{"id":"https://openalex.org/W2093554999","doi":"https://doi.org/10.1109/bibe.2007.4375739","title":"Graph and Topological Structure Mining on Scientific Articles","display_name":"Graph and Topological Structure Mining on Scientific Articles","publication_year":2007,"publication_date":"2007-10-01","ids":{"openalex":"https://openalex.org/W2093554999","doi":"https://doi.org/10.1109/bibe.2007.4375739","mag":"2093554999"},"language":"en","primary_location":{"id":"doi:10.1109/bibe.2007.4375739","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibe.2007.4375739","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2007 IEEE 7th International Symposium on BioInformatics and BioEngineering","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100380497","display_name":"Fan Wang","orcid":"https://orcid.org/0000-0001-9851-6029"},"institutions":[{"id":"https://openalex.org/I52357470","display_name":"The Ohio State University","ror":"https://ror.org/00rs6vg23","country_code":"US","type":"education","lineage":["https://openalex.org/I52357470"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Fan Wang","raw_affiliation_strings":["Department of Computer Science and Engineering, Ohio State Uinversity, Columbus, OH, USA","Ohio State Univ., Columbus#TAB#"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, Ohio State Uinversity, Columbus, OH, USA","institution_ids":["https://openalex.org/I52357470"]},{"raw_affiliation_string":"Ohio State Univ., Columbus#TAB#","institution_ids":["https://openalex.org/I52357470"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5103270436","display_name":"Ruoming Jin","orcid":"https://orcid.org/0000-0003-1895-4243"},"institutions":[{"id":"https://openalex.org/I149910238","display_name":"Kent State University","ror":"https://ror.org/049pfb863","country_code":"US","type":"education","lineage":["https://openalex.org/I149910238"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Ruoming Jin","raw_affiliation_strings":["Department of Computer Science, Kent University, Kent, OH, USA","Department of Computer Science, Kent State University, Kent OH 44242. jin@cs.kent.edu"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Kent University, Kent, OH, USA","institution_ids":["https://openalex.org/I149910238"]},{"raw_affiliation_string":"Department of Computer Science, Kent State University, Kent OH 44242. jin@cs.kent.edu","institution_ids":["https://openalex.org/I149910238"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5014913714","display_name":"Gagan Agrawal","orcid":"https://orcid.org/0000-0002-2609-1428"},"institutions":[{"id":"https://openalex.org/I52357470","display_name":"The Ohio State University","ror":"https://ror.org/00rs6vg23","country_code":"US","type":"education","lineage":["https://openalex.org/I52357470"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Gagan Agrawal","raw_affiliation_strings":["Department of Computer Science and Engineering, Ohio State Uinversity, Columbus, OH, USA","Department of Computer Science and Engineering, Ohio State University, Columbus OH 43210. agrawal@cse.ohio-state.edu"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, Ohio State Uinversity, Columbus, OH, USA","institution_ids":["https://openalex.org/I52357470"]},{"raw_affiliation_string":"Department of Computer Science and Engineering, Ohio State University, Columbus OH 43210. agrawal@cse.ohio-state.edu","institution_ids":["https://openalex.org/I52357470"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5047026792","display_name":"Helen Piontkivska","orcid":"https://orcid.org/0000-0003-1844-864X"},"institutions":[{"id":"https://openalex.org/I149910238","display_name":"Kent State University","ror":"https://ror.org/049pfb863","country_code":"US","type":"education","lineage":["https://openalex.org/I149910238"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Helen Piontkivska","raw_affiliation_strings":["Department of Biological Sciences, Kent University, Kent, OH, USA","Department of Biological Sciences, Kent State University, Kent OH 44242. opiontki@kent.edu"],"affiliations":[{"raw_affiliation_string":"Department of Biological Sciences, Kent University, Kent, OH, USA","institution_ids":["https://openalex.org/I149910238"]},{"raw_affiliation_string":"Department of Biological Sciences, Kent State University, Kent OH 44242. opiontki@kent.edu","institution_ids":["https://openalex.org/I149910238"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5100380497"],"corresponding_institution_ids":["https://openalex.org/I52357470"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":2,"citation_normalized_percentile":{"value":0.12497681,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":95},"biblio":{"volume":null,"issue":null,"first_page":"1318","last_page":"1322"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10215","display_name":"Semantic Web and Ontologies","score":0.9904999732971191,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10538","display_name":"Data Mining Algorithms and Applications","score":0.9886999726295471,"subfield":{"id":"https://openalex.org/subfields/1710","display_name":"Information Systems"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6156625151634216},{"id":"https://openalex.org/keywords/generalization","display_name":"Generalization","score":0.5586618185043335},{"id":"https://openalex.org/keywords/key","display_name":"Key (lock)","score":0.48651307821273804},{"id":"https://openalex.org/keywords/graph","display_name":"Graph","score":0.44792625308036804},{"id":"https://openalex.org/keywords/topology","display_name":"Topology (electrical circuits)","score":0.4333743751049042},{"id":"https://openalex.org/keywords/simple","display_name":"Simple (philosophy)","score":0.4186375141143799},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.3916054368019104},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.3731876015663147},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.2642713785171509},{"id":"https://openalex.org/keywords/combinatorics","display_name":"Combinatorics","score":0.15419068932533264}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6156625151634216},{"id":"https://openalex.org/C177148314","wikidata":"https://www.wikidata.org/wiki/Q170084","display_name":"Generalization","level":2,"score":0.5586618185043335},{"id":"https://openalex.org/C26517878","wikidata":"https://www.wikidata.org/wiki/Q228039","display_name":"Key (lock)","level":2,"score":0.48651307821273804},{"id":"https://openalex.org/C132525143","wikidata":"https://www.wikidata.org/wiki/Q141488","display_name":"Graph","level":2,"score":0.44792625308036804},{"id":"https://openalex.org/C184720557","wikidata":"https://www.wikidata.org/wiki/Q7825049","display_name":"Topology (electrical circuits)","level":2,"score":0.4333743751049042},{"id":"https://openalex.org/C2780586882","wikidata":"https://www.wikidata.org/wiki/Q7520643","display_name":"Simple (philosophy)","level":2,"score":0.4186375141143799},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.3916054368019104},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.3731876015663147},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.2642713785171509},{"id":"https://openalex.org/C114614502","wikidata":"https://www.wikidata.org/wiki/Q76592","display_name":"Combinatorics","level":1,"score":0.15419068932533264},{"id":"https://openalex.org/C38652104","wikidata":"https://www.wikidata.org/wiki/Q3510521","display_name":"Computer security","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1109/bibe.2007.4375739","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibe.2007.4375739","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2007 IEEE 7th International Symposium on BioInformatics and BioEngineering","raw_type":"proceedings-article"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.324.303","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.324.303","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://www.cse.ohio-state.edu/~agrawal/allpapers/bibe07_02.pdf","raw_type":"text"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":47,"referenced_works":["https://openalex.org/W138492706","https://openalex.org/W202299441","https://openalex.org/W1510939964","https://openalex.org/W1592376869","https://openalex.org/W1970259423","https://openalex.org/W1979960035","https://openalex.org/W2004620268","https://openalex.org/W2012350188","https://openalex.org/W2036868363","https://openalex.org/W2044072204","https://openalex.org/W2061327015","https://openalex.org/W2084976250","https://openalex.org/W2096631127","https://openalex.org/W2103090613","https://openalex.org/W2108150886","https://openalex.org/W2115880858","https://openalex.org/W2124996875","https://openalex.org/W2125680435","https://openalex.org/W2131374321","https://openalex.org/W2136593687","https://openalex.org/W2144903778","https://openalex.org/W2149942697","https://openalex.org/W2152183901","https://openalex.org/W2152698860","https://openalex.org/W2155744163","https://openalex.org/W2158505321","https://openalex.org/W2159203162","https://openalex.org/W2162481448","https://openalex.org/W2163980860","https://openalex.org/W2166057395","https://openalex.org/W2168808732","https://openalex.org/W2170409475","https://openalex.org/W2170726034","https://openalex.org/W2400499165","https://openalex.org/W2435251607","https://openalex.org/W2522853541","https://openalex.org/W2798588639","https://openalex.org/W3140879122","https://openalex.org/W4211138100","https://openalex.org/W4240689716","https://openalex.org/W6608186361","https://openalex.org/W6675519746","https://openalex.org/W6677345342","https://openalex.org/W6682425626","https://openalex.org/W6684952647","https://openalex.org/W6685146747","https://openalex.org/W6717827561"],"related_works":["https://openalex.org/W1585007175","https://openalex.org/W2382521049","https://openalex.org/W3162204513","https://openalex.org/W2144385241","https://openalex.org/W4300101996","https://openalex.org/W2165950148","https://openalex.org/W4253593777","https://openalex.org/W2951497643","https://openalex.org/W2371138613","https://openalex.org/W2048963458"],"abstract_inverted_index":{"In":[0],"this":[1],"paper,":[2],"we":[3,43,92,133,174],"investigate":[4],"a":[5,114,182,201],"new":[6],"approach":[7],"for":[8,22,62,77,186],"literature":[9],"mining.":[10,90],"We":[11,40,57],"use":[12],"frequent":[13,95,157],"subgraph":[14],"mining,":[15,21],"and":[16,29,49,80,87,102,143,170,197],"its":[17],"generalization":[18],"topological":[19,88,96,145,158,177],"structure":[20,89,178],"finding":[23],"interesting":[24],"relationships":[25,167,206],"between":[26,65,168],"gene":[27],"names":[28,210],"other":[30],"key":[31,208],"biological":[32,171],"terms":[33],"from":[34,84],"the":[35,55,111,129,156,194],"text":[36],"of":[37,47,54,117,141],"scientific":[38,105,209],"articles.":[39],"show":[41],"how":[42],"can":[44,180],"find":[45,137],"keywords":[46],"interest":[48],"represent":[50],"them":[51],"as":[52,151],"nodes":[53],"graphs.":[56],"also":[58],"propose":[59],"several":[60,94],"methods":[61,76],"inserting":[63],"edges":[64],"these":[66],"nodes.":[67],"Our":[68],"study":[69,109],"initially":[70],"focused":[71],"on":[72,123],"comparing:":[73],"1)":[74],"different":[75],"constructing":[78,118],"edges,":[79,119],"2)":[81],"patterns":[82,146],"found":[83,162],"sub-graph":[85],"mining":[86,179],"Subsequently,":[91],"analyzed":[93],"minors":[97,159],"reported":[98],"by":[99],"our":[100,108,160],"experiments,":[101],"explained":[103],"their":[104],"significance.":[106],"Overall,":[107,155],"shows":[110],"following.":[112],"First,":[113],"simple":[115],"method":[116],"which":[120],"is":[121],"based":[122],"sliding":[124],"windows,":[125],"seems":[126],"to":[127,136,153,165,199],"provide":[128],"best":[130],"results.":[131],"Second,":[132],"are":[134,189],"able":[135],"much":[138],"larger":[139],"number":[140],"well-known":[142],"meaningful":[144],"with":[147,193],"high":[148],"support":[149],"values,":[150],"compared":[152],"sub-graphs.":[154],"algorithm":[161],"correspond":[163],"well":[164],"known":[166,205],"genes":[169],"terms.":[172,212],"Thus,":[173],"believe":[175],"that":[176],"be":[181],"very":[183],"valuable":[184],"tool":[185],"researchers":[187],"who":[188],"not":[190],"deeply":[191],"familiar":[192],"existing":[195],"literature,":[196],"want":[198],"obtain":[200],"quick":[202],"summary":[203],"about":[204],"among":[207],"or":[211]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2014,"cited_by_count":1}],"updated_date":"2026-04-05T17:49:38.594831","created_date":"2025-10-10T00:00:00"}
