{"id":"https://openalex.org/W4392902331","doi":"https://doi.org/10.1109/access.2024.3379015","title":"Interactive Deep Learning-Based Retinal OCT Layer Segmentation Refinement by Regressing Translation Maps","display_name":"Interactive Deep Learning-Based Retinal OCT Layer Segmentation Refinement by Regressing Translation Maps","publication_year":2024,"publication_date":"2024-01-01","ids":{"openalex":"https://openalex.org/W4392902331","doi":"https://doi.org/10.1109/access.2024.3379015"},"language":"en","primary_location":{"id":"doi:10.1109/access.2024.3379015","is_oa":true,"landing_page_url":"https://doi.org/10.1109/access.2024.3379015","pdf_url":"https://ieeexplore.ieee.org/ielx7/6287639/6514899/10474349.pdf","source":{"id":"https://openalex.org/S2485537415","display_name":"IEEE Access","issn_l":"2169-3536","issn":["2169-3536"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Access","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://ieeexplore.ieee.org/ielx7/6287639/6514899/10474349.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5061878837","display_name":"Guilherme Aresta","orcid":"https://orcid.org/0000-0002-4225-2156"},"institutions":[{"id":"https://openalex.org/I76134821","display_name":"Medical University of Vienna","ror":"https://ror.org/05n3x4p02","country_code":"AT","type":"education","lineage":["https://openalex.org/I76134821"]}],"countries":["AT"],"is_corresponding":true,"raw_author_name":"Guilherme Aresta","raw_affiliation_strings":["Department of Ophthalmology and Optometry, Christian Doppler Laboratory for Artificial Intelligence in Retina, Medical University of Vienna, Vienna, Austria"],"raw_orcid":"https://orcid.org/0000-0002-4225-2156","affiliations":[{"raw_affiliation_string":"Department of Ophthalmology and Optometry, Christian Doppler Laboratory for Artificial Intelligence in Retina, Medical University of Vienna, Vienna, Austria","institution_ids":["https://openalex.org/I76134821"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5079021497","display_name":"Teresa Ara\u00fajo","orcid":"https://orcid.org/0000-0001-9687-528X"},"institutions":[{"id":"https://openalex.org/I76134821","display_name":"Medical University of Vienna","ror":"https://ror.org/05n3x4p02","country_code":"AT","type":"education","lineage":["https://openalex.org/I76134821"]}],"countries":["AT"],"is_corresponding":false,"raw_author_name":"Teresa Ara\u00fajo","raw_affiliation_strings":["Department of Ophthalmology and Optometry, Christian Doppler Laboratory for Artificial Intelligence in Retina, Medical University of Vienna, Vienna, Austria"],"raw_orcid":"https://orcid.org/0000-0001-9687-528X","affiliations":[{"raw_affiliation_string":"Department of Ophthalmology and Optometry, Christian Doppler Laboratory for Artificial Intelligence in Retina, Medical University of Vienna, Vienna, Austria","institution_ids":["https://openalex.org/I76134821"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5002486652","display_name":"Botond Fazekas","orcid":"https://orcid.org/0000-0001-6158-2612"},"institutions":[{"id":"https://openalex.org/I76134821","display_name":"Medical University of Vienna","ror":"https://ror.org/05n3x4p02","country_code":"AT","type":"education","lineage":["https://openalex.org/I76134821"]}],"countries":["AT"],"is_corresponding":false,"raw_author_name":"Botond Fazekas","raw_affiliation_strings":["Department of Ophthalmology and Optometry, Christian Doppler Laboratory for Artificial Intelligence in Retina, Medical University of Vienna, Vienna, Austria"],"raw_orcid":"https://orcid.org/0000-0001-6158-2612","affiliations":[{"raw_affiliation_string":"Department of Ophthalmology and Optometry, Christian Doppler Laboratory for Artificial Intelligence in Retina, Medical University of Vienna, Vienna, Austria","institution_ids":["https://openalex.org/I76134821"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5058738262","display_name":"Julia Mai","orcid":"https://orcid.org/0000-0002-0528-9742"},"institutions":[{"id":"https://openalex.org/I76134821","display_name":"Medical University of Vienna","ror":"https://ror.org/05n3x4p02","country_code":"AT","type":"education","lineage":["https://openalex.org/I76134821"]}],"countries":["AT"],"is_corresponding":false,"raw_author_name":"Julia Mai","raw_affiliation_strings":["Department of Ophthalmology and Optometry, Christian Doppler Laboratory for Artificial Intelligence in Retina, Medical University of Vienna, Vienna, Austria"],"raw_orcid":"https://orcid.org/0000-0002-0528-9742","affiliations":[{"raw_affiliation_string":"Department of Ophthalmology and Optometry, Christian Doppler Laboratory for Artificial Intelligence in Retina, Medical University of Vienna, Vienna, Austria","institution_ids":["https://openalex.org/I76134821"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5053563726","display_name":"Ursula Schmidt\u2010Erfurth","orcid":"https://orcid.org/0000-0002-7788-7311"},"institutions":[{"id":"https://openalex.org/I76134821","display_name":"Medical University of Vienna","ror":"https://ror.org/05n3x4p02","country_code":"AT","type":"education","lineage":["https://openalex.org/I76134821"]}],"countries":["AT"],"is_corresponding":false,"raw_author_name":"Ursula Schmidt-Erfurth","raw_affiliation_strings":["Department of Ophthalmology and Optometry, Christian Doppler Laboratory for Artificial Intelligence in Retina, Medical University of Vienna, Vienna, Austria"],"raw_orcid":"https://orcid.org/0000-0002-7788-7311","affiliations":[{"raw_affiliation_string":"Department of Ophthalmology and Optometry, Christian Doppler Laboratory for Artificial Intelligence in Retina, Medical University of Vienna, Vienna, Austria","institution_ids":["https://openalex.org/I76134821"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5089575197","display_name":"Hrvoje Bogunovi\u0107","orcid":"https://orcid.org/0000-0002-9168-0894"},"institutions":[{"id":"https://openalex.org/I76134821","display_name":"Medical University of Vienna","ror":"https://ror.org/05n3x4p02","country_code":"AT","type":"education","lineage":["https://openalex.org/I76134821"]}],"countries":["AT"],"is_corresponding":false,"raw_author_name":"Hrvoje Bogunovi\u0107","raw_affiliation_strings":["Department of Ophthalmology and Optometry, Christian Doppler Laboratory for Artificial Intelligence in Retina, Medical University of Vienna, Vienna, Austria"],"raw_orcid":"https://orcid.org/0000-0002-9168-0894","affiliations":[{"raw_affiliation_string":"Department of Ophthalmology and Optometry, Christian Doppler Laboratory for Artificial Intelligence in Retina, Medical University of Vienna, Vienna, Austria","institution_ids":["https://openalex.org/I76134821"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5061878837"],"corresponding_institution_ids":["https://openalex.org/I76134821"],"apc_list":{"value":1850,"currency":"USD","value_usd":1850},"apc_paid":{"value":1850,"currency":"USD","value_usd":1850},"fwci":1.5661,"has_fulltext":true,"cited_by_count":4,"citation_normalized_percentile":{"value":0.81972329,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":97},"biblio":{"volume":"12","issue":null,"first_page":"47009","last_page":"47023"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11438","display_name":"Retinal Imaging and Analysis","score":1.0,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T11438","display_name":"Retinal Imaging and Analysis","score":1.0,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10862","display_name":"AI in cancer detection","score":0.9919999837875366,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11569","display_name":"Optical Coherence Tomography Applications","score":0.9882000088691711,"subfield":{"id":"https://openalex.org/subfields/2204","display_name":"Biomedical Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8460466861724854},{"id":"https://openalex.org/keywords/segmentation","display_name":"Segmentation","score":0.8332728147506714},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.740246057510376},{"id":"https://openalex.org/keywords/deep-learning","display_name":"Deep learning","score":0.6901254653930664},{"id":"https://openalex.org/keywords/translation","display_name":"Translation (biology)","score":0.6083123087882996},{"id":"https://openalex.org/keywords/image-segmentation","display_name":"Image segmentation","score":0.501554012298584},{"id":"https://openalex.org/keywords/optical-coherence-tomography","display_name":"Optical coherence tomography","score":0.46551039814949036},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.4560934603214264},{"id":"https://openalex.org/keywords/scale-space-segmentation","display_name":"Scale-space segmentation","score":0.43745267391204834},{"id":"https://openalex.org/keywords/computer-vision","display_name":"Computer vision","score":0.4327990710735321}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8460466861724854},{"id":"https://openalex.org/C89600930","wikidata":"https://www.wikidata.org/wiki/Q1423946","display_name":"Segmentation","level":2,"score":0.8332728147506714},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.740246057510376},{"id":"https://openalex.org/C108583219","wikidata":"https://www.wikidata.org/wiki/Q197536","display_name":"Deep learning","level":2,"score":0.6901254653930664},{"id":"https://openalex.org/C149364088","wikidata":"https://www.wikidata.org/wiki/Q185917","display_name":"Translation (biology)","level":4,"score":0.6083123087882996},{"id":"https://openalex.org/C124504099","wikidata":"https://www.wikidata.org/wiki/Q56933","display_name":"Image segmentation","level":3,"score":0.501554012298584},{"id":"https://openalex.org/C2778818243","wikidata":"https://www.wikidata.org/wiki/Q899552","display_name":"Optical coherence tomography","level":2,"score":0.46551039814949036},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.4560934603214264},{"id":"https://openalex.org/C65885262","wikidata":"https://www.wikidata.org/wiki/Q7429708","display_name":"Scale-space segmentation","level":4,"score":0.43745267391204834},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.4327990710735321},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C105580179","wikidata":"https://www.wikidata.org/wiki/Q188928","display_name":"Messenger RNA","level":3,"score":0.0},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.0},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.0},{"id":"https://openalex.org/C118487528","wikidata":"https://www.wikidata.org/wiki/Q161437","display_name":"Ophthalmology","level":1,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1109/access.2024.3379015","is_oa":true,"landing_page_url":"https://doi.org/10.1109/access.2024.3379015","pdf_url":"https://ieeexplore.ieee.org/ielx7/6287639/6514899/10474349.pdf","source":{"id":"https://openalex.org/S2485537415","display_name":"IEEE Access","issn_l":"2169-3536","issn":["2169-3536"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Access","raw_type":"journal-article"},{"id":"pmh:oai:doaj.org/article:161ff49ab7cd4932aad17da0f4712e99","is_oa":true,"landing_page_url":"https://doaj.org/article/161ff49ab7cd4932aad17da0f4712e99","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"IEEE Access, Vol 12, Pp 47009-47023 (2024)","raw_type":"article"}],"best_oa_location":{"id":"doi:10.1109/access.2024.3379015","is_oa":true,"landing_page_url":"https://doi.org/10.1109/access.2024.3379015","pdf_url":"https://ieeexplore.ieee.org/ielx7/6287639/6514899/10474349.pdf","source":{"id":"https://openalex.org/S2485537415","display_name":"IEEE Access","issn_l":"2169-3536","issn":["2169-3536"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Access","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320311813","display_name":"\u00d6sterreichische Nationalstiftung f\u00fcr Forschung, Technologie und Entwicklung","ror":"https://ror.org/04hb33h70"},{"id":"https://openalex.org/F4320323591","display_name":"Christian Doppler Forschungsgesellschaft","ror":"https://ror.org/00mv8h305"},{"id":"https://openalex.org/F4320327593","display_name":"Bundesministerium f\u00fcr Digitalisierung und Wirtschaftsstandort","ror":null}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4392902331.pdf","grobid_xml":"https://content.openalex.org/works/W4392902331.grobid-xml"},"referenced_works_count":51,"referenced_works":["https://openalex.org/W2046033161","https://openalex.org/W2074598933","https://openalex.org/W2122237804","https://openalex.org/W2463489988","https://openalex.org/W2549799826","https://openalex.org/W2587590794","https://openalex.org/W2592517646","https://openalex.org/W2592929672","https://openalex.org/W2606534623","https://openalex.org/W2608854843","https://openalex.org/W2609825896","https://openalex.org/W2732931556","https://openalex.org/W2752006103","https://openalex.org/W2763160469","https://openalex.org/W2763916104","https://openalex.org/W2774320778","https://openalex.org/W2776163999","https://openalex.org/W2898575988","https://openalex.org/W2907465751","https://openalex.org/W2948553897","https://openalex.org/W2954734606","https://openalex.org/W2967694144","https://openalex.org/W2971013993","https://openalex.org/W2977942577","https://openalex.org/W2979394918","https://openalex.org/W2981415145","https://openalex.org/W3006354677","https://openalex.org/W3010908644","https://openalex.org/W3034278117","https://openalex.org/W3034586976","https://openalex.org/W3035127651","https://openalex.org/W3035709993","https://openalex.org/W3036782889","https://openalex.org/W3040784645","https://openalex.org/W3092762369","https://openalex.org/W3136054725","https://openalex.org/W3159178846","https://openalex.org/W3165089693","https://openalex.org/W3173305813","https://openalex.org/W3196343085","https://openalex.org/W3202263958","https://openalex.org/W3202641951","https://openalex.org/W3214673625","https://openalex.org/W4295934721","https://openalex.org/W4378965538","https://openalex.org/W4390874575","https://openalex.org/W4391069643","https://openalex.org/W4391109864","https://openalex.org/W4391685882","https://openalex.org/W6774415586","https://openalex.org/W6795941180"],"related_works":["https://openalex.org/W4308993413","https://openalex.org/W2185902295","https://openalex.org/W2103507220","https://openalex.org/W3144569342","https://openalex.org/W2945274617","https://openalex.org/W4313052709","https://openalex.org/W4205800335","https://openalex.org/W2055202857","https://openalex.org/W2022929107","https://openalex.org/W80586315"],"abstract_inverted_index":{"Retinal":[0],"layer":[1,57,85],"segmentation":[2,58,66,106,128],"in":[3,43],"optical":[4],"coherence":[5],"tomography":[6],"(OCT)":[7],"is":[8,31,101],"essential":[9],"for":[10,25,37,48,95,105,155],"the":[11,19,44,49,80,96,115],"diagnosis":[12],"and":[13,143,158],"follow-up":[14],"of":[15,21,126],"several":[16],"diseases.":[17],"Despite":[18],"success":[20],"deep":[22,76],"learning":[23],"approaches":[24],"this":[26],"task,":[27],"their":[28],"clinical":[29],"applicability":[30],"limited,":[32],"since":[33],"they":[34],"neither":[35],"account":[36,94],"pathologies":[38],"other":[39],"than":[40],"those":[41,73],"present":[42],"training":[45],"set":[46],"nor":[47],"specialists\u2019":[50],"subjectivity.":[51],"Thus,":[52],"we":[53],"propose":[54],"an":[55,64],"interactive":[56],"approach":[59,78,139],"that":[60,93,130],"allows":[61],"to":[62,70,83,103,122],"obtain":[63],"initial":[65],"and,":[67],"more":[68],"importantly,":[69],"interactively":[71],"correct":[72,84],"segmentations.":[74],"Our":[75],"learning-based":[77],"predicts":[79],"translation":[81,91],"required":[82],"boundary":[86],"segmentations":[87],"by":[88,108],"regressing":[89],"pixel-wise":[90],"maps":[92],"user":[97,133,160],"input.":[98],"The":[99],"method":[100],"designed":[102],"allow":[104],"correction":[107],"interactions":[109],"with":[110,146],"point-clicks":[111],"or":[112],"line-scribbles.":[113],"Additionally,":[114],"system":[116],"outputs":[117],"a":[118,156],"coordinate-wise":[119],"confidence,":[120],"allowing":[121,154],"automatically":[123],"identify":[124],"regions":[125],"possible":[127],"failure":[129],"may":[131],"require":[132],"attention.":[134],"We":[135],"extensively":[136],"validate":[137],"our":[138],"on":[140],"multiple":[141],"private":[142],"public":[144],"datasets":[145],"different":[147],"pathomorphological":[148],"complexities,":[149],"achieving":[150],"state-of-the-art":[151],"performance,":[152],"while":[153],"simple":[157],"efficient":[159],"interaction.":[161]},"counts_by_year":[{"year":2025,"cited_by_count":3},{"year":2024,"cited_by_count":1}],"updated_date":"2026-05-06T08:25:59.206177","created_date":"2025-10-10T00:00:00"}
