{"id":"https://openalex.org/W7123350006","doi":"https://doi.org/10.1109/access.2026.3652320","title":"A Step Toward Instrument-Agnostic Plankton Classification in the Shared Label Space of IFCB and FlowCam Data","display_name":"A Step Toward Instrument-Agnostic Plankton Classification in the Shared Label Space of IFCB and FlowCam Data","publication_year":2026,"publication_date":"2026-01-01","ids":{"openalex":"https://openalex.org/W7123350006","doi":"https://doi.org/10.1109/access.2026.3652320"},"language":null,"primary_location":{"id":"doi:10.1109/access.2026.3652320","is_oa":true,"landing_page_url":"https://doi.org/10.1109/access.2026.3652320","pdf_url":null,"source":{"id":"https://openalex.org/S2485537415","display_name":"IEEE Access","issn_l":"2169-3536","issn":["2169-3536"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Access","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.1109/access.2026.3652320","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5122865344","display_name":"Prabhat Chauhan","orcid":null},"institutions":[{"id":"https://openalex.org/I23923803","display_name":"University of Exeter","ror":"https://ror.org/03yghzc09","country_code":"GB","type":"education","lineage":["https://openalex.org/I23923803"]}],"countries":["GB"],"is_corresponding":true,"raw_author_name":"Prabhat Chauhan","raw_affiliation_strings":["University of Exeter, Exeter, U.K"],"affiliations":[{"raw_affiliation_string":"University of Exeter, Exeter, U.K","institution_ids":["https://openalex.org/I23923803"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5104051436","display_name":"James R. Clark","orcid":null},"institutions":[{"id":"https://openalex.org/I2802566253","display_name":"Plymouth Marine Laboratory","ror":"https://ror.org/05av9mn02","country_code":"GB","type":"facility","lineage":["https://openalex.org/I2802566253"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"James R. Clark","raw_affiliation_strings":["Plymouth Marine Laboratory, Plymouth, U.K"],"affiliations":[{"raw_affiliation_string":"Plymouth Marine Laboratory, Plymouth, U.K","institution_ids":["https://openalex.org/I2802566253"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5045425649","display_name":"Elaine S. Fileman","orcid":"https://orcid.org/0000-0002-7795-7535"},"institutions":[{"id":"https://openalex.org/I2802566253","display_name":"Plymouth Marine Laboratory","ror":"https://ror.org/05av9mn02","country_code":"GB","type":"facility","lineage":["https://openalex.org/I2802566253"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Elaine S. Fileman","raw_affiliation_strings":["Plymouth Marine Laboratory, Plymouth, U.K"],"affiliations":[{"raw_affiliation_string":"Plymouth Marine Laboratory, Plymouth, U.K","institution_ids":["https://openalex.org/I2802566253"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5082914041","display_name":"Claire E. Widdicombe","orcid":"https://orcid.org/0000-0002-1688-0212"},"institutions":[{"id":"https://openalex.org/I2802566253","display_name":"Plymouth Marine Laboratory","ror":"https://ror.org/05av9mn02","country_code":"GB","type":"facility","lineage":["https://openalex.org/I2802566253"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Claire E. Widdicombe","raw_affiliation_strings":["Plymouth Marine Laboratory, Plymouth, U.K"],"affiliations":[{"raw_affiliation_string":"Plymouth Marine Laboratory, Plymouth, U.K","institution_ids":["https://openalex.org/I2802566253"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5083640952","display_name":"Saskia R\u00fchl","orcid":null},"institutions":[{"id":"https://openalex.org/I2802566253","display_name":"Plymouth Marine Laboratory","ror":"https://ror.org/05av9mn02","country_code":"GB","type":"facility","lineage":["https://openalex.org/I2802566253"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Saskia R\u00fchl","raw_affiliation_strings":["Plymouth Marine Laboratory, Plymouth, U.K"],"affiliations":[{"raw_affiliation_string":"Plymouth Marine Laboratory, Plymouth, U.K","institution_ids":["https://openalex.org/I2802566253"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5122856145","display_name":"Sareh Rowlands","orcid":null},"institutions":[{"id":"https://openalex.org/I23923803","display_name":"University of Exeter","ror":"https://ror.org/03yghzc09","country_code":"GB","type":"education","lineage":["https://openalex.org/I23923803"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Sareh Rowlands","raw_affiliation_strings":["University of Exeter, Exeter, U.K"],"affiliations":[{"raw_affiliation_string":"University of Exeter, Exeter, U.K","institution_ids":["https://openalex.org/I23923803"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5122865344"],"corresponding_institution_ids":["https://openalex.org/I23923803"],"apc_list":{"value":1850,"currency":"USD","value_usd":1850},"apc_paid":{"value":1850,"currency":"USD","value_usd":1850},"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.08309272,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"14","issue":null,"first_page":"9473","last_page":"9489"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12697","display_name":"Water Quality Monitoring Technologies","score":0.21279999613761902,"subfield":{"id":"https://openalex.org/subfields/2312","display_name":"Water Science and Technology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T12697","display_name":"Water Quality Monitoring Technologies","score":0.21279999613761902,"subfield":{"id":"https://openalex.org/subfields/2312","display_name":"Water Science and Technology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.09560000151395798,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10032","display_name":"Marine and coastal ecosystems","score":0.05609999969601631,"subfield":{"id":"https://openalex.org/subfields/1910","display_name":"Oceanography"},"field":{"id":"https://openalex.org/fields/19","display_name":"Earth and Planetary Sciences"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/pooling","display_name":"Pooling","score":0.763700008392334},{"id":"https://openalex.org/keywords/metadata","display_name":"Metadata","score":0.73089998960495},{"id":"https://openalex.org/keywords/generalization","display_name":"Generalization","score":0.6098999977111816},{"id":"https://openalex.org/keywords/image","display_name":"Image (mathematics)","score":0.45489999651908875},{"id":"https://openalex.org/keywords/range","display_name":"Range (aeronautics)","score":0.43970000743865967},{"id":"https://openalex.org/keywords/representation","display_name":"Representation (politics)","score":0.43130001425743103},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.3783000111579895},{"id":"https://openalex.org/keywords/plankton","display_name":"Plankton","score":0.3774000108242035}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7839999794960022},{"id":"https://openalex.org/C70437156","wikidata":"https://www.wikidata.org/wiki/Q7228652","display_name":"Pooling","level":2,"score":0.763700008392334},{"id":"https://openalex.org/C93518851","wikidata":"https://www.wikidata.org/wiki/Q180160","display_name":"Metadata","level":2,"score":0.73089998960495},{"id":"https://openalex.org/C177148314","wikidata":"https://www.wikidata.org/wiki/Q170084","display_name":"Generalization","level":2,"score":0.6098999977111816},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5223000049591064},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.45489999651908875},{"id":"https://openalex.org/C204323151","wikidata":"https://www.wikidata.org/wiki/Q905424","display_name":"Range (aeronautics)","level":2,"score":0.43970000743865967},{"id":"https://openalex.org/C2776359362","wikidata":"https://www.wikidata.org/wiki/Q2145286","display_name":"Representation (politics)","level":3,"score":0.43130001425743103},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.3783000111579895},{"id":"https://openalex.org/C108469399","wikidata":"https://www.wikidata.org/wiki/Q25367","display_name":"Plankton","level":2,"score":0.3774000108242035},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.3741999864578247},{"id":"https://openalex.org/C75294576","wikidata":"https://www.wikidata.org/wiki/Q5165192","display_name":"Contextual image classification","level":3,"score":0.37389999628067017},{"id":"https://openalex.org/C9417928","wikidata":"https://www.wikidata.org/wiki/Q1070689","display_name":"Image processing","level":3,"score":0.3610999882221222},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.352400004863739},{"id":"https://openalex.org/C36503486","wikidata":"https://www.wikidata.org/wiki/Q11235244","display_name":"Domain (mathematical analysis)","level":2,"score":0.32350000739097595},{"id":"https://openalex.org/C9770341","wikidata":"https://www.wikidata.org/wiki/Q1938983","display_name":"Geospatial analysis","level":2,"score":0.3215999901294708},{"id":"https://openalex.org/C2780586882","wikidata":"https://www.wikidata.org/wiki/Q7520643","display_name":"Simple (philosophy)","level":2,"score":0.3093000054359436},{"id":"https://openalex.org/C67186912","wikidata":"https://www.wikidata.org/wiki/Q367664","display_name":"Data modeling","level":2,"score":0.3084999918937683},{"id":"https://openalex.org/C205372480","wikidata":"https://www.wikidata.org/wiki/Q210521","display_name":"Image resolution","level":2,"score":0.29170000553131104},{"id":"https://openalex.org/C51632099","wikidata":"https://www.wikidata.org/wiki/Q3985153","display_name":"Training set","level":2,"score":0.29019999504089355},{"id":"https://openalex.org/C69744172","wikidata":"https://www.wikidata.org/wiki/Q860822","display_name":"Image fusion","level":3,"score":0.28369998931884766},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.2612999975681305},{"id":"https://openalex.org/C1667742","wikidata":"https://www.wikidata.org/wiki/Q10927554","display_name":"Image retrieval","level":3,"score":0.2540999948978424},{"id":"https://openalex.org/C33954974","wikidata":"https://www.wikidata.org/wiki/Q486494","display_name":"Sensor fusion","level":2,"score":0.2500999867916107}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/access.2026.3652320","is_oa":true,"landing_page_url":"https://doi.org/10.1109/access.2026.3652320","pdf_url":null,"source":{"id":"https://openalex.org/S2485537415","display_name":"IEEE Access","issn_l":"2169-3536","issn":["2169-3536"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Access","raw_type":"journal-article"}],"best_oa_location":{"id":"doi:10.1109/access.2026.3652320","is_oa":true,"landing_page_url":"https://doi.org/10.1109/access.2026.3652320","pdf_url":null,"source":{"id":"https://openalex.org/S2485537415","display_name":"IEEE Access","issn_l":"2169-3536","issn":["2169-3536"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Access","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/14","display_name":"Life below water","score":0.8416773080825806}],"awards":[{"id":"https://openalex.org/G6187749485","display_name":null,"funder_award_id":"UKRI041","funder_id":"https://openalex.org/F4320314731","funder_display_name":"UK Research and Innovation"}],"funders":[{"id":"https://openalex.org/F4320314731","display_name":"UK Research and Innovation","ror":"https://ror.org/001aqnf71"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":54,"referenced_works":["https://openalex.org/W1498436455","https://openalex.org/W1551909886","https://openalex.org/W1604680558","https://openalex.org/W1774232365","https://openalex.org/W1881066983","https://openalex.org/W1941659294","https://openalex.org/W1968588660","https://openalex.org/W1986667786","https://openalex.org/W1989016021","https://openalex.org/W2015745448","https://openalex.org/W2019720139","https://openalex.org/W2112796928","https://openalex.org/W2141350700","https://openalex.org/W2148143831","https://openalex.org/W2153237278","https://openalex.org/W2194775991","https://openalex.org/W2346813889","https://openalex.org/W2513863019","https://openalex.org/W2612719531","https://openalex.org/W2618530766","https://openalex.org/W2758584002","https://openalex.org/W2760103357","https://openalex.org/W2767106145","https://openalex.org/W2794172213","https://openalex.org/W2896018215","https://openalex.org/W2903748065","https://openalex.org/W2904997484","https://openalex.org/W2917262027","https://openalex.org/W2936503027","https://openalex.org/W2941857669","https://openalex.org/W2954996726","https://openalex.org/W2964288524","https://openalex.org/W2974343313","https://openalex.org/W2981368934","https://openalex.org/W3000086239","https://openalex.org/W3030938069","https://openalex.org/W3084305023","https://openalex.org/W3094054616","https://openalex.org/W3124892547","https://openalex.org/W3170570768","https://openalex.org/W4200514541","https://openalex.org/W4205814812","https://openalex.org/W4223521528","https://openalex.org/W4239510810","https://openalex.org/W4380996403","https://openalex.org/W4382202755","https://openalex.org/W4383105644","https://openalex.org/W4389203851","https://openalex.org/W4394760969","https://openalex.org/W4402815712","https://openalex.org/W4402915516","https://openalex.org/W4404006451","https://openalex.org/W4404762921","https://openalex.org/W4413003525"],"related_works":[],"abstract_inverted_index":{"The":[0,53,137],"large":[1],"range":[2],"of":[3,14,26,37,47,127,163,169,240],"marine":[4],"plankton":[5,28,76],"cell":[6],"and/or":[7],"body":[8],"sizes":[9],"has":[10],"necessitated":[11],"the":[12,27,33,38,45,74,83,101,123,202,216,226,230,275],"emergence":[13],"various":[15],"automated":[16,51],"imaging":[17],"devices,":[18],"each":[19],"tailored":[20],"to":[21,44,55,72,122,215,281],"image":[22,40,64,174,185],"a":[23,88,107,135,142,160,220],"different":[24],"part":[25],"size":[29],"spectrum.":[30],"Variations":[31],"in":[32,141],"format":[34],"and":[35,57,69,97,134,153,157,237,265,287],"resolution":[36],"resulting":[39],"data":[41,65,186],"have":[42],"led":[43],"development":[46],"bespoke,":[48],"often":[49],"instrument-specific":[50],"classifiers.":[52],"need":[54],"train":[56],"validate":[58],"multiple":[59,67],"classifiers":[60],"complicates":[61],"working":[62],"with":[63,86,176,229],"from":[66,212],"cameras,":[68],"hinders":[70],"efforts":[71],"study":[73],"full":[75],"community.":[77],"In":[78],"this":[79],"study,":[80],"we":[81,117,172],"discuss":[82],"challenges":[84],"associated":[85],"building":[87],"multi-instrument":[89,231],"classifier,":[90],"including":[91],"handling":[92],"domain":[93],"shifts":[94],"between":[95],"cameras":[96],"class":[98],"imbalances":[99],"within":[100],"individual":[102,148],"datasets.":[103],"We":[104],"then":[105,158],"present":[106],"scalable,":[108],"flexible":[109],"framework":[110],"<italic":[111,119],"xmlns:mml=\"http://www.w3.org/1998/Math/MathML\"":[112,120],"xmlns:xlink=\"http://www.w3.org/1999/xlink\">towards":[113],"instrument-agnostic":[114],"classification</i>,":[115],"which":[116],"explicitly":[118],"xmlns:xlink=\"http://www.w3.org/1999/xlink\">bound":[121],"shared":[124,199],"label":[125,200],"space</i>":[126],"two":[128],"cameras:":[129],"an":[130],"Imaging":[131],"FlowCytobot":[132],"(IFCB)":[133],"FlowCam.":[136],"model":[138,232],"was":[139,195],"trained":[140],"two-step":[143],"process,":[144],"focusing":[145],"first":[146],"on":[147,159],"datasets":[149,264],"comprising":[150],"145":[151],"IFCB":[152],"193":[154],"FlowCam":[155],"categories,":[156],"combined":[161,217],"dataset":[162],"236":[164],"categories.":[165],"To":[166],"take":[167],"advantage":[168],"multimodal":[170],"fusion,":[171],"integrated":[173],"features":[175],"29":[177],"metadata":[178],"attributes":[179],"for":[180,182,255,277],"FlowCam;":[181],"IFCB,":[183],"only":[184],"(with":[187],"simple":[188],"synthetic":[189],"attributes)":[190],"were":[191],"available,":[192],"so":[193],"fusion":[194],"not":[196],"applied.":[197],"Within":[198],"spaces,":[201],"results":[203,273],"demonstrate":[204],"fewer":[205],"low-performing":[206],"categories":[207],"(F1<":[208],"0.5)":[209],"when":[210],"moving":[211],"single-instrument":[213],"training":[214],"model,":[218],"alongside":[219],"4.5%":[221],"average":[222],"F1":[223],"improvement":[224],"among":[225],"hardest":[227],"classes,":[228],"achieving":[233],"84.6%":[234],"test":[235],"accuracy,":[236],"improved":[238],"representation":[239],"rare":[241],"taxa.":[242,257],"These":[243],"findings":[244],"indicate":[245],"that":[246],"pooling":[247],"heterogeneous":[248],"imagery":[249],"can":[250],"enhance":[251],"generalization":[252,260],"across":[253],"instruments":[254],"overlapping":[256],"However,":[258],"true":[259],"would":[261],"require":[262],"additional":[263],"richer":[266],"cross-modal":[267],"alignment":[268],"(e.g.,":[269],"attention-based":[270],"conditioning).":[271],"Our":[272],"underscore":[274],"potential":[276],"scalable":[278],"cross-platform":[279],"solutions":[280],"advance":[282],"ecological":[283],"research,":[284],"resource":[285],"management,":[286],"environmental":[288],"conservation":[289],"efforts.":[290]},"counts_by_year":[],"updated_date":"2026-04-09T08:11:56.329763","created_date":"2026-01-14T00:00:00"}
