{"id":"https://openalex.org/W1850807971","doi":"https://doi.org/10.1109/bibe.2003.1188960","title":"Streamlining biological data analysis using BioFlow","display_name":"Streamlining biological data analysis using BioFlow","publication_year":2003,"publication_date":"2003-11-21","ids":{"openalex":"https://openalex.org/W1850807971","doi":"https://doi.org/10.1109/bibe.2003.1188960","mag":"1850807971"},"language":"en","primary_location":{"id":"doi:10.1109/bibe.2003.1188960","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibe.2003.1188960","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Third IEEE Symposium on Bioinformatics and Bioengineering, 2003. Proceedings.","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5111495480","display_name":"Zhijie Guan","orcid":null},"institutions":[{"id":"https://openalex.org/I99041443","display_name":"Mississippi State University","ror":"https://ror.org/0432jq872","country_code":"US","type":"education","lineage":["https://openalex.org/I4210141039","https://openalex.org/I99041443"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Z. Guan","raw_affiliation_strings":["Department of Computer Science, Mississippi State University, USA","Dept. of Comput. Sci., Mississippi State Univ., MS, USA#TAB#"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Mississippi State University, USA","institution_ids":["https://openalex.org/I99041443"]},{"raw_affiliation_string":"Dept. of Comput. Sci., Mississippi State Univ., MS, USA#TAB#","institution_ids":["https://openalex.org/I99041443"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5030091324","display_name":"Hasan M. Jamil","orcid":"https://orcid.org/0000-0002-3124-3780"},"institutions":[{"id":"https://openalex.org/I99041443","display_name":"Mississippi State University","ror":"https://ror.org/0432jq872","country_code":"US","type":"education","lineage":["https://openalex.org/I4210141039","https://openalex.org/I99041443"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"H.M. Jamil","raw_affiliation_strings":["Department of Computer Science, Mississippi State University, USA","Dept. of Comput. Sci., Mississippi State Univ., MS, USA#TAB#"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Mississippi State University, USA","institution_ids":["https://openalex.org/I99041443"]},{"raw_affiliation_string":"Dept. of Comput. Sci., Mississippi State Univ., MS, USA#TAB#","institution_ids":["https://openalex.org/I99041443"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5111495480"],"corresponding_institution_ids":["https://openalex.org/I99041443"],"apc_list":null,"apc_paid":null,"fwci":3.7215,"has_fulltext":false,"cited_by_count":11,"citation_normalized_percentile":{"value":0.93901515,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"258","last_page":"262"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},"topics":[{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},{"id":"https://openalex.org/T10679","display_name":"Service-Oriented Architecture and Web Services","score":0.9894000291824341,"subfield":{"id":"https://openalex.org/subfields/1710","display_name":"Information Systems"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10715","display_name":"Distributed and Parallel Computing Systems","score":0.9685999751091003,"subfield":{"id":"https://openalex.org/subfields/1705","display_name":"Computer Networks and Communications"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8868102431297302},{"id":"https://openalex.org/keywords/exploit","display_name":"Exploit","score":0.6412036418914795},{"id":"https://openalex.org/keywords/workflow","display_name":"Workflow","score":0.5961941480636597},{"id":"https://openalex.org/keywords/the-internet","display_name":"The Internet","score":0.4878940284252167},{"id":"https://openalex.org/keywords/semantic-web","display_name":"Semantic Web","score":0.4613734483718872},{"id":"https://openalex.org/keywords/process","display_name":"Process (computing)","score":0.45018988847732544},{"id":"https://openalex.org/keywords/biological-data","display_name":"Biological data","score":0.4337612986564636},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.4280795454978943},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.40565037727355957},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.22345367074012756}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8868102431297302},{"id":"https://openalex.org/C165696696","wikidata":"https://www.wikidata.org/wiki/Q11287","display_name":"Exploit","level":2,"score":0.6412036418914795},{"id":"https://openalex.org/C177212765","wikidata":"https://www.wikidata.org/wiki/Q627335","display_name":"Workflow","level":2,"score":0.5961941480636597},{"id":"https://openalex.org/C110875604","wikidata":"https://www.wikidata.org/wiki/Q75","display_name":"The Internet","level":2,"score":0.4878940284252167},{"id":"https://openalex.org/C2129575","wikidata":"https://www.wikidata.org/wiki/Q54837","display_name":"Semantic Web","level":2,"score":0.4613734483718872},{"id":"https://openalex.org/C98045186","wikidata":"https://www.wikidata.org/wiki/Q205663","display_name":"Process (computing)","level":2,"score":0.45018988847732544},{"id":"https://openalex.org/C201797286","wikidata":"https://www.wikidata.org/wiki/Q4914986","display_name":"Biological data","level":2,"score":0.4337612986564636},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.4280795454978943},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.40565037727355957},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.22345367074012756},{"id":"https://openalex.org/C38652104","wikidata":"https://www.wikidata.org/wiki/Q3510521","display_name":"Computer security","level":1,"score":0.0},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.0},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/bibe.2003.1188960","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bibe.2003.1188960","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Third IEEE Symposium on Bioinformatics and Bioengineering, 2003. Proceedings.","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":7,"referenced_works":["https://openalex.org/W87123013","https://openalex.org/W1520779252","https://openalex.org/W2035244158","https://openalex.org/W2055151038","https://openalex.org/W2164507889","https://openalex.org/W6603466204","https://openalex.org/W7075714922"],"related_works":["https://openalex.org/W17155033","https://openalex.org/W3207760230","https://openalex.org/W1496222301","https://openalex.org/W4312814274","https://openalex.org/W1590307681","https://openalex.org/W2536018345","https://openalex.org/W4285370786","https://openalex.org/W2296488620","https://openalex.org/W2358353312","https://openalex.org/W2353836703"],"abstract_inverted_index":{"For":[0],"several":[1],"obvious":[2],"and":[3,16,32,41,76,96,119,148],"practical":[4],"reasons,":[5],"resources":[6,23,101],"needed":[7],"for":[8,84,150,173],"biological":[9,174],"data":[10,26,40],"analysis":[11,28],"are":[12,17],"often":[13],"geographically":[14],"distributed":[15],"accessible":[18],"through":[19],"the":[20,67,94,100,108,112,131,164],"Internet.":[21],"Such":[22,35],"usually":[24],"include":[25],"repositories,":[27],"tools,":[29],"digital":[30],"documents,":[31],"so":[33],"on.":[34],"an":[36],"arrangement":[37],"warrants":[38],"sophisticated":[39],"process":[42],"integration":[43],"tools":[44],"in":[45,73,79,158,169],"order":[46,80],"to":[47,81,93,145,163],"design":[48],"ad":[49,85,151],"hoc":[50,86,152],"higher":[51],"level":[52],"applications":[53],"using":[54,122],"these":[55],"online":[56],"resources.":[57],"In":[58],"this":[59],"paper":[60],"we":[61],"present":[62],"such":[63],"a":[64],"system,":[65,114],"called":[66],"BioFlow,":[68],"that":[69,130],"exploits":[70],"recent":[71],"advances":[72],"workflow":[74],"technology":[75],"Internet":[77],"computing":[78,172],"provide":[82],"support":[83],"application":[87,153],"development":[88],"by":[89,103],"hiding":[90],"aspects":[91],"related":[92],"heterogeneity":[95],"distributive":[97],"nature":[98],"of":[99,111,166],"required":[102],"user":[104],"applications.":[105,127,175],"We":[106,128],"introduce":[107],"salient":[109],"features":[110],"BioFlow":[113,136,159],"discuss":[115],"briefly":[116],"its":[117],"architecture":[118],"implementation":[120],"issues":[121],"simple":[123],"but":[124],"real":[125],"life":[126],"demonstrate":[129],"declarative":[132],"language":[133],"on":[134],"which":[135],"is":[137,160],"based":[138],"makes":[139],"our":[140],"system":[141],"quite":[142],"intuitive,":[143],"easy":[144],"use,":[146],"effective":[147],"efficient":[149],"design.":[154],"The":[155],"approach":[156],"taken":[157],"somewhat":[161],"similar":[162],"idea":[165],"web":[167,171],"services":[168],"semantic":[170]},"counts_by_year":[],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
