{"id":"https://openalex.org/W3187220992","doi":"https://doi.org/10.1109/bhi50953.2021.9508569","title":"Utility of High-Throughput Imaging Mass Cytometry for Cancer Research: A feasibility study","display_name":"Utility of High-Throughput Imaging Mass Cytometry for Cancer Research: A feasibility study","publication_year":2021,"publication_date":"2021-07-27","ids":{"openalex":"https://openalex.org/W3187220992","doi":"https://doi.org/10.1109/bhi50953.2021.9508569","mag":"3187220992"},"language":"en","primary_location":{"id":"doi:10.1109/bhi50953.2021.9508569","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bhi50953.2021.9508569","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2021 IEEE EMBS International Conference on Biomedical and Health Informatics (BHI)","raw_type":"proceedings-article"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5074542117","display_name":"Sindhura Thirumal","orcid":"https://orcid.org/0000-0003-2195-4121"},"institutions":[{"id":"https://openalex.org/I204722609","display_name":"Queen's University","ror":"https://ror.org/02y72wh86","country_code":"CA","type":"education","lineage":["https://openalex.org/I204722609"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Sindhura Thirumal","raw_affiliation_strings":["Queen\u2019s University, Kingston, Canada","Queen's University, Kingston, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Queen\u2019s University, Kingston, Canada","institution_ids":["https://openalex.org/I204722609"]},{"raw_affiliation_string":"Queen's University, Kingston, Canada","institution_ids":["https://openalex.org/I204722609"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5002749573","display_name":"Amoon Jamzad","orcid":"https://orcid.org/0000-0002-0828-4365"},"institutions":[{"id":"https://openalex.org/I204722609","display_name":"Queen's University","ror":"https://ror.org/02y72wh86","country_code":"CA","type":"education","lineage":["https://openalex.org/I204722609"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Amoon Jamzad","raw_affiliation_strings":["Queen\u2019s University, Kingston, Canada","Queen's University, Kingston, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Queen\u2019s University, Kingston, Canada","institution_ids":["https://openalex.org/I204722609"]},{"raw_affiliation_string":"Queen's University, Kingston, Canada","institution_ids":["https://openalex.org/I204722609"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5079042259","display_name":"Tiziana Cotechini","orcid":"https://orcid.org/0000-0001-6762-3649"},"institutions":[{"id":"https://openalex.org/I204722609","display_name":"Queen's University","ror":"https://ror.org/02y72wh86","country_code":"CA","type":"education","lineage":["https://openalex.org/I204722609"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Tiziana Cotechini","raw_affiliation_strings":["Queen\u2019s University, Kingston, Canada","Queen's University, Kingston, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Queen\u2019s University, Kingston, Canada","institution_ids":["https://openalex.org/I204722609"]},{"raw_affiliation_string":"Queen's University, Kingston, Canada","institution_ids":["https://openalex.org/I204722609"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5021668638","display_name":"Charles T. Hindmarch","orcid":null},"institutions":[{"id":"https://openalex.org/I204722609","display_name":"Queen's University","ror":"https://ror.org/02y72wh86","country_code":"CA","type":"education","lineage":["https://openalex.org/I204722609"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Charles T. Hindmarch","raw_affiliation_strings":["Queen\u2019s University, Kingston, Canada","Queen's University, Kingston, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Queen\u2019s University, Kingston, Canada","institution_ids":["https://openalex.org/I204722609"]},{"raw_affiliation_string":"Queen's University, Kingston, Canada","institution_ids":["https://openalex.org/I204722609"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5050632344","display_name":"C\u00e9line Hardy","orcid":"https://orcid.org/0000-0003-1719-7164"},"institutions":[{"id":"https://openalex.org/I204722609","display_name":"Queen's University","ror":"https://ror.org/02y72wh86","country_code":"CA","type":"education","lineage":["https://openalex.org/I204722609"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Celine Hardy","raw_affiliation_strings":["Queen\u2019s University, Kingston, Canada","Queen's University, Kingston, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Queen\u2019s University, Kingston, Canada","institution_ids":["https://openalex.org/I204722609"]},{"raw_affiliation_string":"Queen's University, Kingston, Canada","institution_ids":["https://openalex.org/I204722609"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5069519575","display_name":"Nathalia Kim","orcid":"https://orcid.org/0009-0002-6445-5592"},"institutions":[{"id":"https://openalex.org/I204722609","display_name":"Queen's University","ror":"https://ror.org/02y72wh86","country_code":"CA","type":"education","lineage":["https://openalex.org/I204722609"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Nathalia Kim","raw_affiliation_strings":["Queen\u2019s University, Kingston, Canada","Queen's University, Kingston, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Queen\u2019s University, Kingston, Canada","institution_ids":["https://openalex.org/I204722609"]},{"raw_affiliation_string":"Queen's University, Kingston, Canada","institution_ids":["https://openalex.org/I204722609"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5000336389","display_name":"Amber L. Simpson","orcid":"https://orcid.org/0000-0002-4387-8417"},"institutions":[{"id":"https://openalex.org/I204722609","display_name":"Queen's University","ror":"https://ror.org/02y72wh86","country_code":"CA","type":"education","lineage":["https://openalex.org/I204722609"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Amber Simpson","raw_affiliation_strings":["Queen\u2019s University, Kingston, Canada","Queen's University, Kingston, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Queen\u2019s University, Kingston, Canada","institution_ids":["https://openalex.org/I204722609"]},{"raw_affiliation_string":"Queen's University, Kingston, Canada","institution_ids":["https://openalex.org/I204722609"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5074231558","display_name":"Charles H. Graham","orcid":"https://orcid.org/0000-0002-7014-8639"},"institutions":[{"id":"https://openalex.org/I204722609","display_name":"Queen's University","ror":"https://ror.org/02y72wh86","country_code":"CA","type":"education","lineage":["https://openalex.org/I204722609"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Charles H. Graham","raw_affiliation_strings":["Queen\u2019s University, Kingston, Canada","Queen's University, Kingston, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Queen\u2019s University, Kingston, Canada","institution_ids":["https://openalex.org/I204722609"]},{"raw_affiliation_string":"Queen's University, Kingston, Canada","institution_ids":["https://openalex.org/I204722609"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5058902093","display_name":"David M. Berman","orcid":"https://orcid.org/0000-0001-5985-3698"},"institutions":[{"id":"https://openalex.org/I204722609","display_name":"Queen's University","ror":"https://ror.org/02y72wh86","country_code":"CA","type":"education","lineage":["https://openalex.org/I204722609"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"David M. Berman","raw_affiliation_strings":["Queen\u2019s University, Kingston, Canada","Queen's University, Kingston, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Queen\u2019s University, Kingston, Canada","institution_ids":["https://openalex.org/I204722609"]},{"raw_affiliation_string":"Queen's University, Kingston, Canada","institution_ids":["https://openalex.org/I204722609"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5088442918","display_name":"D. Robert Siemens","orcid":"https://orcid.org/0000-0002-3203-6468"},"institutions":[{"id":"https://openalex.org/I204722609","display_name":"Queen's University","ror":"https://ror.org/02y72wh86","country_code":"CA","type":"education","lineage":["https://openalex.org/I204722609"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"D. Robert Siemens","raw_affiliation_strings":["Queen\u2019s University, Kingston, Canada","Queen's University, Kingston, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Queen\u2019s University, Kingston, Canada","institution_ids":["https://openalex.org/I204722609"]},{"raw_affiliation_string":"Queen's University, Kingston, Canada","institution_ids":["https://openalex.org/I204722609"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5040401197","display_name":"Parvin Mousavi","orcid":"https://orcid.org/0000-0002-1630-7379"},"institutions":[{"id":"https://openalex.org/I204722609","display_name":"Queen's University","ror":"https://ror.org/02y72wh86","country_code":"CA","type":"education","lineage":["https://openalex.org/I204722609"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Parvin Mousavi","raw_affiliation_strings":["Queen\u2019s University, Kingston, Canada","Queen's University, Kingston, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Queen\u2019s University, Kingston, Canada","institution_ids":["https://openalex.org/I204722609"]},{"raw_affiliation_string":"Queen's University, Kingston, Canada","institution_ids":["https://openalex.org/I204722609"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I204722609"],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":"2018","issue":null,"first_page":"1","last_page":"4"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11289","display_name":"Single-cell and spatial transcriptomics","score":0.9986000061035156,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11289","display_name":"Single-cell and spatial transcriptomics","score":0.9986000061035156,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11313","display_name":"Immune cells in cancer","score":0.9868000149726868,"subfield":{"id":"https://openalex.org/subfields/2403","display_name":"Immunology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10066","display_name":"Gut microbiota and health","score":0.9789000153541565,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/pipeline","display_name":"Pipeline (software)","score":0.8220336437225342},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7100971341133118},{"id":"https://openalex.org/keywords/throughput","display_name":"Throughput","score":0.5265867114067078},{"id":"https://openalex.org/keywords/data-set","display_name":"Data set","score":0.5027604103088379},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.48749709129333496},{"id":"https://openalex.org/keywords/data-acquisition","display_name":"Data acquisition","score":0.4135914146900177},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.35707783699035645},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.3429434299468994}],"concepts":[{"id":"https://openalex.org/C43521106","wikidata":"https://www.wikidata.org/wiki/Q2165493","display_name":"Pipeline (software)","level":2,"score":0.8220336437225342},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7100971341133118},{"id":"https://openalex.org/C157764524","wikidata":"https://www.wikidata.org/wiki/Q1383412","display_name":"Throughput","level":3,"score":0.5265867114067078},{"id":"https://openalex.org/C58489278","wikidata":"https://www.wikidata.org/wiki/Q1172284","display_name":"Data set","level":2,"score":0.5027604103088379},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.48749709129333496},{"id":"https://openalex.org/C163985040","wikidata":"https://www.wikidata.org/wiki/Q1172399","display_name":"Data acquisition","level":2,"score":0.4135914146900177},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.35707783699035645},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.3429434299468994},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C76155785","wikidata":"https://www.wikidata.org/wiki/Q418","display_name":"Telecommunications","level":1,"score":0.0},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0},{"id":"https://openalex.org/C555944384","wikidata":"https://www.wikidata.org/wiki/Q249","display_name":"Wireless","level":2,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/bhi50953.2021.9508569","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bhi50953.2021.9508569","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2021 IEEE EMBS International Conference on Biomedical and Health Informatics (BHI)","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":10,"referenced_works":["https://openalex.org/W1631320694","https://openalex.org/W2395763454","https://openalex.org/W2585179645","https://openalex.org/W2591628935","https://openalex.org/W2767198233","https://openalex.org/W2782982023","https://openalex.org/W2897536537","https://openalex.org/W3123114241","https://openalex.org/W3145895630","https://openalex.org/W3156564118"],"related_works":["https://openalex.org/W2136583354","https://openalex.org/W2111238207","https://openalex.org/W3037187668","https://openalex.org/W2760721665","https://openalex.org/W4372306488","https://openalex.org/W4210912696","https://openalex.org/W4234772502","https://openalex.org/W2375218795","https://openalex.org/W2393010557","https://openalex.org/W2594414941"],"abstract_inverted_index":{"The":[0,41],"Hyperion":[1],"<sup":[2],"xmlns:mml=\"http://www.w3.org/1998/Math/MathML\"":[3],"xmlns:xlink=\"http://www.w3.org/1999/xlink\">TM</sup>":[4],"Imaging":[5],"System":[6],"is":[7,43,162],"a":[8,37,77,87,152],"novel":[9,88],"technology":[10,42],"that":[11],"uses":[12],"imaging":[13],"mass":[14],"cytometry":[15],"(IMC)":[16],"to":[17,33,50,66,91,111,157],"improve":[18],"upon":[19],"current":[20],"methods":[21],"of":[22,31,54,95,98,138,146],"tissue":[23,39,99],"imaging,":[24],"enabling":[25],"sub-cellular":[26],"spatial":[27],"resolution":[28],"and":[29,46,109,124,135],"acquisition":[30],"up":[32],"37":[34],"proteins":[35],"on":[36],"single":[38],"slide.":[40],"fairly":[44],"new,":[45],"thus":[47],"we":[48,61],"want":[49],"explore":[51],"the":[52,93,118,144,148],"types":[53],"analysis":[55,64,70],"possible":[56],"with":[57,151],"these":[58],"data.":[59,120],"Here,":[60],"introduce":[62],"an":[63,163],"pipeline":[65,123],"utilize":[67],"machine":[68],"learning-based":[69],"for":[71,129,166],"IMC":[72,102],"data":[73,75,155],"using":[74,117,147],"from":[76,101],"muscle":[78],"invasive":[79],"bladder":[80],"cancer":[81],"patient":[82],"cohort.":[83],"We":[84],"also":[85],"propose":[86],"augmentation":[89,105,125],"method":[90,106,126],"handle":[92],"challenge":[94],"low":[96],"number":[97],"samples":[100],"studies.":[103],"Our":[104,141],"was":[107],"validated":[108],"shown":[110],"perform":[112],"better":[113],"than":[114],"when":[115],"only":[116],"original":[119],"Both":[121],"our":[122],"show":[127],"promise":[128],"applications":[130],"in":[131],"future":[132],"research":[133],"studies":[134],"clinical":[136,168],"evaluation":[137],"this":[139],"technology.":[140],"results":[142],"indicate":[143],"feasibility":[145],"proposed":[149],"framework":[150],"more":[153],"robust":[154],"set":[156],"identify":[158],"prognostic":[159],"features,":[160],"which":[161],"important":[164],"foundation":[165],"further":[167],"research.":[169]},"counts_by_year":[],"updated_date":"2026-07-14T23:27:15.235271","created_date":"2025-10-10T00:00:00"}
