{"id":"https://openalex.org/W2091517923","doi":"https://doi.org/10.1109/bibe.2008.4696774","title":"Flexible data integration and ontology-based data access to medical records","display_name":"Flexible data integration and ontology-based data access to medical records","publication_year":2008,"publication_date":"2008-10-01","ids":{"openalex":"https://openalex.org/W2091517923","doi":"https://doi.org/10.1109/bibe.2008.4696774","mag":"2091517923"},"language":"en","primary_location":{"id":"doi:10.1109/bibe.2008.4696774","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibe.2008.4696774","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2008 8th IEEE International Conference on BioInformatics and BioEngineering","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5032323128","display_name":"Lucas Zamboulis","orcid":null},"institutions":[{"id":"https://openalex.org/I124357947","display_name":"University of London","ror":"https://ror.org/04cw6st05","country_code":"GB","type":"education","lineage":["https://openalex.org/I124357947"]},{"id":"https://openalex.org/I98259816","display_name":"Birkbeck, University of London","ror":"https://ror.org/02mb95055","country_code":"GB","type":"education","lineage":["https://openalex.org/I124357947","https://openalex.org/I98259816"]}],"countries":["GB"],"is_corresponding":true,"raw_author_name":"Lucas Zamboulis","raw_affiliation_strings":["School of Computer Science and Information Systems, Birkbeck, University of London, London, UK","Sch. of Comput. Sci. & Inf. Syst., Univ. of London, London"],"affiliations":[{"raw_affiliation_string":"School of Computer Science and Information Systems, Birkbeck, University of London, London, UK","institution_ids":["https://openalex.org/I98259816"]},{"raw_affiliation_string":"Sch. of Comput. Sci. & Inf. Syst., Univ. of London, London","institution_ids":["https://openalex.org/I124357947"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5051400056","display_name":"Alexandra Poulovassilis","orcid":"https://orcid.org/0000-0001-8981-4104"},"institutions":[{"id":"https://openalex.org/I98259816","display_name":"Birkbeck, University of London","ror":"https://ror.org/02mb95055","country_code":"GB","type":"education","lineage":["https://openalex.org/I124357947","https://openalex.org/I98259816"]},{"id":"https://openalex.org/I124357947","display_name":"University of London","ror":"https://ror.org/04cw6st05","country_code":"GB","type":"education","lineage":["https://openalex.org/I124357947"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Alexandra Poulovassilis","raw_affiliation_strings":["School of Computer Science and Information Systems, Birkbeck, University of London, London, UK","Sch. of Comput. Sci. & Inf. Syst., Univ. of London, London"],"affiliations":[{"raw_affiliation_string":"School of Computer Science and Information Systems, Birkbeck, University of London, London, UK","institution_ids":["https://openalex.org/I98259816"]},{"raw_affiliation_string":"Sch. of Comput. Sci. & Inf. Syst., Univ. of London, London","institution_ids":["https://openalex.org/I124357947"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5008545219","display_name":"George Roussos","orcid":"https://orcid.org/0000-0002-7665-7303"},"institutions":[{"id":"https://openalex.org/I124357947","display_name":"University of London","ror":"https://ror.org/04cw6st05","country_code":"GB","type":"education","lineage":["https://openalex.org/I124357947"]},{"id":"https://openalex.org/I98259816","display_name":"Birkbeck, University of London","ror":"https://ror.org/02mb95055","country_code":"GB","type":"education","lineage":["https://openalex.org/I124357947","https://openalex.org/I98259816"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"George Roussos","raw_affiliation_strings":["School of Computer Science and Information Systems, Birkbeck, University of London, London, UK","Sch. of Comput. Sci. & Inf. Syst., Univ. of London, London"],"affiliations":[{"raw_affiliation_string":"School of Computer Science and Information Systems, Birkbeck, University of London, London, UK","institution_ids":["https://openalex.org/I98259816"]},{"raw_affiliation_string":"Sch. of Comput. Sci. & Inf. Syst., Univ. of London, London","institution_ids":["https://openalex.org/I124357947"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5032323128"],"corresponding_institution_ids":["https://openalex.org/I124357947","https://openalex.org/I98259816"],"apc_list":null,"apc_paid":null,"fwci":0.1383,"has_fulltext":false,"cited_by_count":5,"citation_normalized_percentile":{"value":0.55695956,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":94},"biblio":{"volume":"10","issue":null,"first_page":"1","last_page":"6"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9957000017166138,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9957000017166138,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10215","display_name":"Semantic Web and Ontologies","score":0.991100013256073,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11719","display_name":"Data Quality and Management","score":0.9799000024795532,"subfield":{"id":"https://openalex.org/subfields/1803","display_name":"Management Science and Operations Research"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7701806426048279},{"id":"https://openalex.org/keywords/ontology","display_name":"Ontology","score":0.7454320192337036},{"id":"https://openalex.org/keywords/domain","display_name":"Domain (mathematical analysis)","score":0.5480029582977295},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.5416705012321472},{"id":"https://openalex.org/keywords/data-integration","display_name":"Data integration","score":0.5379489064216614},{"id":"https://openalex.org/keywords/ontology-based-data-integration","display_name":"Ontology-based data integration","score":0.5302823185920715},{"id":"https://openalex.org/keywords/resource","display_name":"Resource (disambiguation)","score":0.5260940790176392},{"id":"https://openalex.org/keywords/relational-database","display_name":"Relational database","score":0.46873387694358826},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.41515329480171204},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.3455776870250702},{"id":"https://openalex.org/keywords/knowledge-management","display_name":"Knowledge management","score":0.28681138157844543},{"id":"https://openalex.org/keywords/domain-knowledge","display_name":"Domain knowledge","score":0.28649336099624634}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7701806426048279},{"id":"https://openalex.org/C25810664","wikidata":"https://www.wikidata.org/wiki/Q44325","display_name":"Ontology","level":2,"score":0.7454320192337036},{"id":"https://openalex.org/C36503486","wikidata":"https://www.wikidata.org/wiki/Q11235244","display_name":"Domain (mathematical analysis)","level":2,"score":0.5480029582977295},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.5416705012321472},{"id":"https://openalex.org/C72634772","wikidata":"https://www.wikidata.org/wiki/Q386824","display_name":"Data integration","level":2,"score":0.5379489064216614},{"id":"https://openalex.org/C22550185","wikidata":"https://www.wikidata.org/wiki/Q7095047","display_name":"Ontology-based data integration","level":3,"score":0.5302823185920715},{"id":"https://openalex.org/C206345919","wikidata":"https://www.wikidata.org/wiki/Q20380951","display_name":"Resource (disambiguation)","level":2,"score":0.5260940790176392},{"id":"https://openalex.org/C5655090","wikidata":"https://www.wikidata.org/wiki/Q192588","display_name":"Relational database","level":2,"score":0.46873387694358826},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.41515329480171204},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.3455776870250702},{"id":"https://openalex.org/C56739046","wikidata":"https://www.wikidata.org/wiki/Q192060","display_name":"Knowledge management","level":1,"score":0.28681138157844543},{"id":"https://openalex.org/C207685749","wikidata":"https://www.wikidata.org/wiki/Q2088941","display_name":"Domain knowledge","level":2,"score":0.28649336099624634},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0},{"id":"https://openalex.org/C31258907","wikidata":"https://www.wikidata.org/wiki/Q1301371","display_name":"Computer network","level":1,"score":0.0},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1109/bibe.2008.4696774","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibe.2008.4696774","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2008 8th IEEE International Conference on BioInformatics and BioEngineering","raw_type":"proceedings-article"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.144.5120","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.144.5120","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://www.dcs.bbk.ac.uk/~lucas/pubs/papers/ZPR08.pdf","raw_type":"text"},{"id":"pmh:oai:eprints.bbk.ac.uk.oai2:7905","is_oa":false,"landing_page_url":"https://eprints.bbk.ac.uk/id/eprint/7905/","pdf_url":null,"source":{"id":"https://openalex.org/S4306400466","display_name":"BIROn (Birkbeck, University of London)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I98259816","host_organization_name":"Birkbeck, University of London","host_organization_lineage":["https://openalex.org/I98259816"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Book Section"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320337093","display_name":"Birkbeck, University of London","ror":"https://ror.org/02mb95055"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":30,"referenced_works":["https://openalex.org/W62327733","https://openalex.org/W1482134990","https://openalex.org/W1484663751","https://openalex.org/W1512622253","https://openalex.org/W1512883626","https://openalex.org/W1515036872","https://openalex.org/W1529281301","https://openalex.org/W1534402964","https://openalex.org/W1548527202","https://openalex.org/W1573762225","https://openalex.org/W1578493176","https://openalex.org/W1589711745","https://openalex.org/W1591768831","https://openalex.org/W1598647194","https://openalex.org/W1624976387","https://openalex.org/W1767872581","https://openalex.org/W1770983685","https://openalex.org/W1791430325","https://openalex.org/W2119647569","https://openalex.org/W2126703991","https://openalex.org/W2127113936","https://openalex.org/W2155419928","https://openalex.org/W2156892696","https://openalex.org/W2159585060","https://openalex.org/W2160948978","https://openalex.org/W2339920159","https://openalex.org/W4235498869","https://openalex.org/W6602532367","https://openalex.org/W6629040674","https://openalex.org/W6683371330"],"related_works":["https://openalex.org/W2284058717","https://openalex.org/W2159818280","https://openalex.org/W2114954739","https://openalex.org/W2140329110","https://openalex.org/W1794266373","https://openalex.org/W2889792096","https://openalex.org/W1506177826","https://openalex.org/W1830516355","https://openalex.org/W2158851296","https://openalex.org/W4251889114"],"abstract_inverted_index":{"The":[0,27],"ASSIST":[1,30,87,100],"project":[2],"aims":[3],"to":[4,32,53,67,134,183],"facilitate":[5],"cervical":[6,77],"cancer":[7],"research":[8],"by":[9],"integrating":[10,135],"medical":[11,23,37,51,88,137],"records":[12],"containing":[13],"both":[14,180],"phenotypic":[15],"and":[16,19,39,103,112,145,170,177],"genotypic":[17],"data,":[18],"residing":[20],"in":[21,45,97,104,163],"different":[22],"centres":[24],"or":[25],"hospitals.":[26],"goal":[28],"of":[29,36,42,65,75,85,156],"is":[31,153],"enable":[33],"the":[34,40,63,82,86,94,99,113,117,154,167,171],"evaluation":[35],"hypotheses":[38],"conduct":[41],"association":[43],"studies":[44],"an":[46,141,158],"intuitive":[47],"manner,":[48],"thereby":[49],"allowing":[50],"researchers":[52],"identify":[54,68],"risk":[55,74],"factors":[56],"that":[57],"can":[58],"then":[59],"be":[60],"used":[61],"at":[62,72],"point":[64],"care":[66],"women":[69],"who":[70],"are":[71,174,178],"high":[73],"developing":[76],"cancer.":[78],"This":[79],"paper":[80],"presents":[81],"current":[83],"status":[84],"knowledgebase.":[89],"In":[90],"particular,":[91],"we":[92],"discuss":[93],"challenges":[95],"faced":[96],"constructing":[98],"integrated":[101,161],"resource":[102,162],"enabling":[105],"query":[106,148],"processing":[107],"through":[108],"a":[109,164],"domain":[110,143,172],"ontology,":[111],"solutions":[114],"provided":[115],"using":[116],"AutoMed":[118],"heterogeneous":[119],"data":[120,126,130,138,168],"integration":[121,131],"system.":[122],"We":[123],"focus":[124],"on":[125,129,147],"cleansing":[127],"issues,":[128],"issues":[132],"related":[133],"relational":[136],"sources":[139,169],"into":[140],"independent":[142],"ontology":[144,173],"also":[146],"processing.":[149],"Of":[150],"particular":[151],"interest":[152],"challenge":[155],"providing":[157],"easily":[159],"maintainable":[160],"setting":[165],"where":[166],"developed":[175],"independently":[176],"therefore":[179],"highly":[181],"likely":[182],"evolve":[184],"over":[185],"time.":[186]},"counts_by_year":[{"year":2020,"cited_by_count":1},{"year":2017,"cited_by_count":1},{"year":2015,"cited_by_count":1},{"year":2014,"cited_by_count":1}],"updated_date":"2026-04-05T17:49:38.594831","created_date":"2025-10-10T00:00:00"}
