{"id":"https://openalex.org/W4407247012","doi":"https://doi.org/10.1109/access.2025.3539837","title":"Validation Framework for Analyzing Complex Anatomical Structures: Application of L-System Models","display_name":"Validation Framework for Analyzing Complex Anatomical Structures: Application of L-System Models","publication_year":2025,"publication_date":"2025-01-01","ids":{"openalex":"https://openalex.org/W4407247012","doi":"https://doi.org/10.1109/access.2025.3539837"},"language":"en","primary_location":{"id":"doi:10.1109/access.2025.3539837","is_oa":true,"landing_page_url":"https://doi.org/10.1109/access.2025.3539837","pdf_url":null,"source":{"id":"https://openalex.org/S2485537415","display_name":"IEEE Access","issn_l":"2169-3536","issn":["2169-3536"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Access","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.1109/access.2025.3539837","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5041074444","display_name":"Katarzyna Heryan","orcid":"https://orcid.org/0000-0001-8104-7828"},"institutions":[{"id":"https://openalex.org/I126596746","display_name":"Jagiellonian University","ror":"https://ror.org/03bqmcz70","country_code":"PL","type":"education","lineage":["https://openalex.org/I126596746"]},{"id":"https://openalex.org/I4210087266","display_name":"Institute of Computer Science","ror":"https://ror.org/003fvp964","country_code":"PL","type":"facility","lineage":["https://openalex.org/I4210087266","https://openalex.org/I99542240"]},{"id":"https://openalex.org/I686019","display_name":"AGH University of Krakow","ror":"https://ror.org/00bas1c41","country_code":"PL","type":"education","lineage":["https://openalex.org/I686019"]}],"countries":["PL"],"is_corresponding":false,"raw_author_name":"Katarzyna Heryan","raw_affiliation_strings":["Institute of Computer Science, AGH University of Krakow, Kraków, Poland","Institute of Computer Science, AGH University of Krakow, al. Adama Mickiewicza 30, Krakow, Poland"],"raw_orcid":"https://orcid.org/0000-0001-8104-7828","affiliations":[{"raw_affiliation_string":"Institute of Computer Science, AGH University of Krakow, Kraków, Poland","institution_ids":["https://openalex.org/I686019","https://openalex.org/I4210087266"]},{"raw_affiliation_string":"Institute of Computer Science, AGH University of Krakow, al. Adama Mickiewicza 30, Krakow, Poland","institution_ids":["https://openalex.org/I126596746","https://openalex.org/I686019","https://openalex.org/I4210087266"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102852398","display_name":"Jacek Tarasiuk","orcid":"https://orcid.org/0000-0002-6263-0740"},"institutions":[{"id":"https://openalex.org/I126596746","display_name":"Jagiellonian University","ror":"https://ror.org/03bqmcz70","country_code":"PL","type":"education","lineage":["https://openalex.org/I126596746"]},{"id":"https://openalex.org/I686019","display_name":"AGH University of Krakow","ror":"https://ror.org/00bas1c41","country_code":"PL","type":"education","lineage":["https://openalex.org/I686019"]}],"countries":["PL"],"is_corresponding":false,"raw_author_name":"Jacek Tarasiuk","raw_affiliation_strings":["Department of Condensed Matter Physics, AGH University of Krakow, Kraków, Poland","Department of Condensed Matter Physics, AGH University of Krakow, al. Mickiewicza 30, Cracow, Poland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Condensed Matter Physics, AGH University of Krakow, Kraków, Poland","institution_ids":["https://openalex.org/I686019"]},{"raw_affiliation_string":"Department of Condensed Matter Physics, AGH University of Krakow, al. Mickiewicza 30, Cracow, Poland","institution_ids":["https://openalex.org/I126596746","https://openalex.org/I686019"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5023110709","display_name":"Janusz Skrzat","orcid":"https://orcid.org/0000-0003-0587-018X"},"institutions":[{"id":"https://openalex.org/I126596746","display_name":"Jagiellonian University","ror":"https://ror.org/03bqmcz70","country_code":"PL","type":"education","lineage":["https://openalex.org/I126596746"]}],"countries":["PL"],"is_corresponding":false,"raw_author_name":"Janusz Skrzat","raw_affiliation_strings":["Department of Anatomy, Jagiellonian University Medical College, Kraków, Poland","Department of Anatomy, Jagiellonian University Medical College, ul. Kopernika 12, Cracow, Poland"],"raw_orcid":"https://orcid.org/0000-0003-0587-018X","affiliations":[{"raw_affiliation_string":"Department of Anatomy, Jagiellonian University Medical College, Kraków, Poland","institution_ids":["https://openalex.org/I126596746"]},{"raw_affiliation_string":"Department of Anatomy, Jagiellonian University Medical College, ul. Kopernika 12, Cracow, Poland","institution_ids":["https://openalex.org/I126596746"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":1850,"currency":"USD","value_usd":1850},"apc_paid":{"value":1850,"currency":"USD","value_usd":1850},"fwci":1.2668,"has_fulltext":false,"cited_by_count":3,"citation_normalized_percentile":{"value":0.76239801,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":96,"max":97},"biblio":{"volume":"13","issue":null,"first_page":"26798","last_page":"26817"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T13752","display_name":"Mechanics and Biomechanics Studies","score":0.3102000057697296,"subfield":{"id":"https://openalex.org/subfields/2204","display_name":"Biomedical Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T13752","display_name":"Mechanics and Biomechanics Studies","score":0.3102000057697296,"subfield":{"id":"https://openalex.org/subfields/2204","display_name":"Biomedical Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7439526915550232}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7439526915550232}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1109/access.2025.3539837","is_oa":true,"landing_page_url":"https://doi.org/10.1109/access.2025.3539837","pdf_url":null,"source":{"id":"https://openalex.org/S2485537415","display_name":"IEEE Access","issn_l":"2169-3536","issn":["2169-3536"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Access","raw_type":"journal-article"},{"id":"pmh:oai:doaj.org/article:ee75fcee8ffd4912abdbac0f32e5eae4","is_oa":true,"landing_page_url":"https://doaj.org/article/ee75fcee8ffd4912abdbac0f32e5eae4","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"IEEE Access, Vol 13, Pp 26798-26817 (2025)","raw_type":"article"},{"id":"pmh:oai:ruj.uj.edu.pl:item/548421","is_oa":true,"landing_page_url":"https://ieeexplore.ieee.org/document/10877796","pdf_url":null,"source":{"id":"https://openalex.org/S4306401249","display_name":"Jagiellonian University Repository (Jagiellonian University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I126596746","host_organization_name":"Jagiellonian University","host_organization_lineage":["https://openalex.org/I126596746"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"info:eu-repo/semantics/article"}],"best_oa_location":{"id":"doi:10.1109/access.2025.3539837","is_oa":true,"landing_page_url":"https://doi.org/10.1109/access.2025.3539837","pdf_url":null,"source":{"id":"https://openalex.org/S2485537415","display_name":"IEEE Access","issn_l":"2169-3536","issn":["2169-3536"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Access","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G4641875235","display_name":null,"funder_award_id":"NCN PRELUDIUM 2016/21/N/ST7/02351","funder_id":"https://openalex.org/F4320322511","funder_display_name":"Narodowe Centrum Nauki"}],"funders":[{"id":"https://openalex.org/F4320322511","display_name":"Narodowe Centrum Nauki","ror":"https://ror.org/03ha2q922"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":17,"referenced_works":["https://openalex.org/W1970928383","https://openalex.org/W2036036384","https://openalex.org/W2074109931","https://openalex.org/W2113576511","https://openalex.org/W2133287637","https://openalex.org/W2136145485","https://openalex.org/W2148347694","https://openalex.org/W2157380596","https://openalex.org/W2157812230","https://openalex.org/W2170167891","https://openalex.org/W2891631795","https://openalex.org/W4387354583","https://openalex.org/W4392203593","https://openalex.org/W4392449718","https://openalex.org/W4399923772","https://openalex.org/W6809735966","https://openalex.org/W6858892204"],"related_works":["https://openalex.org/W4391375266","https://openalex.org/W2899084033","https://openalex.org/W2748952813","https://openalex.org/W2390279801","https://openalex.org/W4391913857","https://openalex.org/W2358668433","https://openalex.org/W4396701345","https://openalex.org/W2376932109","https://openalex.org/W2001405890","https://openalex.org/W4396696052"],"abstract_inverted_index":{"Accurate":[0],"morphological":[1,200],"and":[2,17,43,110,170,201],"topological":[3,202],"analysis":[4,193,229],"of":[5,24,52,60,66,84,172,213,230],"renal":[6,25,86,101],"vascular":[7,13,26,102,152,192,206],"trees":[8],"is":[9,49],"crucial":[10],"for":[11,133,190,198,224],"understanding":[12],"architecture,":[14],"detecting":[15],"patterns,":[16],"identifying":[18],"pathological":[19],"deviations.":[20],"However,":[21],"the":[22,50,58,64,81,85,131,140,146,150,155,162,168,182,211,228],"complexity":[23],"trees,":[27],"particularly":[28],"in":[29,39,63,134,181,204,216],"corrosive":[30],"endocasts,":[31],"requires":[32],"custom-designed":[33],"algorithms":[34],"to":[35,56,71,80,144],"address":[36,89],"unique":[37],"challenges":[38],"reconstruction,":[40],"segmentation,":[41],"skeletonization,":[42],"graph-based":[44],"representation.":[45],"A":[46],"key":[47],"issue":[48],"lack":[51],"a":[53,67,94,187,196,221],"direct":[54],"method":[55],"validate":[57],"correctness":[59],"these":[61],"parameters":[62,153],"absence":[65],"ground":[68],"truth":[69],"prior":[70],"pattern":[72],"analysis,":[73],"with":[74,154,175],"manual":[75],"validation":[76,96,177],"being":[77],"infeasible":[78],"due":[79],"intricate":[82],"nature":[83],"vasculature.":[87],"To":[88],"this":[90],"challenge,":[91],"we":[92],"introduce":[93],"systematic":[95],"framework":[97],"utilizing":[98],"artificially":[99],"generated":[100],"models.":[103],"We":[104,137],"developed":[105],"computational":[106,142,163],"models":[107,117,215],"using":[108,120],"L-systems":[109],"fabricated":[111],"them":[112],"via":[113],"3D":[114],"printing.":[115],"These":[116],"were":[118],"scanned":[119],"microcomputed":[121],"tomography":[122],"(":[125],"$\\mu":[127],"$":[128],"-CT),":[129],"simulating":[130],"process":[132],"vivo":[135],"endocasts.":[136],"then":[138],"applied":[139],"same":[141],"pipeline":[143],"analyze":[145],"synthetic":[147,214],"models,":[148,174],"comparing":[149],"derived":[151],"known":[156],"geometries.":[157],"Our":[158],"results":[159],"demonstrate":[160],"that":[161],"methods":[164],"can":[165],"accurately":[166],"replicate":[167],"morphology":[169],"topology":[171],"artificial":[173],"quantified":[176],"showing":[178],"high":[179],"precision":[180],"analysis.":[183],"This":[184],"approach":[185],"provides":[186],"reliable":[188],"methodology":[189],"validating":[191],"algorithms,":[194],"setting":[195],"benchmark":[197],"accurate":[199],"assessments":[203],"complex":[205,231],"networks.":[207],"It":[208],"also":[209],"highlights":[210],"value":[212],"verifying":[217],"algorithm":[218],"integrity,":[219],"offering":[220],"solid":[222],"foundation":[223],"future":[225],"research":[226],"on":[227],"anatomical":[232],"structures.":[233]},"counts_by_year":[{"year":2025,"cited_by_count":3}],"updated_date":"2026-03-27T05:58:40.876381","created_date":"2025-10-10T00:00:00"}