{"id":"https://openalex.org/W2169150522","doi":"https://doi.org/10.1109/bibe.2004.1317358","title":"Genome-wide alternative splicing events detection through analysis of large scale ESTs","display_name":"Genome-wide alternative splicing events detection through analysis of large scale ESTs","publication_year":2004,"publication_date":"2004-10-19","ids":{"openalex":"https://openalex.org/W2169150522","doi":"https://doi.org/10.1109/bibe.2004.1317358","mag":"2169150522"},"language":"en","primary_location":{"id":"doi:10.1109/bibe.2004.1317358","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibe.2004.1317358","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings. Fourth IEEE Symposium on Bioinformatics and Bioengineering","raw_type":"proceedings-article"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5030877187","display_name":"Fang-Rong Hsu","orcid":"https://orcid.org/0000-0001-9791-317X"},"institutions":[{"id":"https://openalex.org/I143578492","display_name":"Asia University","ror":"https://ror.org/038a1tp19","country_code":"TW","type":"education","lineage":["https://openalex.org/I143578492"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"F.R. Hsu","raw_affiliation_strings":["Department of Bioinformatics, Taichung Healthcare and Management University, Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Bioinformatics, Taichung Healthcare and Management University, Taiwan","institution_ids":["https://openalex.org/I143578492"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5108798289","display_name":"Hwan\u2010You Chang","orcid":null},"institutions":[{"id":"https://openalex.org/I25846049","display_name":"National Tsing Hua University","ror":"https://ror.org/00zdnkx70","country_code":"TW","type":"education","lineage":["https://openalex.org/I25846049"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Hwan-You Chang","raw_affiliation_strings":["Department of Life Science, National Tsing Hua University, Hsinchu, Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Life Science, National Tsing Hua University, Hsinchu, Taiwan","institution_ids":["https://openalex.org/I25846049"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5039839389","display_name":"Yaw-Ling Lin","orcid":"https://orcid.org/0000-0001-8151-684X"},"institutions":[{"id":"https://openalex.org/I177918364","display_name":"Providence University","ror":"https://ror.org/03fcpsq87","country_code":"TW","type":"education","lineage":["https://openalex.org/I177918364"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Yaw-Lin Lin","raw_affiliation_strings":["Department of Computer Science and Information Management, Providence University, Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Information Management, Providence University, Taiwan","institution_ids":["https://openalex.org/I177918364"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5108455747","display_name":"Yin-Te Tsai","orcid":null},"institutions":[{"id":"https://openalex.org/I177918364","display_name":"Providence University","ror":"https://ror.org/03fcpsq87","country_code":"TW","type":"education","lineage":["https://openalex.org/I177918364"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Yin-Te Tsai","raw_affiliation_strings":["Department of Computer Science and Information Management, Providence University, Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Information Management, Providence University, Taiwan","institution_ids":["https://openalex.org/I177918364"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5022352163","display_name":"Hui-Ling Peng","orcid":null},"institutions":[{"id":"https://openalex.org/I143578492","display_name":"Asia University","ror":"https://ror.org/038a1tp19","country_code":"TW","type":"education","lineage":["https://openalex.org/I143578492"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Hui-Ling Peng","raw_affiliation_strings":["Department of Bioinformatics, Taichung Healthcare and Management University, Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Bioinformatics, Taichung Healthcare and Management University, Taiwan","institution_ids":["https://openalex.org/I143578492"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5080046504","display_name":"Ying-Tsong Chen","orcid":"https://orcid.org/0000-0003-1337-4127"},"institutions":[{"id":"https://openalex.org/I143578492","display_name":"Asia University","ror":"https://ror.org/038a1tp19","country_code":"TW","type":"education","lineage":["https://openalex.org/I143578492"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Ying Tsong Chen","raw_affiliation_strings":["Department of Bioinformatics, Taichung Healthcare and Management University, Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Bioinformatics, Taichung Healthcare and Management University, Taiwan","institution_ids":["https://openalex.org/I143578492"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5018205961","display_name":"Che Feng Chen","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Che Feng Chen","raw_affiliation_strings":["Department of Information Technology, Taichung Healthcare and Management University, Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Information Technology, Taichung Healthcare and Management University, Taiwan","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5110136040","display_name":"Chia Yang Cheng","orcid":null},"institutions":[{"id":"https://openalex.org/I143578492","display_name":"Asia University","ror":"https://ror.org/038a1tp19","country_code":"TW","type":"education","lineage":["https://openalex.org/I143578492"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Chia Yang Cheng","raw_affiliation_strings":["Department of Bioinformatics, Taichung Healthcare and Management University, Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Bioinformatics, Taichung Healthcare and Management University, Taiwan","institution_ids":["https://openalex.org/I143578492"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5002466771","display_name":"Chia-Jung Liu","orcid":null},"institutions":[{"id":"https://openalex.org/I143578492","display_name":"Asia University","ror":"https://ror.org/038a1tp19","country_code":"TW","type":"education","lineage":["https://openalex.org/I143578492"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Chia-Jung Liu","raw_affiliation_strings":["Department of Bioinformatics, Taichung Healthcare and Management University, Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Bioinformatics, Taichung Healthcare and Management University, Taiwan","institution_ids":["https://openalex.org/I143578492"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5065690548","display_name":"Min Yao Shih","orcid":null},"institutions":[{"id":"https://openalex.org/I143578492","display_name":"Asia University","ror":"https://ror.org/038a1tp19","country_code":"TW","type":"education","lineage":["https://openalex.org/I143578492"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Min Yao Shih","raw_affiliation_strings":["Department of Bioinformatics, Taichung Healthcare and Management University, Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Bioinformatics, Taichung Healthcare and Management University, Taiwan","institution_ids":["https://openalex.org/I143578492"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":2.9459,"has_fulltext":false,"cited_by_count":4,"citation_normalized_percentile":{"value":0.91357234,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":null,"biblio":{"volume":"24","issue":null,"first_page":"310","last_page":"316"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10604","display_name":"RNA Research and Splicing","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11482","display_name":"RNA modifications and cancer","score":0.9986000061035156,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/expressed-sequence-tag","display_name":"Expressed sequence tag","score":0.7995002269744873},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.7069078087806702},{"id":"https://openalex.org/keywords/rna-splicing","display_name":"RNA splicing","score":0.6734142303466797},{"id":"https://openalex.org/keywords/homo-sapiens","display_name":"Homo sapiens","score":0.6265953183174133},{"id":"https://openalex.org/keywords/alternative-splicing","display_name":"Alternative splicing","score":0.6217313408851624},{"id":"https://openalex.org/keywords/caenorhabditis-elegans","display_name":"Caenorhabditis elegans","score":0.6031482219696045},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.5801167488098145},{"id":"https://openalex.org/keywords/drosophila-melanogaster","display_name":"Drosophila melanogaster","score":0.5764122605323792},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.5272539854049683},{"id":"https://openalex.org/keywords/transcriptome","display_name":"Transcriptome","score":0.5209032893180847},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5125886797904968},{"id":"https://openalex.org/keywords/sequence-analysis","display_name":"Sequence analysis","score":0.4655623435974121},{"id":"https://openalex.org/keywords/genomics","display_name":"Genomics","score":0.45611023902893066},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.4495472013950348},{"id":"https://openalex.org/keywords/exon","display_name":"Exon","score":0.18000784516334534},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.17638283967971802},{"id":"https://openalex.org/keywords/rna","display_name":"RNA","score":0.058955997228622437}],"concepts":[{"id":"https://openalex.org/C149034497","wikidata":"https://www.wikidata.org/wiki/Q1384835","display_name":"Expressed sequence tag","level":4,"score":0.7995002269744873},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.7069078087806702},{"id":"https://openalex.org/C54458228","wikidata":"https://www.wikidata.org/wiki/Q237218","display_name":"RNA splicing","level":4,"score":0.6734142303466797},{"id":"https://openalex.org/C2777938546","wikidata":"https://www.wikidata.org/wiki/Q5","display_name":"Homo sapiens","level":2,"score":0.6265953183174133},{"id":"https://openalex.org/C194583182","wikidata":"https://www.wikidata.org/wiki/Q21114084","display_name":"Alternative splicing","level":4,"score":0.6217313408851624},{"id":"https://openalex.org/C2778944004","wikidata":"https://www.wikidata.org/wiki/Q91703","display_name":"Caenorhabditis elegans","level":3,"score":0.6031482219696045},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.5801167488098145},{"id":"https://openalex.org/C2780104201","wikidata":"https://www.wikidata.org/wiki/Q130888","display_name":"Drosophila melanogaster","level":3,"score":0.5764122605323792},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.5272539854049683},{"id":"https://openalex.org/C162317418","wikidata":"https://www.wikidata.org/wiki/Q252857","display_name":"Transcriptome","level":4,"score":0.5209032893180847},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5125886797904968},{"id":"https://openalex.org/C61053724","wikidata":"https://www.wikidata.org/wiki/Q1154615","display_name":"Sequence analysis","level":3,"score":0.4655623435974121},{"id":"https://openalex.org/C189206191","wikidata":"https://www.wikidata.org/wiki/Q222046","display_name":"Genomics","level":4,"score":0.45611023902893066},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.4495472013950348},{"id":"https://openalex.org/C36823959","wikidata":"https://www.wikidata.org/wiki/Q373027","display_name":"Exon","level":3,"score":0.18000784516334534},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.17638283967971802},{"id":"https://openalex.org/C67705224","wikidata":"https://www.wikidata.org/wiki/Q11053","display_name":"RNA","level":3,"score":0.058955997228622437},{"id":"https://openalex.org/C144024400","wikidata":"https://www.wikidata.org/wiki/Q21201","display_name":"Sociology","level":0,"score":0.0},{"id":"https://openalex.org/C19165224","wikidata":"https://www.wikidata.org/wiki/Q23404","display_name":"Anthropology","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/bibe.2004.1317358","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibe.2004.1317358","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings. Fourth IEEE Symposium on Bioinformatics and Bioengineering","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":15,"referenced_works":["https://openalex.org/W1481278428","https://openalex.org/W1994154030","https://openalex.org/W1997297065","https://openalex.org/W2028279880","https://openalex.org/W2033310094","https://openalex.org/W2077689651","https://openalex.org/W2089465951","https://openalex.org/W2112616522","https://openalex.org/W2118189700","https://openalex.org/W2125201432","https://openalex.org/W2130368032","https://openalex.org/W2139455449","https://openalex.org/W2148165244","https://openalex.org/W2151308110","https://openalex.org/W2154583350"],"related_works":["https://openalex.org/W4313474347","https://openalex.org/W122800452","https://openalex.org/W2993659554","https://openalex.org/W279682321","https://openalex.org/W4384347930","https://openalex.org/W2183871674","https://openalex.org/W3120667788","https://openalex.org/W390558816","https://openalex.org/W4385516583","https://openalex.org/W2369579146"],"abstract_inverted_index":{"In":[0],"the":[1,5,15],"past":[2],"several":[3],"years,":[4],"analysis":[6,55],"of":[7,17,56],"alternative":[8,49,62],"splicing":[9,50,63],"and":[10,38,78],"its":[11],"application":[12],"to":[13],"identify":[14],"origins":[16],"disease":[18],"has":[19],"been":[20],"gaining":[21],"momentum.":[22],"Therefore,":[23],"we":[24,60],"developed":[25],"a":[26],"value":[27],"added":[28],"transcriptome":[29],"database":[30],"(Avatar).":[31],"We":[32,46],"mapped":[33],"EST":[34],"(expressed":[35],"sequence":[36],"tag)":[37],"mRNA":[39],"sequences":[40],"onto":[41],"whole":[42],"human":[43],"genomic":[44],"sequence.":[45],"identified":[47],"9,937":[48],"relationships":[51],"genes":[52],"through":[53],"an":[54],"large-scale":[57],"ESTs.":[58],"Besides,":[59],"provided":[61],"information":[64],"for":[65],"six":[66],"organisms:":[67],"Homo":[68],"sapiens,":[69],"Mus":[70],"musculus,":[71],"Rattus":[72],"norvegiens,":[73],"Caenorhabditis":[74],"elegans,":[75],"Drosophila":[76],"melanogaster":[77],"Arabidopsis":[79],"thaliana.":[80]},"counts_by_year":[],"updated_date":"2026-07-29T14:22:42.915294","created_date":"2025-10-10T00:00:00"}
