BR","type":"education","lineage":["https://openalex.org/I2802295813"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Eloi Araujo","raw_affiliation_strings":["Faculdade de Computa\u00e7\u00e3o, Universidade Federal de Mato Grosso do Sul, Brazil","Fac. de Comput., Univ. Fed. de Mato Grosso do Sul, Dourados, Brazil"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Faculdade de Computa\u00e7\u00e3o, Universidade Federal de Mato Grosso do Sul, Brazil","institution_ids":["https://openalex.org/I122558511"]},{"raw_affiliation_string":"Fac. de Comput., Univ. Fed. de Mato Grosso do Sul, Dourados, Brazil","institution_ids":["https://openalex.org/I2802295813"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5044775293","display_name":"Marco A. Stefanes","orcid":"https://orcid.org/0000-0002-7155-6597"},"institutions":[{"id":"https://openalex.org/I122558511","display_name":"Universidade Federal de Mato Grosso do Sul","ror":"https://ror.org/0366d2847","country_code":"BR","type":"education","lineage":["https://openalex.org/I122558511"]},{"id":"https://openalex.org/I2802295813","display_name":"Universidade Estadual de Mato Grosso do Sul","ror":"https://ror.org/02ggt9460","country_code":"BR","type":"education","lineage":["https://openalex.org/I2802295813"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Marco A. Stefanes","raw_affiliation_strings":["Faculdade de Computa\u00e7\u00e3o, Universidade Federal de Mato Grosso do Sul, Brazil","Fac. de Comput., Univ. Fed. de Mato Grosso do Sul, Dourados, Brazil"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Faculdade de Computa\u00e7\u00e3o, Universidade Federal de Mato Grosso do Sul, Brazil","institution_ids":["https://openalex.org/I122558511"]},{"raw_affiliation_string":"Fac. de Comput., Univ. Fed. de Mato Grosso do Sul, Dourados, Brazil","institution_ids":["https://openalex.org/I2802295813"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.1496,"has_fulltext":false,"cited_by_count":3,"citation_normalized_percentile":{"value":0.5544835,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":96},"biblio":{"volume":"174","issue":null,"first_page":"1","last_page":"5"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":0.9907000064849854,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":0.9907000064849854,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10374","display_name":"Advanced Graph Theory Research","score":0.9717000126838684,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9646999835968018,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/motif","display_name":"Motif (music)","score":0.8605642914772034},{"id":"https://openalex.org/keywords/colored","display_name":"Colored","score":0.8163360357284546},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5548374652862549},{"id":"https://openalex.org/keywords/structural-motif","display_name":"Structural motif","score":0.49858522415161133},{"id":"https://openalex.org/keywords/tree","display_name":"Tree (set theory)","score":0.44602692127227783},{"id":"https://openalex.org/keywords/network-motif","display_name":"Network motif","score":0.4115484654903412},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.4105533957481384},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.3726081848144531},{"id":"https://openalex.org/keywords/topology","display_name":"Topology (electrical circuits)","score":0.36930686235427856},{"id":"https://openalex.org/keywords/complex-network","display_name":"Complex network","score":0.26893675327301025},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.2468239963054657},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.23114681243896484},{"id":"https://openalex.org/keywords/combinatorics","display_name":"Combinatorics","score":0.14747947454452515},{"id":"https://openalex.org/keywords/physics","display_name":"Physics","score":0.07387879490852356}],"concepts":[{"id":"https://openalex.org/C32276052","wikidata":"https://www.wikidata.org/wiki/Q908349","display_name":"Motif (music)","level":2,"score":0.8605642914772034},{"id":"https://openalex.org/C2778307483","wikidata":"https://www.wikidata.org/wiki/Q5149038","display_name":"Colored","level":2,"score":0.8163360357284546},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5548374652862549},{"id":"https://openalex.org/C132677234","wikidata":"https://www.wikidata.org/wiki/Q3273544","display_name":"Structural motif","level":2,"score":0.49858522415161133},{"id":"https://openalex.org/C113174947","wikidata":"https://www.wikidata.org/wiki/Q2859736","display_name":"Tree (set theory)","level":2,"score":0.44602692127227783},{"id":"https://openalex.org/C60723933","wikidata":"https://www.wikidata.org/wiki/Q7001080","display_name":"Network motif","level":3,"score":0.4115484654903412},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.4105533957481384},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3726081848144531},{"id":"https://openalex.org/C184720557","wikidata":"https://www.wikidata.org/wiki/Q7825049","display_name":"Topology (electrical circuits)","level":2,"score":0.36930686235427856},{"id":"https://openalex.org/C34947359","wikidata":"https://www.wikidata.org/wiki/Q665189","display_name":"Complex network","level":2,"score":0.26893675327301025},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.2468239963054657},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.23114681243896484},{"id":"https://openalex.org/C114614502","wikidata":"https://www.wikidata.org/wiki/Q76592","display_name":"Combinatorics","level":1,"score":0.14747947454452515},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.07387879490852356},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C159985019","wikidata":"https://www.wikidata.org/wiki/Q181790","display_name":"Composite material","level":1,"score":0.0},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.0},{"id":"https://openalex.org/C192562407","wikidata":"https://www.wikidata.org/wiki/Q228736","display_name":"Materials science","level":0,"score":0.0},{"id":"https://openalex.org/C24890656","wikidata":"https://www.wikidata.org/wiki/Q82811","display_name":"Acoustics","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/bibe.2013.6701650","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibe.2013.6701650","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"13th IEEE International Conference on BioInformatics and BioEngineering","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":19,"referenced_works":["https://openalex.org/W1561121869","https://openalex.org/W1565474750","https://openalex.org/W1573571013","https://openalex.org/W1602427246","https://openalex.org/W1857509987","https://openalex.org/W2028843648","https://openalex.org/W2029029999","https://openalex.org/W2040176884","https://openalex.org/W2078542889","https://openalex.org/W2095075515","https://openalex.org/W2139343285","https://openalex.org/W2152084501","https://openalex.org/W2153020710","https://openalex.org/W2561728979","https://openalex.org/W2620985142","https://openalex.org/W2763029945","https://openalex.org/W3104156214","https://openalex.org/W6634006353","https://openalex.org/W6739286794"],"related_works":["https://openalex.org/W3079957389","https://openalex.org/W4205962317","https://openalex.org/W2368410102","https://openalex.org/W4400799920","https://openalex.org/W3021477453","https://openalex.org/W2364249514","https://openalex.org/W2938754949","https://openalex.org/W2610941444","https://openalex.org/W2132757463","https://openalex.org/W4288366168"],"abstract_inverted_index":{"In":[0],"this":[1,36],"work,":[2],"we":[3,42,51],"address":[4],"the":[5,25,28,53,58,62],"topological":[6],"colored":[7],"motif":[8,63],"search":[9],"problem":[10,15,37],"in":[11,19,60,83],"metabolic":[12,85],"networks.":[13],"This":[14],"is":[16,64],"a":[17,65,71,84],"concern":[18],"biology,":[20],"which":[21,61],"seeks":[22],"to":[23],"describe":[24,52],"functions":[26],"and":[27],"evolution":[29],"of":[30,35,78,81],"metabolism.":[31],"Recently,":[32],"several":[33],"variations":[34],"have":[38],"been":[39],"studied.":[40],"Here,":[41],"present":[43],"some":[44],"hardness":[45],"results":[46],"for":[47,57],"finding":[48,76],"motifs.":[49],"Furthermore,":[50],"first":[54],"polynomial":[55],"algorithm":[56],"case":[59],"colorful":[66],"tree.":[67],"We":[68],"also":[69],"detail":[70],"data":[72],"structure":[73],"that":[74],"allows":[75],"all":[77],"these":[79],"types":[80],"motifs":[82],"network.":[86]},"counts_by_year":[{"year":2020,"cited_by_count":2},{"year":2015,"cited_by_count":1}],"updated_date":"2026-06-11T09:08:48.828518","created_date":"2025-10-10T00:00:00"}