{"id":"https://openalex.org/W2342461929","doi":"https://doi.org/10.1109/bhi.2016.7455825","title":"Heterogeneity of colorectal cancer cell positions as a cell viability biometrie","display_name":"Heterogeneity of colorectal cancer cell positions as a cell viability biometrie","publication_year":2016,"publication_date":"2016-02-01","ids":{"openalex":"https://openalex.org/W2342461929","doi":"https://doi.org/10.1109/bhi.2016.7455825","mag":"2342461929"},"language":"en","primary_location":{"id":"doi:10.1109/bhi.2016.7455825","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bhi.2016.7455825","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2016 IEEE-EMBS International Conference on Biomedical and Health Informatics (BHI)","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5022064950","display_name":"Aydin Saribudak","orcid":"https://orcid.org/0000-0003-0792-1251"},"institutions":[{"id":"https://openalex.org/I125687163","display_name":"City College of New York","ror":"https://ror.org/00wmhkr98","country_code":"US","type":"education","lineage":["https://openalex.org/I125687163"]},{"id":"https://openalex.org/I174216632","display_name":"City University of New York","ror":"https://ror.org/00453a208","country_code":"US","type":"education","lineage":["https://openalex.org/I174216632"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Aydin Saribudak","raw_affiliation_strings":["Electrical Eng. Dept., City College of the City University of New York, NY"],"affiliations":[{"raw_affiliation_string":"Electrical Eng. Dept., City College of the City University of New York, NY","institution_ids":["https://openalex.org/I174216632","https://openalex.org/I125687163"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5016721995","display_name":"Herman Kucharavy","orcid":null},"institutions":[{"id":"https://openalex.org/I125687163","display_name":"City College of New York","ror":"https://ror.org/00wmhkr98","country_code":"US","type":"education","lineage":["https://openalex.org/I125687163"]},{"id":"https://openalex.org/I174216632","display_name":"City University of New York","ror":"https://ror.org/00453a208","country_code":"US","type":"education","lineage":["https://openalex.org/I174216632"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Herman Kucharavy","raw_affiliation_strings":["Biology Dept., City College of the City University of New York, NY"],"affiliations":[{"raw_affiliation_string":"Biology Dept., City College of the City University of New York, NY","institution_ids":["https://openalex.org/I174216632","https://openalex.org/I125687163"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5018239132","display_name":"Karen Hubbard","orcid":"https://orcid.org/0000-0003-4723-9126"},"institutions":[{"id":"https://openalex.org/I174216632","display_name":"City University of New York","ror":"https://ror.org/00453a208","country_code":"US","type":"education","lineage":["https://openalex.org/I174216632"]},{"id":"https://openalex.org/I125687163","display_name":"City College of New York","ror":"https://ror.org/00wmhkr98","country_code":"US","type":"education","lineage":["https://openalex.org/I125687163"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Karen Hubbard","raw_affiliation_strings":["Biology Dept., City College of the City University of New York, NY"],"affiliations":[{"raw_affiliation_string":"Biology Dept., City College of the City University of New York, NY","institution_ids":["https://openalex.org/I174216632","https://openalex.org/I125687163"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5060658112","display_name":"M. \u00dcmit Uyar","orcid":"https://orcid.org/0000-0001-6268-8259"},"institutions":[{"id":"https://openalex.org/I125687163","display_name":"City College of New York","ror":"https://ror.org/00wmhkr98","country_code":"US","type":"education","lineage":["https://openalex.org/I125687163"]},{"id":"https://openalex.org/I174216632","display_name":"City University of New York","ror":"https://ror.org/00453a208","country_code":"US","type":"education","lineage":["https://openalex.org/I174216632"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"M. Umit Uyar","raw_affiliation_strings":["Electrical Eng. Dept., City College of the City University of New York, NY"],"affiliations":[{"raw_affiliation_string":"Electrical Eng. Dept., City College of the City University of New York, NY","institution_ids":["https://openalex.org/I174216632","https://openalex.org/I125687163"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5022064950"],"corresponding_institution_ids":["https://openalex.org/I125687163","https://openalex.org/I174216632"],"apc_list":null,"apc_paid":null,"fwci":0.5512,"has_fulltext":false,"cited_by_count":3,"citation_normalized_percentile":{"value":0.67100646,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":96,"max":97},"biblio":{"volume":null,"issue":null,"first_page":"21","last_page":"24"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10379","display_name":"Cellular Mechanics and Interactions","score":0.9815000295639038,"subfield":{"id":"https://openalex.org/subfields/1307","display_name":"Cell Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10379","display_name":"Cellular Mechanics and Interactions","score":0.9815000295639038,"subfield":{"id":"https://openalex.org/subfields/1307","display_name":"Cell Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9810000061988831,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11190","display_name":"3D Printing in Biomedical Research","score":0.9625999927520752,"subfield":{"id":"https://openalex.org/subfields/2204","display_name":"Biomedical Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/viability-assay","display_name":"Viability assay","score":0.8045604228973389},{"id":"https://openalex.org/keywords/folfox","display_name":"FOLFOX","score":0.7355689406394958},{"id":"https://openalex.org/keywords/colorectal-cancer","display_name":"Colorectal cancer","score":0.6325202584266663},{"id":"https://openalex.org/keywords/cell","display_name":"Cell","score":0.5830999612808228},{"id":"https://openalex.org/keywords/cancer-cell","display_name":"Cancer cell","score":0.5614383816719055},{"id":"https://openalex.org/keywords/tumor-microenvironment","display_name":"Tumor microenvironment","score":0.5518404841423035},{"id":"https://openalex.org/keywords/spatial-heterogeneity","display_name":"Spatial heterogeneity","score":0.4425482749938965},{"id":"https://openalex.org/keywords/cancer","display_name":"Cancer","score":0.43815168738365173},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.41979801654815674},{"id":"https://openalex.org/keywords/cell-biology","display_name":"Cell biology","score":0.3307206630706787},{"id":"https://openalex.org/keywords/cancer-research","display_name":"Cancer research","score":0.3225722312927246},{"id":"https://openalex.org/keywords/biochemistry","display_name":"Biochemistry","score":0.12639933824539185},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.08539733290672302}],"concepts":[{"id":"https://openalex.org/C53227056","wikidata":"https://www.wikidata.org/wiki/Q189152","display_name":"Viability assay","level":3,"score":0.8045604228973389},{"id":"https://openalex.org/C2778260052","wikidata":"https://www.wikidata.org/wiki/Q117636","display_name":"FOLFOX","level":5,"score":0.7355689406394958},{"id":"https://openalex.org/C526805850","wikidata":"https://www.wikidata.org/wiki/Q188874","display_name":"Colorectal cancer","level":3,"score":0.6325202584266663},{"id":"https://openalex.org/C1491633281","wikidata":"https://www.wikidata.org/wiki/Q7868","display_name":"Cell","level":2,"score":0.5830999612808228},{"id":"https://openalex.org/C96232424","wikidata":"https://www.wikidata.org/wiki/Q4118072","display_name":"Cancer cell","level":3,"score":0.5614383816719055},{"id":"https://openalex.org/C2776107976","wikidata":"https://www.wikidata.org/wiki/Q1786433","display_name":"Tumor microenvironment","level":3,"score":0.5518404841423035},{"id":"https://openalex.org/C180478619","wikidata":"https://www.wikidata.org/wiki/Q7574066","display_name":"Spatial heterogeneity","level":2,"score":0.4425482749938965},{"id":"https://openalex.org/C121608353","wikidata":"https://www.wikidata.org/wiki/Q12078","display_name":"Cancer","level":2,"score":0.43815168738365173},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.41979801654815674},{"id":"https://openalex.org/C95444343","wikidata":"https://www.wikidata.org/wiki/Q7141","display_name":"Cell biology","level":1,"score":0.3307206630706787},{"id":"https://openalex.org/C502942594","wikidata":"https://www.wikidata.org/wiki/Q3421914","display_name":"Cancer research","level":1,"score":0.3225722312927246},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.12639933824539185},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.08539733290672302},{"id":"https://openalex.org/C2780962732","wikidata":"https://www.wikidata.org/wiki/Q422327","display_name":"Oxaliplatin","level":4,"score":0.0},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/bhi.2016.7455825","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bhi.2016.7455825","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2016 IEEE-EMBS International Conference on Biomedical and Health Informatics (BHI)","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[{"display_name":"Good health and well-being","id":"https://metadata.un.org/sdg/3","score":0.6700000166893005}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":20,"referenced_works":["https://openalex.org/W1485718253","https://openalex.org/W1487777700","https://openalex.org/W1492325666","https://openalex.org/W1553901424","https://openalex.org/W1877687928","https://openalex.org/W2031135203","https://openalex.org/W2032101051","https://openalex.org/W2058563279","https://openalex.org/W2077619776","https://openalex.org/W2125997891","https://openalex.org/W2136502970","https://openalex.org/W2140723257","https://openalex.org/W2145840532","https://openalex.org/W2153221343","https://openalex.org/W2317236738","https://openalex.org/W2326455002","https://openalex.org/W2331628193","https://openalex.org/W4246145738","https://openalex.org/W6629125140","https://openalex.org/W7043280449"],"related_works":["https://openalex.org/W3035301382","https://openalex.org/W3108910336","https://openalex.org/W3122865115","https://openalex.org/W2809146871","https://openalex.org/W2330718236","https://openalex.org/W3203299958","https://openalex.org/W3014942027","https://openalex.org/W2574781998","https://openalex.org/W3013564512","https://openalex.org/W3006386809"],"abstract_inverted_index":{"In":[0,107],"this":[1],"paper,":[2],"we":[3,112],"quantify":[4],"spatial":[5,94,119,142],"heterogeneity":[6,95,120,143],"in":[7,19,45,96,116,126,149],"the":[8,24,75,85,89,122],"positions":[9,99],"of":[10,26,40,74,131,136],"live":[11,97,117],"cells":[12],"as":[13,121,128,154],"potential":[14,145],"biomarkers":[15],"for":[16],"cell":[17,38,98,118,123,139],"viability":[18,73,124,140],"3d":[20],"in-vitro":[21,151],"microenvironment":[22,152],"under":[23,79],"impact":[25,81],"anti-cancer":[27],"agents.":[28],"We":[29],"present":[30],"three":[31,109],"case":[32,110],"studies":[33],"using":[34],"human":[35,76],"colorectal":[36],"cancer":[37,77],"lines":[39],"HCT-116,":[41],"SW-620":[42],"and":[43,57,63,141],"SW-480":[44],"48-hour":[46],"experiments.":[47,86],"With":[48],"our":[49],"data":[50],"acquisition":[51],"system":[52],"guiding":[53],"an":[54,114],"inverted":[55],"microscope":[56],"a":[58,129,155],"digital":[59],"camera,":[60],"bright":[61],"field":[62],"fluorescent":[64],"images":[65,90],"are":[66,82,100],"captured":[67,91],"at":[68],"different":[69],"time":[70,127],"points.":[71],"The":[72,133],"cells,":[78],"FOLFOX":[80],"measured":[83],"throughout":[84],"By":[87],"processing":[88],"from":[92],"microenvironment,":[93],"computed":[101],"based":[102],"on":[103],"poisson":[104],"point":[105],"process.":[106],"all":[108],"studies,":[111],"detect":[113],"increase":[115],"decreases":[125],"result":[130,135],"FOLFOX.":[132],"encouraging":[134],"correlation":[137],"between":[138],"has":[144],"to":[146],"be":[147],"used":[148],"3D":[150],"assays":[153],"biomarker.":[156]},"counts_by_year":[{"year":2016,"cited_by_count":3}],"updated_date":"2025-11-25T21:42:39.735039","created_date":"2025-10-10T00:00:00"}
