{"id":"https://openalex.org/W4381884100","doi":"https://doi.org/10.1109/access.2023.3288998","title":"On the Origins and Rarity of Locally but Not Globally Identifiable Parameters in Biological Modeling","display_name":"On the Origins and Rarity of Locally but Not Globally Identifiable Parameters in Biological Modeling","publication_year":2023,"publication_date":"2023-01-01","ids":{"openalex":"https://openalex.org/W4381884100","doi":"https://doi.org/10.1109/access.2023.3288998"},"language":"en","primary_location":{"id":"doi:10.1109/access.2023.3288998","is_oa":true,"landing_page_url":"https://doi.org/10.1109/access.2023.3288998","pdf_url":"https://ieeexplore.ieee.org/ielx7/6287639/6514899/10160017.pdf","source":{"id":"https://openalex.org/S2485537415","display_name":"IEEE Access","issn_l":"2169-3536","issn":["2169-3536"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Access","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://ieeexplore.ieee.org/ielx7/6287639/6514899/10160017.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5020424994","display_name":"Xabier Rey Barreiro","orcid":"https://orcid.org/0000-0002-2390-4462"},"institutions":[{"id":"https://openalex.org/I6289922","display_name":"Universidade de Vigo","ror":"https://ror.org/05rdf8595","country_code":"ES","type":"education","lineage":["https://openalex.org/I6289922"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Xabier Rey Barreiro","raw_affiliation_strings":["Department of Systems Engineering and Control, Universidade de Vigo, Galicia, Vigo, Spain"],"raw_orcid":"https://orcid.org/0000-0002-2390-4462","affiliations":[{"raw_affiliation_string":"Department of Systems Engineering and Control, Universidade de Vigo, Galicia, Vigo, Spain","institution_ids":["https://openalex.org/I6289922"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5032919554","display_name":"Alejandro F. Villaverde","orcid":"https://orcid.org/0000-0001-7401-7380"},"institutions":[{"id":"https://openalex.org/I2802755756","display_name":"Centro de Supercomputaci\u00f3n de Galicia","ror":"https://ror.org/02z51cq88","country_code":"ES","type":"nonprofit","lineage":["https://openalex.org/I2802755756"]},{"id":"https://openalex.org/I6289922","display_name":"Universidade de Vigo","ror":"https://ror.org/05rdf8595","country_code":"ES","type":"education","lineage":["https://openalex.org/I6289922"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Alejandro F. Villaverde","raw_affiliation_strings":["Department of Systems Engineering and Control, Universidade de Vigo, Galicia, Vigo, Spain","CITMAga, Santiago de Compostela, Galicia, Spain"],"raw_orcid":"https://orcid.org/0000-0001-7401-7380","affiliations":[{"raw_affiliation_string":"Department of Systems Engineering and Control, Universidade de Vigo, Galicia, Vigo, Spain","institution_ids":["https://openalex.org/I6289922"]},{"raw_affiliation_string":"CITMAga, Santiago de Compostela, Galicia, Spain","institution_ids":["https://openalex.org/I2802755756"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":1850,"currency":"USD","value_usd":1850},"apc_paid":{"value":1850,"currency":"USD","value_usd":1850},"fwci":1.0202,"has_fulltext":true,"cited_by_count":11,"citation_normalized_percentile":{"value":0.74011922,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":99},"biblio":{"volume":"11","issue":null,"first_page":"65457","last_page":"65467"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11764","display_name":"Evolution and Genetic Dynamics","score":0.9980999827384949,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11829","display_name":"Mathematical Biology Tumor Growth","score":0.9860000014305115,"subfield":{"id":"https://openalex.org/subfields/2611","display_name":"Modeling and Simulation"},"field":{"id":"https://openalex.org/fields/26","display_name":"Mathematics"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/identifiability","display_name":"Identifiability","score":0.9638223648071289},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5091990828514099},{"id":"https://openalex.org/keywords/tracing","display_name":"Tracing","score":0.4847554862499237},{"id":"https://openalex.org/keywords/ideal","display_name":"Ideal (ethics)","score":0.47718489170074463},{"id":"https://openalex.org/keywords/value","display_name":"Value (mathematics)","score":0.4488690495491028},{"id":"https://openalex.org/keywords/applied-mathematics","display_name":"Applied mathematics","score":0.4110891819000244},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.3978956937789917},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.3665868639945984},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.3488604426383972},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.1563756763935089},{"id":"https://openalex.org/keywords/epistemology","display_name":"Epistemology","score":0.1548302173614502},{"id":"https://openalex.org/keywords/philosophy","display_name":"Philosophy","score":0.1207849383354187},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.06845331192016602}],"concepts":[{"id":"https://openalex.org/C122770356","wikidata":"https://www.wikidata.org/wiki/Q1656753","display_name":"Identifiability","level":2,"score":0.9638223648071289},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5091990828514099},{"id":"https://openalex.org/C138673069","wikidata":"https://www.wikidata.org/wiki/Q322229","display_name":"Tracing","level":2,"score":0.4847554862499237},{"id":"https://openalex.org/C2776639384","wikidata":"https://www.wikidata.org/wiki/Q840396","display_name":"Ideal (ethics)","level":2,"score":0.47718489170074463},{"id":"https://openalex.org/C2776291640","wikidata":"https://www.wikidata.org/wiki/Q2912517","display_name":"Value (mathematics)","level":2,"score":0.4488690495491028},{"id":"https://openalex.org/C28826006","wikidata":"https://www.wikidata.org/wiki/Q33521","display_name":"Applied mathematics","level":1,"score":0.4110891819000244},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.3978956937789917},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.3665868639945984},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.3488604426383972},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.1563756763935089},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.1548302173614502},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.1207849383354187},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.06845331192016602}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1109/access.2023.3288998","is_oa":true,"landing_page_url":"https://doi.org/10.1109/access.2023.3288998","pdf_url":"https://ieeexplore.ieee.org/ielx7/6287639/6514899/10160017.pdf","source":{"id":"https://openalex.org/S2485537415","display_name":"IEEE Access","issn_l":"2169-3536","issn":["2169-3536"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Access","raw_type":"journal-article"},{"id":"pmh:oai:www.investigo.biblioteca.uvigo.es:11093/5111","is_oa":true,"landing_page_url":"http://hdl.handle.net/11093/5111","pdf_url":"https://www.investigo.biblioteca.uvigo.es/xmlui/bitstream/11093/5111/4/2023_barreiro_parameters_biological_modeling.pdf","source":{"id":"https://openalex.org/S4377196408","display_name":"Investigo Institutional repository of UVigo (Universidade de Vigo)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I6289922","host_organization_name":"Universidade de Vigo","host_organization_lineage":["https://openalex.org/I6289922"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"article"},{"id":"pmh:oai:doaj.org/article:850938da890340cdaee41cde184e9ca4","is_oa":true,"landing_page_url":"https://doaj.org/article/850938da890340cdaee41cde184e9ca4","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"IEEE Access, Vol 11, Pp 65457-65467 (2023)","raw_type":"article"}],"best_oa_location":{"id":"doi:10.1109/access.2023.3288998","is_oa":true,"landing_page_url":"https://doi.org/10.1109/access.2023.3288998","pdf_url":"https://ieeexplore.ieee.org/ielx7/6287639/6514899/10160017.pdf","source":{"id":"https://openalex.org/S2485537415","display_name":"IEEE Access","issn_l":"2169-3536","issn":["2169-3536"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Access","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1091473466","display_name":null,"funder_award_id":"ED431F 2021/003","funder_id":"https://openalex.org/F4320326655","funder_display_name":"Xunta de Galicia"},{"id":"https://openalex.org/G1175115578","display_name":null,"funder_award_id":"AEI//10.13039/501100011033/","funder_id":"https://openalex.org/F4320335598","funder_display_name":"Agencia Estatal de Investigaci\u00f3n"},{"id":"https://openalex.org/G2262748287","display_name":null,"funder_award_id":"501100011033","funder_id":"https://openalex.org/F4320335598","funder_display_name":"Agencia Estatal de Investigaci\u00f3n"},{"id":"https://openalex.org/G300979063","display_name":null,"funder_award_id":"10.13039/501100011033","funder_id":"https://openalex.org/F4320335598","funder_display_name":"Agencia Estatal de Investigaci\u00f3n"},{"id":"https://openalex.org/G3255697262","display_name":null,"funder_award_id":"PID2020-113992RA-I00","funder_id":"https://openalex.org/F4320326655","funder_display_name":"Xunta de Galicia"},{"id":"https://openalex.org/G34346518","display_name":null,"funder_award_id":"MCIN/AEI/10.13039/501 100 011 033","funder_id":"https://openalex.org/F4320335598","funder_display_name":"Agencia Estatal de Investigaci\u00f3n"},{"id":"https://openalex.org/G3480869486","display_name":null,"funder_award_id":"13039","funder_id":"https://openalex.org/F4320335598","funder_display_name":"Agencia Estatal de Investigaci\u00f3n"},{"id":"https://openalex.org/G4092263876","display_name":null,"funder_award_id":"MCIN/AEI /10.13039/501100011033","funder_id":"https://openalex.org/F4320326655","funder_display_name":"Xunta de Galicia"},{"id":"https://openalex.org/G4120009395","display_name":null,"funder_award_id":"RYC-2019-027537-I","funder_id":"https://openalex.org/F4320326655","funder_display_name":"Xunta de Galicia"},{"id":"https://openalex.org/G425668148","display_name":null,"funder_award_id":".13039/501100011033","funder_id":"https://openalex.org/F4320335598","funder_display_name":"Agencia Estatal de Investigaci\u00f3n"},{"id":"https://openalex.org/G5080475149","display_name":null,"funder_award_id":"10.13039","funder_id":"https://openalex.org/F4320335598","funder_display_name":"Agencia Estatal de Investigaci\u00f3n"},{"id":"https://openalex.org/G6218905885","display_name":null,"funder_award_id":"501100011033","funder_id":"https://openalex.org/F4320338080","funder_display_name":"European Social Fund"}],"funders":[{"id":"https://openalex.org/F4320324091","display_name":"Universidade de Vigo","ror":"https://ror.org/05rdf8595"},{"id":"https://openalex.org/F4320326655","display_name":"Xunta de Galicia","ror":"https://ror.org/0181xnw06"},{"id":"https://openalex.org/F4320327735","display_name":"Universit\u00e4t Kassel","ror":null},{"id":"https://openalex.org/F4320335598","display_name":"Agencia Estatal de Investigaci\u00f3n","ror":null},{"id":"https://openalex.org/F4320338080","display_name":"European Social Fund","ror":"https://ror.org/00k4n6c32"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4381884100.pdf","grobid_xml":"https://content.openalex.org/works/W4381884100.grobid-xml"},"referenced_works_count":85,"referenced_works":["https://openalex.org/W47680732","https://openalex.org/W565004971","https://openalex.org/W1485426748","https://openalex.org/W1488159211","https://openalex.org/W1583357624","https://openalex.org/W1963784871","https://openalex.org/W1967550485","https://openalex.org/W1968625379","https://openalex.org/W1970191127","https://openalex.org/W1971327350","https://openalex.org/W1972386567","https://openalex.org/W1974595716","https://openalex.org/W1975308252","https://openalex.org/W1975444080","https://openalex.org/W1982528660","https://openalex.org/W1988555439","https://openalex.org/W1991568017","https://openalex.org/W1992476963","https://openalex.org/W1995929729","https://openalex.org/W1999408263","https://openalex.org/W2003195392","https://openalex.org/W2034396059","https://openalex.org/W2043674722","https://openalex.org/W2044403736","https://openalex.org/W2048110904","https://openalex.org/W2048946655","https://openalex.org/W2060660523","https://openalex.org/W2067265199","https://openalex.org/W2072667966","https://openalex.org/W2074631960","https://openalex.org/W2077298225","https://openalex.org/W2093019727","https://openalex.org/W2093458589","https://openalex.org/W2111123192","https://openalex.org/W2113105229","https://openalex.org/W2126571583","https://openalex.org/W2147437442","https://openalex.org/W2147641419","https://openalex.org/W2171914026","https://openalex.org/W2300639120","https://openalex.org/W2337101260","https://openalex.org/W2394603902","https://openalex.org/W2401375860","https://openalex.org/W2460076960","https://openalex.org/W2528996153","https://openalex.org/W2552320392","https://openalex.org/W2616910144","https://openalex.org/W2738933006","https://openalex.org/W2784454168","https://openalex.org/W2794521555","https://openalex.org/W2921015815","https://openalex.org/W2924136820","https://openalex.org/W2946782338","https://openalex.org/W2949814822","https://openalex.org/W2954868958","https://openalex.org/W2962075007","https://openalex.org/W2981986463","https://openalex.org/W3004780251","https://openalex.org/W3011351342","https://openalex.org/W3011967751","https://openalex.org/W3012757856","https://openalex.org/W3012864042","https://openalex.org/W3014555322","https://openalex.org/W3018293801","https://openalex.org/W3029757120","https://openalex.org/W3032918313","https://openalex.org/W3035299455","https://openalex.org/W3036694777","https://openalex.org/W3110513543","https://openalex.org/W3116393786","https://openalex.org/W3126293391","https://openalex.org/W3139456908","https://openalex.org/W3184522930","https://openalex.org/W3204234525","https://openalex.org/W3204465511","https://openalex.org/W3210716569","https://openalex.org/W4238067749","https://openalex.org/W4286879859","https://openalex.org/W4287824080","https://openalex.org/W4318755299","https://openalex.org/W6629360055","https://openalex.org/W6682074523","https://openalex.org/W6775387619","https://openalex.org/W6775847780","https://openalex.org/W6840376093"],"related_works":["https://openalex.org/W2724847603","https://openalex.org/W2034041141","https://openalex.org/W2184661725","https://openalex.org/W2573470972","https://openalex.org/W112856298","https://openalex.org/W2105626102","https://openalex.org/W2131038454","https://openalex.org/W4240568257","https://openalex.org/W2900187352","https://openalex.org/W1996342314"],"abstract_inverted_index":{"Structural":[0],"identifiability":[1,50,59],"determines":[2],"the":[3,7,78,117,134,142,153,159,167,174,193,197,202],"possibility":[4,160],"of":[5,9,80,112,122,133,152,161,166],"estimating":[6],"parameters":[8,135,144,178],"a":[10,21,110,120,210],"model":[11,154],"by":[12,91],"observing":[13],"its":[14,29],"output":[15],"in":[16,86,100,201,217],"an":[17],"ideal":[18],"experiment.":[19],"If":[20],"parameter":[22,97],"is":[23,45,55],"structurallylocallybut":[24],"not":[25,187,220],"globally":[26],"identifiable":[27,96,99],"(SLNGI),":[28],"true":[30,175,194],"value":[31],"cannot":[32],"be":[33],"uniquely":[34],"inferred":[35],"because":[36,57],"several":[37],"equivalent":[38,172,198],"solutions":[39,168],"exist.":[40],"In":[41,190],"biological":[42],"modeling":[43],"it":[44,225],"sometimes":[46],"assumed":[47],"that":[48,130,169,216],"local":[49,58,231],"entails":[51],"global":[52,67],"identifiability,":[53,128],"which":[54,185],"convenient":[56],"tests":[60],"are":[61,136,170,186],"typically":[62],"less":[63],"computationally":[64],"demanding":[65],"than":[66],"tests.":[68],"However,":[69],"this":[70,84,87,105],"assumption":[71],"has":[72],"never":[73],"been":[74],"investigated":[75,140,158],"beyond":[76],"demonstrating":[77],"existence":[79],"counter-examples.":[81],"To":[82,103],"clarify":[83],"matter,":[85],"paper":[88],"we":[89,108,139,157],"began":[90],"askinghow":[92],"oftena":[93],"structurally":[94],"locally":[95],"isnotglobally":[98],"systems":[101,222],"biology.":[102],"answer":[104],"question":[106],"empirically":[107],"assembled":[109],"collection":[111],"102":[113],"mathematical":[114],"models":[115],"from":[116],"literature,":[118],"with":[119,182],"total":[121],"763":[123],"parameters.":[124],"We":[125],"analysed":[126],"their":[127,147],"determining":[129],"approximately":[131],"5%":[132],"SLNGI.":[137],"Next":[138],"how":[141],"SLNGI":[143],"arise,":[145],"tracing":[146],"origin":[148],"to":[149,173,227],"particular":[150],"features":[151],"equations.":[155],"Finally,":[156],"obtaining":[162],"false":[163],"estimates.":[164],"Some":[165],"mathematically":[171],"one":[176,199],"involved":[177],"and/or":[179],"initial":[180],"conditions":[181],"negative":[183],"values,":[184],"biologically":[188],"meaningful.":[189],"other":[191],"cases":[192],"solution":[195],"and":[196,214],"were":[200],"same":[203],"range.":[204],"These":[205],"results":[206],"provide":[207],"insight":[208],"about":[209],"previously":[211],"unexplored":[212],"hypothesis,":[213],"suggest":[215],"most":[218],"(albeit":[219],"all)":[221],"biology":[223],"applications":[224],"suffices":[226],"test":[228],"for":[229],"structural":[230],"identifiability.":[232]},"counts_by_year":[{"year":2026,"cited_by_count":3},{"year":2025,"cited_by_count":7},{"year":2024,"cited_by_count":1}],"updated_date":"2026-08-01T09:00:35.917206","created_date":"2025-10-10T00:00:00"}
