{"id":"https://openalex.org/W2091478289","doi":"https://doi.org/10.1109/acssc.2013.6810270","title":"Waveform processing for protein multi-alignment by mapping location, structure and property function attributes","display_name":"Waveform processing for protein multi-alignment by mapping location, structure and property function attributes","publication_year":2013,"publication_date":"2013-11-01","ids":{"openalex":"https://openalex.org/W2091478289","doi":"https://doi.org/10.1109/acssc.2013.6810270","mag":"2091478289"},"language":"en","primary_location":{"id":"doi:10.1109/acssc.2013.6810270","is_oa":false,"landing_page_url":"https://doi.org/10.1109/acssc.2013.6810270","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2013 Asilomar Conference on Signals, Systems and Computers","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5074449649","display_name":"Brian O\u2019Donnell","orcid":"https://orcid.org/0000-0001-6085-6327"},"institutions":[{"id":"https://openalex.org/I55732556","display_name":"Arizona State University","ror":"https://ror.org/03efmqc40","country_code":"US","type":"education","lineage":["https://openalex.org/I55732556"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Brian O'Donnell","raw_affiliation_strings":["School of Electrical Computer and Energy Engineering, Arizona State University, Tempe, AZ"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Electrical Computer and Energy Engineering, Arizona State University, Tempe, AZ","institution_ids":["https://openalex.org/I55732556"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5083642413","display_name":"Alexander Maurer","orcid":"https://orcid.org/0000-0002-6964-802X"},"institutions":[{"id":"https://openalex.org/I55732556","display_name":"Arizona State University","ror":"https://ror.org/03efmqc40","country_code":"US","type":"education","lineage":["https://openalex.org/I55732556"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Alexander Maurer","raw_affiliation_strings":["School of Electrical Computer and Energy Engineering, Arizona State University, Tempe, AZ"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Electrical Computer and Energy Engineering, Arizona State University, Tempe, AZ","institution_ids":["https://openalex.org/I55732556"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5069246416","display_name":"Antonia Papandreou\u2010Suppappola","orcid":"https://orcid.org/0000-0002-5223-6256"},"institutions":[{"id":"https://openalex.org/I55732556","display_name":"Arizona State University","ror":"https://ror.org/03efmqc40","country_code":"US","type":"education","lineage":["https://openalex.org/I55732556"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Antonia Papandreou-Suppappola","raw_affiliation_strings":["School of Electrical Computer and Energy Engineering, Arizona State University, Tempe, AZ"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Electrical Computer and Energy Engineering, Arizona State University, Tempe, AZ","institution_ids":["https://openalex.org/I55732556"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.1496,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":{"value":0.57618106,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":94},"biblio":{"volume":"19","issue":null,"first_page":"248","last_page":"252"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9988999962806702,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9988999962806702,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9986000061035156,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9979000091552734,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/waveform","display_name":"Waveform","score":0.7434276342391968},{"id":"https://openalex.org/keywords/property","display_name":"Property (philosophy)","score":0.7164775133132935},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6165370345115662},{"id":"https://openalex.org/keywords/function","display_name":"Function (biology)","score":0.5212072134017944},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.37098440527915955},{"id":"https://openalex.org/keywords/telecommunications","display_name":"Telecommunications","score":0.12573373317718506}],"concepts":[{"id":"https://openalex.org/C197424946","wikidata":"https://www.wikidata.org/wiki/Q1165717","display_name":"Waveform","level":3,"score":0.7434276342391968},{"id":"https://openalex.org/C189950617","wikidata":"https://www.wikidata.org/wiki/Q937228","display_name":"Property (philosophy)","level":2,"score":0.7164775133132935},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6165370345115662},{"id":"https://openalex.org/C14036430","wikidata":"https://www.wikidata.org/wiki/Q3736076","display_name":"Function (biology)","level":2,"score":0.5212072134017944},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.37098440527915955},{"id":"https://openalex.org/C76155785","wikidata":"https://www.wikidata.org/wiki/Q418","display_name":"Telecommunications","level":1,"score":0.12573373317718506},{"id":"https://openalex.org/C554190296","wikidata":"https://www.wikidata.org/wiki/Q47528","display_name":"Radar","level":2,"score":0.0},{"id":"https://openalex.org/C78458016","wikidata":"https://www.wikidata.org/wiki/Q840400","display_name":"Evolutionary biology","level":1,"score":0.0},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/acssc.2013.6810270","is_oa":false,"landing_page_url":"https://doi.org/10.1109/acssc.2013.6810270","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2013 Asilomar Conference on Signals, Systems and Computers","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":25,"referenced_works":["https://openalex.org/W1546341583","https://openalex.org/W1585607520","https://openalex.org/W1986665610","https://openalex.org/W2022058405","https://openalex.org/W2024633223","https://openalex.org/W2047458638","https://openalex.org/W2081771568","https://openalex.org/W2090617952","https://openalex.org/W2099364528","https://openalex.org/W2101362041","https://openalex.org/W2110434201","https://openalex.org/W2127122014","https://openalex.org/W2127981150","https://openalex.org/W2129639723","https://openalex.org/W2131617076","https://openalex.org/W2133070552","https://openalex.org/W2142753274","https://openalex.org/W2146143038","https://openalex.org/W2152210972","https://openalex.org/W2158083345","https://openalex.org/W2158714788","https://openalex.org/W2162913079","https://openalex.org/W2165366575","https://openalex.org/W4206694472","https://openalex.org/W6684585901"],"related_works":["https://openalex.org/W2748952813","https://openalex.org/W1974895211","https://openalex.org/W2176409448","https://openalex.org/W2129841057","https://openalex.org/W3040712279","https://openalex.org/W2364769705","https://openalex.org/W2056136368","https://openalex.org/W2374664672","https://openalex.org/W4367555392","https://openalex.org/W2883092465"],"abstract_inverted_index":{"We":[0,18],"propose":[1],"a":[2,10,22,31,71,83],"pairwise":[3],"protein":[4,16],"structure":[5,26],"alignment":[6,91],"approach":[7,92],"based":[8],"on":[9,21],"joint":[11,90],"similarity":[12,72],"measure":[13,73],"of":[14,88],"multiple":[15,77],"attributes.":[17,56,78],"map":[19],"information":[20],"protein's":[23],"sequence":[24],"location,":[25],"and":[27],"characteristic":[28],"properties":[29],"onto":[30],"highly-localized":[32],"three-dimensional":[33],"Gaussian":[34],"waveform.":[35],"By":[36],"allowing":[37],"the":[38,45,54,61,76,86,89],"waveform":[39,68],"to":[40,52,74,93],"undergo":[41],"unique":[42],"transformations":[43],"in":[44],"time-frequency":[46],"plane,":[47],"we":[48],"allocate":[49],"distinct":[50],"parameters":[51],"represent":[53],"different":[55],"Protein":[57],"matching":[58],"by":[59],"expanding":[60],"mapped":[62],"waveforms":[63],"using":[64,80],"appropriately":[65],"designed":[66],"basis":[67],"functions":[69],"provides":[70],"encompass":[75],"Simulations":[79],"data":[81],"from":[82],"database":[84],"demonstrate":[85],"performance":[87],"infer":[94],"relationships":[95],"between":[96],"proteins.":[97]},"counts_by_year":[{"year":2015,"cited_by_count":1}],"updated_date":"2026-06-11T09:08:48.828518","created_date":"2025-10-10T00:00:00"}