{"id":"https://openalex.org/W2112380088","doi":"https://doi.org/10.1109/bibe.2004.1317376","title":"Dihedral angle database based on disulfide bonds","display_name":"Dihedral angle database based on disulfide bonds","publication_year":2004,"publication_date":"2004-11-30","ids":{"openalex":"https://openalex.org/W2112380088","doi":"https://doi.org/10.1109/bibe.2004.1317376","mag":"2112380088"},"language":"en","primary_location":{"id":"doi:10.1109/bibe.2004.1317376","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibe.2004.1317376","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings. Fourth IEEE Symposium on Bioinformatics and Bioengineering","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5089681901","display_name":"Saravanan Dayalan","orcid":"https://orcid.org/0000-0003-0709-9923"},"institutions":[{"id":"https://openalex.org/I71270174","display_name":"Victoria University","ror":"https://ror.org/04j757h98","country_code":"AU","type":"education","lineage":["https://openalex.org/I71270174"]},{"id":"https://openalex.org/I82951845","display_name":"RMIT University","ror":"https://ror.org/04ttjf776","country_code":"AU","type":"education","lineage":["https://openalex.org/I82951845"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"S. Dayalan","raw_affiliation_strings":["School of Computer Science and Information Technology, RMIT University, Melbourne, Australia","Sch. of Comput. Sci. & Inf. Technol., R. Melbourne Inst. of Technol. Univ., Vic., Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computer Science and Information Technology, RMIT University, Melbourne, Australia","institution_ids":["https://openalex.org/I82951845"]},{"raw_affiliation_string":"Sch. of Comput. Sci. & Inf. Technol., R. Melbourne Inst. of Technol. Univ., Vic., Australia","institution_ids":["https://openalex.org/I71270174"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5011969404","display_name":"Savitri Bevinakoppa","orcid":null},"institutions":[{"id":"https://openalex.org/I71270174","display_name":"Victoria University","ror":"https://ror.org/04j757h98","country_code":"AU","type":"education","lineage":["https://openalex.org/I71270174"]},{"id":"https://openalex.org/I82951845","display_name":"RMIT University","ror":"https://ror.org/04ttjf776","country_code":"AU","type":"education","lineage":["https://openalex.org/I82951845"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"S. Bevinakoppa","raw_affiliation_strings":["School of Computer Science and Information Technology, RMIT University, Melbourne, Australia","Sch. of Comput. Sci. & Inf. Technol., R. Melbourne Inst. of Technol. Univ., Vic., Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computer Science and Information Technology, RMIT University, Melbourne, Australia","institution_ids":["https://openalex.org/I82951845"]},{"raw_affiliation_string":"Sch. of Comput. Sci. & Inf. Technol., R. Melbourne Inst. of Technol. Univ., Vic., Australia","institution_ids":["https://openalex.org/I71270174"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":{"value":0.15823237,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"17","issue":null,"first_page":"442","last_page":"448"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11162","display_name":"Enzyme Structure and Function","score":0.9986000061035156,"subfield":{"id":"https://openalex.org/subfields/2505","display_name":"Materials Chemistry"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11162","display_name":"Enzyme Structure and Function","score":0.9986000061035156,"subfield":{"id":"https://openalex.org/subfields/2505","display_name":"Materials Chemistry"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9973999857902527,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.995199978351593,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/dihedral-angle","display_name":"Dihedral angle","score":0.9962469935417175},{"id":"https://openalex.org/keywords/disulfide-bond","display_name":"Disulfide bond","score":0.7681370377540588},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.561565637588501},{"id":"https://openalex.org/keywords/crystallography","display_name":"Crystallography","score":0.4909506142139435},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.3556475043296814},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.3427930176258087},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.3411429524421692},{"id":"https://openalex.org/keywords/hydrogen-bond","display_name":"Hydrogen bond","score":0.12831071019172668},{"id":"https://openalex.org/keywords/biochemistry","display_name":"Biochemistry","score":0.12585118412971497},{"id":"https://openalex.org/keywords/molecule","display_name":"Molecule","score":0.1251782476902008},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.1061837375164032},{"id":"https://openalex.org/keywords/organic-chemistry","display_name":"Organic chemistry","score":0.08154082298278809}],"concepts":[{"id":"https://openalex.org/C89025888","wikidata":"https://www.wikidata.org/wiki/Q911907","display_name":"Dihedral angle","level":4,"score":0.9962469935417175},{"id":"https://openalex.org/C27256138","wikidata":"https://www.wikidata.org/wiki/Q1230226","display_name":"Disulfide bond","level":2,"score":0.7681370377540588},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.561565637588501},{"id":"https://openalex.org/C8010536","wikidata":"https://www.wikidata.org/wiki/Q160398","display_name":"Crystallography","level":1,"score":0.4909506142139435},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.3556475043296814},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.3427930176258087},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.3411429524421692},{"id":"https://openalex.org/C112887158","wikidata":"https://www.wikidata.org/wiki/Q169324","display_name":"Hydrogen bond","level":3,"score":0.12831071019172668},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.12585118412971497},{"id":"https://openalex.org/C32909587","wikidata":"https://www.wikidata.org/wiki/Q11369","display_name":"Molecule","level":2,"score":0.1251782476902008},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.1061837375164032},{"id":"https://openalex.org/C178790620","wikidata":"https://www.wikidata.org/wiki/Q11351","display_name":"Organic chemistry","level":1,"score":0.08154082298278809}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/bibe.2004.1317376","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibe.2004.1317376","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings. Fourth IEEE Symposium on Bioinformatics and Bioengineering","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":7,"referenced_works":["https://openalex.org/W1567117750","https://openalex.org/W2010991345","https://openalex.org/W2124924243","https://openalex.org/W2130479394","https://openalex.org/W2163526800","https://openalex.org/W2474592159","https://openalex.org/W4252684946"],"related_works":["https://openalex.org/W2128884622","https://openalex.org/W2112380088","https://openalex.org/W1715467939","https://openalex.org/W4318816969","https://openalex.org/W2161756346","https://openalex.org/W1977613337","https://openalex.org/W2075921262","https://openalex.org/W2300182960","https://openalex.org/W2338444630","https://openalex.org/W2103852637"],"abstract_inverted_index":{"Dihedral":[0],"angle":[1,11,25,56,70],"databases":[2,5,26],"are":[3,120,150],"protein":[4,183],"that":[6,104,145],"store":[7],"all":[8],"occurring":[9],"dihedral":[10,24,55,69,77,89,106,200],"(phi,":[12],"psi)":[13],"values":[14,52,107,126,147,156,179,201],"of":[15,21,37,112,114],"amino":[16,115],"acids":[17,116],"in":[18,53,127,148,157],"proteins.":[19],"None":[20],"the":[22,48,105,110,131,146,154,178],"existing":[23],"have":[27],"classified":[28,74],"their":[29,124],"data":[30,135],"based":[31,58,136],"on":[32,59,137],"an":[33],"important":[34],"bonding":[35],"characteristic":[36],"proteins":[38,81,93,203],"called":[39],"disulfide":[40,60,86,96,138,207],"bonds.":[41,97,139],"In":[42],"this":[43,162,165],"paper,":[44],"using":[45],"statistical":[46,141],"analysis,":[47],"need":[49,132],"to":[50,102,133,143],"classify":[51,134],"a":[54,182],"database":[57,71,78,90],"bonds":[61,208],"is":[62,73,100,175],"shown.":[63],"This":[64],"paper":[65],"discusses":[66],"how":[67,177,191],"our":[68],"(DAB)":[72],"into":[75],"two;":[76],"(DABSS)":[79],"having":[80,92],"with":[82,204],"at":[83],"least":[84],"one":[85],"bond":[87],"and":[88,159,167,172,190,205],"(DABNSS)":[91],"without":[94,206],"any":[95],"Statistical":[98],"analysis":[99,142,166],"used":[101],"show":[103,144],"(and":[108],"hence":[109],"structure)":[111],"sub-sequences":[113],"obtained":[117,180],"from":[118,123,153,202],"DABSS":[119,158,171],"significantly":[121,151],"different":[122,152,188],"corresponding":[125,155],"DABNSS,":[128],"thus":[129],"justifying":[130],"Using":[140,164],"DAB":[149,193],"DABNSS":[160,173],"strengthens":[161],"justification.":[163],"by":[168,181],"querying":[169,192],"DAB,":[170],"it":[174,198],"shown":[176],"structure":[184],"prediction":[185],"program":[186],"yields":[187],"results":[189,196],"gives":[194],"mixed":[195],"as":[197],"contains":[199],"together.":[209]},"counts_by_year":[],"updated_date":"2026-06-11T09:08:48.828518","created_date":"2025-10-10T00:00:00"}
