{"id":"https://openalex.org/W4403826764","doi":"https://doi.org/10.1109/access.2024.3487552","title":"Local-Global Graph Fusion to Enhance scRNA-Seq Clustering","display_name":"Local-Global Graph Fusion to Enhance scRNA-Seq Clustering","publication_year":2024,"publication_date":"2024-01-01","ids":{"openalex":"https://openalex.org/W4403826764","doi":"https://doi.org/10.1109/access.2024.3487552"},"language":"en","primary_location":{"id":"doi:10.1109/access.2024.3487552","is_oa":true,"landing_page_url":"https://doi.org/10.1109/access.2024.3487552","pdf_url":null,"source":{"id":"https://openalex.org/S2485537415","display_name":"IEEE Access","issn_l":"2169-3536","issn":["2169-3536"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Access","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.1109/access.2024.3487552","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5037079180","display_name":"Lin Du","orcid":"https://orcid.org/0000-0003-4584-6571"},"institutions":[{"id":"https://openalex.org/I4210097715","display_name":"Qilu Normal University","ror":"https://ror.org/00wztsq19","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210097715"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Lin Du","raw_affiliation_strings":["School of Information Sciences and Engineering, Qilu Normal University, Zhangqiu, Jinan, Shandong, China","School of Information Sciences and Engineering, Qilu Normal University, Wenbo Road, Zhangqiu District, Jinan, Shandong, China"],"affiliations":[{"raw_affiliation_string":"School of Information Sciences and Engineering, Qilu Normal University, Zhangqiu, Jinan, Shandong, China","institution_ids":["https://openalex.org/I4210097715"]},{"raw_affiliation_string":"School of Information Sciences and Engineering, Qilu Normal University, Wenbo Road, Zhangqiu District, Jinan, Shandong, China","institution_ids":["https://openalex.org/I4210097715"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5059547478","display_name":"Yehong Han","orcid":"https://orcid.org/0000-0003-4991-8819"},"institutions":[{"id":"https://openalex.org/I4210097715","display_name":"Qilu Normal University","ror":"https://ror.org/00wztsq19","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210097715"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yehong Han","raw_affiliation_strings":["School of Information Sciences and Engineering, Qilu Normal University, Zhangqiu, Jinan, Shandong, China","School of Information Sciences and Engineering, Qilu Normal University, Wenbo Road, Zhangqiu District, Jinan, Shandong, China"],"affiliations":[{"raw_affiliation_string":"School of Information Sciences and Engineering, Qilu Normal University, Zhangqiu, Jinan, Shandong, China","institution_ids":["https://openalex.org/I4210097715"]},{"raw_affiliation_string":"School of Information Sciences and Engineering, Qilu Normal University, Wenbo Road, Zhangqiu District, Jinan, Shandong, China","institution_ids":["https://openalex.org/I4210097715"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5037079180"],"corresponding_institution_ids":["https://openalex.org/I4210097715"],"apc_list":{"value":1850,"currency":"USD","value_usd":1850},"apc_paid":{"value":1850,"currency":"USD","value_usd":1850},"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.14372758,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"12","issue":null,"first_page":"165371","last_page":"165383"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10207","display_name":"Advanced biosensing and bioanalysis techniques","score":0.9850000143051147,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10207","display_name":"Advanced biosensing and bioanalysis techniques","score":0.9850000143051147,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10062","display_name":"MicroRNA in disease regulation","score":0.9821000099182129,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9660000205039978,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6478987336158752},{"id":"https://openalex.org/keywords/cluster-analysis","display_name":"Cluster analysis","score":0.6374540328979492},{"id":"https://openalex.org/keywords/fusion","display_name":"Fusion","score":0.4657982289791107},{"id":"https://openalex.org/keywords/graph","display_name":"Graph","score":0.44102874398231506},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.28687188029289246},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.27415892481803894}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6478987336158752},{"id":"https://openalex.org/C73555534","wikidata":"https://www.wikidata.org/wiki/Q622825","display_name":"Cluster analysis","level":2,"score":0.6374540328979492},{"id":"https://openalex.org/C158525013","wikidata":"https://www.wikidata.org/wiki/Q2593739","display_name":"Fusion","level":2,"score":0.4657982289791107},{"id":"https://openalex.org/C132525143","wikidata":"https://www.wikidata.org/wiki/Q141488","display_name":"Graph","level":2,"score":0.44102874398231506},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.28687188029289246},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.27415892481803894},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1109/access.2024.3487552","is_oa":true,"landing_page_url":"https://doi.org/10.1109/access.2024.3487552","pdf_url":null,"source":{"id":"https://openalex.org/S2485537415","display_name":"IEEE Access","issn_l":"2169-3536","issn":["2169-3536"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Access","raw_type":"journal-article"},{"id":"pmh:oai:doaj.org/article:145c9482daad438bb913ac83caea0917","is_oa":true,"landing_page_url":"https://doaj.org/article/145c9482daad438bb913ac83caea0917","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"IEEE Access, Vol 12, Pp 165371-165383 (2024)","raw_type":"article"}],"best_oa_location":{"id":"doi:10.1109/access.2024.3487552","is_oa":true,"landing_page_url":"https://doi.org/10.1109/access.2024.3487552","pdf_url":null,"source":{"id":"https://openalex.org/S2485537415","display_name":"IEEE Access","issn_l":"2169-3536","issn":["2169-3536"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Access","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":43,"referenced_works":["https://openalex.org/W1580018887","https://openalex.org/W1631320694","https://openalex.org/W1965555277","https://openalex.org/W1979283544","https://openalex.org/W2051658465","https://openalex.org/W2068881679","https://openalex.org/W2088252378","https://openalex.org/W2132914434","https://openalex.org/W2526262591","https://openalex.org/W2562003322","https://openalex.org/W2598326928","https://openalex.org/W2794480084","https://openalex.org/W2800392236","https://openalex.org/W2887326710","https://openalex.org/W2894687190","https://openalex.org/W2937917790","https://openalex.org/W2951381561","https://openalex.org/W2952303649","https://openalex.org/W2964015378","https://openalex.org/W3009302866","https://openalex.org/W3022825011","https://openalex.org/W3127011314","https://openalex.org/W3137285774","https://openalex.org/W3138479716","https://openalex.org/W3140605903","https://openalex.org/W3173294575","https://openalex.org/W3186473305","https://openalex.org/W3197239359","https://openalex.org/W3202332579","https://openalex.org/W4210341073","https://openalex.org/W4244030505","https://openalex.org/W4281762365","https://openalex.org/W4283815719","https://openalex.org/W4313423841","https://openalex.org/W4321483896","https://openalex.org/W4388033280","https://openalex.org/W4392562486","https://openalex.org/W4393187479","https://openalex.org/W4396707011","https://openalex.org/W4401315156","https://openalex.org/W6685380521","https://openalex.org/W6730084236","https://openalex.org/W6752378368"],"related_works":["https://openalex.org/W4391375266","https://openalex.org/W2899084033","https://openalex.org/W2748952813","https://openalex.org/W2390279801","https://openalex.org/W4391913857","https://openalex.org/W2358668433","https://openalex.org/W4396701345","https://openalex.org/W2376932109","https://openalex.org/W2001405890","https://openalex.org/W4396696052"],"abstract_inverted_index":{"Single-cell":[0],"RNA":[1],"sequencing":[2],"(scRNA-seq)":[3],"is":[4],"crucial":[5],"for":[6,85,194],"demystifying":[7],"the":[8,15,27,35,42,46,51,89,113,129,137,148,156,168],"cell":[9,19,55,87],"heterogeneity":[10],"and":[11,40,74,99],"differentiation":[12],"processes,":[13],"enabling":[14],"identification":[16,53],"of":[17,26,45,54,133,170],"distinct":[18],"subtypes":[20],"within":[21],"a":[22,66,82,97,191],"population.":[23],"However,":[24],"most":[25],"existing":[28],"approaches":[29],"are":[30,201],"feeble":[31],"to":[32,58,104,111,127,141,146],"comprehensively":[33],"investigate":[34],"interactive":[36],"relationships":[37],"between":[38,109],"cells":[39,110],"exploit":[41],"topological":[43],"structures":[44],"scRNA-seq":[47,68,195],"data,":[48],"resulting":[49],"in":[50],"accurate":[52],"types":[56],"hard":[57],"ploughed.":[59],"In":[60,153],"this":[61,154],"paper,":[62],"we":[63],"propose":[64],"scLGF,":[65],"novel":[67],"deep":[69],"clustering":[70],"model":[71],"with":[72],"Local":[73],"Global":[75],"Graph":[76],"Fusion.":[77],"Specifically,":[78],"scLGF":[79,95,118,171,183],"first":[80],"generates":[81],"latent":[83],"representation":[84,140],"each":[86,162],"using":[88],"dual":[90,149],"embedding":[91,150],"learning":[92,125,151],"module.":[93],"Then,":[94],"introduces":[96],"local":[98],"global":[100],"graph":[101,123],"fusion":[102],"module":[103],"effectively":[105],"capture":[106],"underlying":[107],"connections":[108],"enhance":[112,161],"model\u2019s":[114],"representative":[115],"capabilities.":[116],"Finally,":[117],"proposes":[119],"an":[120],"optimized":[121],"triplet":[122],"self-supervised":[124],"approach":[126],"learn":[128],"discriminative":[130],"feature":[131],"representations":[132],"cells.":[134],"We":[135],"use":[136],"fused":[138],"consensus":[139],"generate":[142],"reliable":[143],"target":[144],"distributions":[145],"supervise":[147],"task.":[152],"way,":[155],"three":[157],"modules":[158],"can":[159],"mutually":[160],"other":[163],"end-to-end.":[164],"Experimental":[165],"results":[166],"demonstrate":[167],"superiority":[169],"over":[172],"six":[173],"alternative":[174],"methods":[175],"on":[176,186],"ten":[177],"widely":[178],"used":[179],"single-cell":[180],"datasets.":[181],"Moreover,":[182],"exhibits":[184],"scalability":[185],"large-scale":[187],"datasets,":[188],"making":[189],"it":[190],"practical":[192],"tool":[193],"data":[196],"analysis.":[197],"The":[198],"source":[199],"codes":[200],"available":[202],"online":[203],"at":[204],"<uri":[205],"xmlns:mml=\"http://www.w3.org/1998/Math/MathML\"":[206],"xmlns:xlink=\"http://www.w3.org/1999/xlink\">https://github.com/lijing2000/scLGF</uri>.":[207]},"counts_by_year":[],"updated_date":"2025-12-21T01:58:51.020947","created_date":"2025-10-10T00:00:00"}
