{"id":"https://openalex.org/W4384787188","doi":"https://doi.org/10.1109/access.2023.3296474","title":"Progressively Helical Multi-Omics Data Fusion GCN and Its Application in Lung Adenocarcinoma","display_name":"Progressively Helical Multi-Omics Data Fusion GCN and Its Application in Lung Adenocarcinoma","publication_year":2023,"publication_date":"2023-01-01","ids":{"openalex":"https://openalex.org/W4384787188","doi":"https://doi.org/10.1109/access.2023.3296474"},"language":"en","primary_location":{"id":"doi:10.1109/access.2023.3296474","is_oa":true,"landing_page_url":"https://doi.org/10.1109/access.2023.3296474","pdf_url":"https://ieeexplore.ieee.org/ielx7/6287639/6514899/10185917.pdf","source":{"id":"https://openalex.org/S2485537415","display_name":"IEEE Access","issn_l":"2169-3536","issn":["2169-3536"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Access","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://ieeexplore.ieee.org/ielx7/6287639/6514899/10185917.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5101613871","display_name":"Junxuan Zhu","orcid":"https://orcid.org/0000-0002-7956-1569"},"institutions":[{"id":"https://openalex.org/I162868743","display_name":"Tianjin University","ror":"https://ror.org/012tb2g32","country_code":"CN","type":"education","lineage":["https://openalex.org/I162868743"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Junxuan Zhu","raw_affiliation_strings":["School of Chemical Engineering and Technology, Tianjin University, Tianjin, China","School of Chemical Engineering and Technology, Tianjin University, Tianjin, P.R. China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Chemical Engineering and Technology, Tianjin University, Tianjin, China","institution_ids":["https://openalex.org/I162868743"]},{"raw_affiliation_string":"School of Chemical Engineering and Technology, Tianjin University, Tianjin, P.R. China","institution_ids":["https://openalex.org/I162868743"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5045217770","display_name":"Jinhan Zhang","orcid":"https://orcid.org/0000-0002-4511-8358"},"institutions":[{"id":"https://openalex.org/I162868743","display_name":"Tianjin University","ror":"https://ror.org/012tb2g32","country_code":"CN","type":"education","lineage":["https://openalex.org/I162868743"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jinhan Zhang","raw_affiliation_strings":["School of Chemical Engineering and Technology, Tianjin University, Tianjin, China","School of Chemical Engineering and Technology, Tianjin University, Tianjin, P.R. China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Chemical Engineering and Technology, Tianjin University, Tianjin, China","institution_ids":["https://openalex.org/I162868743"]},{"raw_affiliation_string":"School of Chemical Engineering and Technology, Tianjin University, Tianjin, P.R. China","institution_ids":["https://openalex.org/I162868743"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5008002092","display_name":"Liyan Wang","orcid":"https://orcid.org/0009-0005-8437-4687"},"institutions":[{"id":"https://openalex.org/I162868743","display_name":"Tianjin University","ror":"https://ror.org/012tb2g32","country_code":"CN","type":"education","lineage":["https://openalex.org/I162868743"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Liyan Wang","raw_affiliation_strings":["School of Chemical Engineering and Technology, Tianjin University, Tianjin, China","School of Chemical Engineering and Technology, Tianjin University, Tianjin, P.R. China"],"raw_orcid":"https://orcid.org/0009-0005-8437-4687","affiliations":[{"raw_affiliation_string":"School of Chemical Engineering and Technology, Tianjin University, Tianjin, China","institution_ids":["https://openalex.org/I162868743"]},{"raw_affiliation_string":"School of Chemical Engineering and Technology, Tianjin University, Tianjin, P.R. China","institution_ids":["https://openalex.org/I162868743"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101838858","display_name":"Hao Huang","orcid":"https://orcid.org/0000-0001-8783-0928"},"institutions":[{"id":"https://openalex.org/I162868743","display_name":"Tianjin University","ror":"https://ror.org/012tb2g32","country_code":"CN","type":"education","lineage":["https://openalex.org/I162868743"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Hao Huang","raw_affiliation_strings":["School of Chemical Engineering and Technology, Tianjin University, Tianjin, China","School of Chemical Engineering and Technology, Tianjin University, Tianjin, P.R. China"],"raw_orcid":"https://orcid.org/0000-0001-8783-0928","affiliations":[{"raw_affiliation_string":"School of Chemical Engineering and Technology, Tianjin University, Tianjin, China","institution_ids":["https://openalex.org/I162868743"]},{"raw_affiliation_string":"School of Chemical Engineering and Technology, Tianjin University, Tianjin, P.R. China","institution_ids":["https://openalex.org/I162868743"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100433032","display_name":"Zhibo Zhang","orcid":"https://orcid.org/0009-0007-4563-9413"},"institutions":[{"id":"https://openalex.org/I4210142182","display_name":"Tianjin Hospital","ror":"https://ror.org/04j9yn198","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210142182"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zhibo Zhang","raw_affiliation_strings":["Tianjin Hospital, Tianjin, China","Tianjin Hospital, Tianjin, P.R. China"],"raw_orcid":"https://orcid.org/0009-0007-4563-9413","affiliations":[{"raw_affiliation_string":"Tianjin Hospital, Tianjin, China","institution_ids":["https://openalex.org/I4210142182"]},{"raw_affiliation_string":"Tianjin Hospital, Tianjin, P.R. China","institution_ids":["https://openalex.org/I4210142182"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5070125855","display_name":"Kai Song","orcid":"https://orcid.org/0000-0001-9195-6160"},"institutions":[{"id":"https://openalex.org/I162868743","display_name":"Tianjin University","ror":"https://ror.org/012tb2g32","country_code":"CN","type":"education","lineage":["https://openalex.org/I162868743"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Kai Song","raw_affiliation_strings":["School of Chemical Engineering and Technology, Tianjin University, Tianjin, China","School of Chemical Engineering and Technology, Tianjin University, Tianjin, P.R. China","Frontiers Science Center for Synthetic Biology and Key Laboratory of Systems Bioengineering (Ministry of Education), Tianjin University, Tianjin, PR China"],"raw_orcid":"https://orcid.org/0000-0001-9195-6160","affiliations":[{"raw_affiliation_string":"School of Chemical Engineering and Technology, Tianjin University, Tianjin, China","institution_ids":["https://openalex.org/I162868743"]},{"raw_affiliation_string":"School of Chemical Engineering and Technology, Tianjin University, Tianjin, P.R. China","institution_ids":["https://openalex.org/I162868743"]},{"raw_affiliation_string":"Frontiers Science Center for Synthetic Biology and Key Laboratory of Systems Bioengineering (Ministry of Education), Tianjin University, Tianjin, PR China","institution_ids":["https://openalex.org/I162868743"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5100447033","display_name":"Xiaofei Zhang","orcid":"https://orcid.org/0000-0001-8090-1201"},"institutions":[{"id":"https://openalex.org/I4210142182","display_name":"Tianjin Hospital","ror":"https://ror.org/04j9yn198","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210142182"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xiaofei Zhang","raw_affiliation_strings":["Tianjin Hospital, Tianjin, China","Tianjin Hospital, Tianjin, P.R. China"],"raw_orcid":"https://orcid.org/0000-0001-8090-1201","affiliations":[{"raw_affiliation_string":"Tianjin Hospital, Tianjin, China","institution_ids":["https://openalex.org/I4210142182"]},{"raw_affiliation_string":"Tianjin Hospital, Tianjin, P.R. China","institution_ids":["https://openalex.org/I4210142182"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5101613871"],"corresponding_institution_ids":["https://openalex.org/I162868743"],"apc_list":{"value":1850,"currency":"USD","value_usd":1850},"apc_paid":{"value":1850,"currency":"USD","value_usd":1850},"fwci":0.593,"has_fulltext":true,"cited_by_count":4,"citation_normalized_percentile":{"value":0.69651537,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":97},"biblio":{"volume":"11","issue":null,"first_page":"73568","last_page":"73582"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11297","display_name":"Ferroptosis and cancer prognosis","score":0.9975000023841858,"subfield":{"id":"https://openalex.org/subfields/2740","display_name":"Pulmonary and Respiratory Medicine"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9968000054359436,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/omics","display_name":"Omics","score":0.6634213328361511},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5738197565078735},{"id":"https://openalex.org/keywords/data-integration","display_name":"Data integration","score":0.4655511975288391},{"id":"https://openalex.org/keywords/sensor-fusion","display_name":"Sensor fusion","score":0.4562491178512573},{"id":"https://openalex.org/keywords/graph","display_name":"Graph","score":0.45022720098495483},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.41779959201812744},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.37662628293037415},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.3346370458602905},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.3256688117980957},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.2571009397506714},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.09890645742416382}],"concepts":[{"id":"https://openalex.org/C157585117","wikidata":"https://www.wikidata.org/wiki/Q158666","display_name":"Omics","level":2,"score":0.6634213328361511},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5738197565078735},{"id":"https://openalex.org/C72634772","wikidata":"https://www.wikidata.org/wiki/Q386824","display_name":"Data integration","level":2,"score":0.4655511975288391},{"id":"https://openalex.org/C33954974","wikidata":"https://www.wikidata.org/wiki/Q486494","display_name":"Sensor fusion","level":2,"score":0.4562491178512573},{"id":"https://openalex.org/C132525143","wikidata":"https://www.wikidata.org/wiki/Q141488","display_name":"Graph","level":2,"score":0.45022720098495483},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.41779959201812744},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.37662628293037415},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.3346370458602905},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.3256688117980957},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.2571009397506714},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.09890645742416382}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1109/access.2023.3296474","is_oa":true,"landing_page_url":"https://doi.org/10.1109/access.2023.3296474","pdf_url":"https://ieeexplore.ieee.org/ielx7/6287639/6514899/10185917.pdf","source":{"id":"https://openalex.org/S2485537415","display_name":"IEEE Access","issn_l":"2169-3536","issn":["2169-3536"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Access","raw_type":"journal-article"},{"id":"pmh:oai:doaj.org/article:ce0a9e4973ab492aa1408e08ac9c9af5","is_oa":true,"landing_page_url":"https://doaj.org/article/ce0a9e4973ab492aa1408e08ac9c9af5","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"IEEE Access, Vol 11, Pp 73568-73582 (2023)","raw_type":"article"}],"best_oa_location":{"id":"doi:10.1109/access.2023.3296474","is_oa":true,"landing_page_url":"https://doi.org/10.1109/access.2023.3296474","pdf_url":"https://ieeexplore.ieee.org/ielx7/6287639/6514899/10185917.pdf","source":{"id":"https://openalex.org/S2485537415","display_name":"IEEE Access","issn_l":"2169-3536","issn":["2169-3536"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Access","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G2682886822","display_name":null,"funder_award_id":"2022YFC3004502","funder_id":"https://openalex.org/F4320335777","funder_display_name":"National Key Research and Development Program of China"}],"funders":[{"id":"https://openalex.org/F4320321540","display_name":"Ministry of Science and Technology of the People's Republic of China","ror":"https://ror.org/027s68j25"},{"id":"https://openalex.org/F4320335777","display_name":"National Key Research and Development Program of China","ror":null}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4384787188.pdf","grobid_xml":"https://content.openalex.org/works/W4384787188.grobid-xml"},"referenced_works_count":65,"referenced_works":["https://openalex.org/W1773463278","https://openalex.org/W1927177123","https://openalex.org/W1987219048","https://openalex.org/W2065822237","https://openalex.org/W2094189284","https://openalex.org/W2123794412","https://openalex.org/W2130410032","https://openalex.org/W2149360212","https://openalex.org/W2161289668","https://openalex.org/W2175370850","https://openalex.org/W2218566206","https://openalex.org/W2292492942","https://openalex.org/W2420408268","https://openalex.org/W2525040213","https://openalex.org/W2624701078","https://openalex.org/W2733047156","https://openalex.org/W2782454362","https://openalex.org/W2807017833","https://openalex.org/W2895654791","https://openalex.org/W2916106175","https://openalex.org/W2924119339","https://openalex.org/W2950878899","https://openalex.org/W2951531839","https://openalex.org/W2962876161","https://openalex.org/W2974168146","https://openalex.org/W2977218961","https://openalex.org/W2979761477","https://openalex.org/W3005644236","https://openalex.org/W3008415901","https://openalex.org/W3017142950","https://openalex.org/W3021662303","https://openalex.org/W3027348990","https://openalex.org/W3042770487","https://openalex.org/W3082655744","https://openalex.org/W3092475696","https://openalex.org/W3093053585","https://openalex.org/W3094521863","https://openalex.org/W3097582316","https://openalex.org/W3099375322","https://openalex.org/W3104826932","https://openalex.org/W3109203717","https://openalex.org/W3119621260","https://openalex.org/W3128443161","https://openalex.org/W3133950705","https://openalex.org/W3137648270","https://openalex.org/W3156270925","https://openalex.org/W3157776042","https://openalex.org/W3170986249","https://openalex.org/W3172179160","https://openalex.org/W3213517155","https://openalex.org/W4205529838","https://openalex.org/W4206059905","https://openalex.org/W4210546025","https://openalex.org/W4210844474","https://openalex.org/W4212958784","https://openalex.org/W4225278475","https://openalex.org/W4286250234","https://openalex.org/W4295312788","https://openalex.org/W4307136583","https://openalex.org/W4307493936","https://openalex.org/W4308831845","https://openalex.org/W4308921673","https://openalex.org/W6760001035","https://openalex.org/W6766978945","https://openalex.org/W6771621015"],"related_works":["https://openalex.org/W2924366642","https://openalex.org/W4392558563","https://openalex.org/W2062592733","https://openalex.org/W3159101980","https://openalex.org/W3173875945","https://openalex.org/W8795902","https://openalex.org/W2966125521","https://openalex.org/W2085627709","https://openalex.org/W2150355991","https://openalex.org/W2381518157"],"abstract_inverted_index":{"Compared":[0],"to":[1,8,56,129],"single-omics":[2],"data,":[3],"utilizing":[4],"multi-omics":[5,28,48],"data":[6,29,49,76],"helps":[7],"gain":[9],"a":[10,35,45],"more":[11],"comprehensive":[12],"understanding":[13],"of":[14,19,25,66,73,106,165],"the":[15,23,64,71,135,163],"occurrence":[16],"and":[17,79,134,147,171,185],"development":[18],"cancer,":[20],"which":[21],"emphasizes":[22],"necessity":[24],"developing":[26],"efficient":[27],"fusion":[30,50],"approaches.":[31],"In":[32],"this":[33,115],"study,":[34],"novel":[36],"framework":[37,68,116],"based":[38],"on":[39,88],"graph":[40],"convolution":[41],"neural":[42],"networks":[43],"with":[44,103,139],"progressively":[46],"helical":[47],"strategy,":[51],"named":[52],"phMFGCN,":[53],"is":[54],"proposed":[55],"effectively":[57],"integrate":[58],"multiple":[59,153],"omics":[60,75],"data.":[61],"To":[62],"demonstrate":[63,162],"effectiveness":[65],"our":[67],"in":[69,92,120,151,188],"addressing":[70],"challenges":[72],"multi":[74],"fusion,":[77],"phMFGCN":[78,99,166],"other":[80,101,140],"widely-used":[81],"machine":[82],"learning":[83],"methods":[84],"conducted":[85],"comparative":[86],"experiments":[87],"predicting":[89],"gene-gene":[90,111,179],"interactions":[91,112,180],"lung":[93,154],"adenocarcinoma.":[94],"The":[95],"results":[96,136,161],"illustrated":[97],"that":[98],"outperforms":[100],"models":[102],"an":[104],"accuracy":[105],"97.94%.":[107],"Additionally,":[108],"506":[109],"new":[110],"predicted":[113],"by":[114],"have":[117],"been":[118],"validated":[119],"databases":[121],"such":[122],"as":[123],"BioGrid.":[124],"Finally,":[125],"it":[126,172],"was":[127],"used":[128],"perform":[130],"gene":[131],"function":[132],"prediction,":[133],"were":[137,149],"inconsistent":[138],"existing":[141],"research,":[142],"for":[143,167,181],"examples:":[144],"Sam68,":[145],"DHX9,":[146],"HNRNPK":[148],"involved":[150],"regulating":[152],"adenocarcinoma":[155],"related":[156],"pathways":[157],"simultaneously.":[158],"All":[159],"these":[160],"universality":[164],"different":[168],"clinical":[169,189],"tasks":[170],"can":[173],"provide":[174],"reference":[175],"target":[176],"genes":[177],"or":[178],"cancer":[182],"mechanism":[183],"research":[184,187],"treatment":[186],"practice.":[190]},"counts_by_year":[{"year":2025,"cited_by_count":3},{"year":2024,"cited_by_count":1}],"updated_date":"2026-05-06T08:25:59.206177","created_date":"2025-10-10T00:00:00"}
