{"id":"https://openalex.org/W3196257929","doi":"https://doi.org/10.1109/access.2021.3104724","title":"Automatic Diagnostic Tool for Predicting Cancer Grade in Bladder Cancer Patients Using Deep Learning","display_name":"Automatic Diagnostic Tool for Predicting Cancer Grade in Bladder Cancer Patients Using Deep Learning","publication_year":2021,"publication_date":"2021-01-01","ids":{"openalex":"https://openalex.org/W3196257929","doi":"https://doi.org/10.1109/access.2021.3104724","mag":"3196257929"},"language":"en","primary_location":{"id":"doi:10.1109/access.2021.3104724","is_oa":true,"landing_page_url":"https://doi.org/10.1109/access.2021.3104724","pdf_url":"https://ieeexplore.ieee.org/ielx7/6287639/6514899/09513308.pdf","source":{"id":"https://openalex.org/S2485537415","display_name":"IEEE Access","issn_l":"2169-3536","issn":["2169-3536"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Access","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://ieeexplore.ieee.org/ielx7/6287639/6514899/09513308.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5052801680","display_name":"Rune Wetteland","orcid":"https://orcid.org/0000-0002-9995-4204"},"institutions":[{"id":"https://openalex.org/I92008406","display_name":"University of Stavanger","ror":"https://ror.org/02qte9q33","country_code":"NO","type":"education","lineage":["https://openalex.org/I92008406"]}],"countries":["NO"],"is_corresponding":true,"raw_author_name":"Rune Wetteland","raw_affiliation_strings":["Department of Electrical Engineering and Computer Science, University of Stavanger, Stavanger, Norway"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Electrical Engineering and Computer Science, University of Stavanger, Stavanger, Norway","institution_ids":["https://openalex.org/I92008406"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5056132605","display_name":"Vebj\u00f8rn Kvikstad","orcid":"https://orcid.org/0000-0003-2980-8217"},"institutions":[{"id":"https://openalex.org/I2800132241","display_name":"Stavanger University Hospital","ror":"https://ror.org/04zn72g03","country_code":"NO","type":"healthcare","lineage":["https://openalex.org/I2800132241"]},{"id":"https://openalex.org/I92008406","display_name":"University of Stavanger","ror":"https://ror.org/02qte9q33","country_code":"NO","type":"education","lineage":["https://openalex.org/I92008406"]}],"countries":["NO"],"is_corresponding":false,"raw_author_name":"Vebjorn Kvikstad","raw_affiliation_strings":["Department of Chemistry, Bioscience and Environmental Engineering, University of Stavanger, Stavanger, Norway","Department of Pathology, Stavanger University Hospital, Stavanger, Norway"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Chemistry, Bioscience and Environmental Engineering, University of Stavanger, Stavanger, Norway","institution_ids":["https://openalex.org/I92008406"]},{"raw_affiliation_string":"Department of Pathology, Stavanger University Hospital, Stavanger, Norway","institution_ids":["https://openalex.org/I2800132241"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5033070399","display_name":"Trygve Eftest\u00f8l","orcid":null},"institutions":[{"id":"https://openalex.org/I92008406","display_name":"University of Stavanger","ror":"https://ror.org/02qte9q33","country_code":"NO","type":"education","lineage":["https://openalex.org/I92008406"]}],"countries":["NO"],"is_corresponding":false,"raw_author_name":"Trygve Eftestol","raw_affiliation_strings":["Department of Electrical Engineering and Computer Science, University of Stavanger, Stavanger, Norway"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Electrical Engineering and Computer Science, University of Stavanger, Stavanger, Norway","institution_ids":["https://openalex.org/I92008406"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5007134152","display_name":"Erlend T\u00f8ssebro","orcid":"https://orcid.org/0000-0002-4267-4957"},"institutions":[{"id":"https://openalex.org/I92008406","display_name":"University of Stavanger","ror":"https://ror.org/02qte9q33","country_code":"NO","type":"education","lineage":["https://openalex.org/I92008406"]}],"countries":["NO"],"is_corresponding":false,"raw_author_name":"Erlend Tossebro","raw_affiliation_strings":["Department of Electrical Engineering and Computer Science, University of Stavanger, Stavanger, Norway"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Electrical Engineering and Computer Science, University of Stavanger, Stavanger, Norway","institution_ids":["https://openalex.org/I92008406"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5065343170","display_name":"Melinda Lillesand","orcid":"https://orcid.org/0000-0001-8898-1330"},"institutions":[{"id":"https://openalex.org/I2800132241","display_name":"Stavanger University Hospital","ror":"https://ror.org/04zn72g03","country_code":"NO","type":"healthcare","lineage":["https://openalex.org/I2800132241"]}],"countries":["NO"],"is_corresponding":false,"raw_author_name":"Melinda Lillesand","raw_affiliation_strings":["Department of Pathology, Stavanger University Hospital, Stavanger, Norway"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Pathology, Stavanger University Hospital, Stavanger, Norway","institution_ids":["https://openalex.org/I2800132241"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5003110329","display_name":"Emiel A. M. Janssen","orcid":"https://orcid.org/0000-0002-7760-5396"},"institutions":[{"id":"https://openalex.org/I2800132241","display_name":"Stavanger University Hospital","ror":"https://ror.org/04zn72g03","country_code":"NO","type":"healthcare","lineage":["https://openalex.org/I2800132241"]},{"id":"https://openalex.org/I92008406","display_name":"University of Stavanger","ror":"https://ror.org/02qte9q33","country_code":"NO","type":"education","lineage":["https://openalex.org/I92008406"]}],"countries":["NO"],"is_corresponding":false,"raw_author_name":"Emiel A. M. Janssen","raw_affiliation_strings":["Department of Chemistry, Bioscience and Environmental Engineering, University of Stavanger, Stavanger, Norway","Department of Pathology, Stavanger University Hospital, Stavanger, Norway"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Chemistry, Bioscience and Environmental Engineering, University of Stavanger, Stavanger, Norway","institution_ids":["https://openalex.org/I92008406"]},{"raw_affiliation_string":"Department of Pathology, Stavanger University Hospital, Stavanger, Norway","institution_ids":["https://openalex.org/I2800132241"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5068843545","display_name":"Kjersti Engan","orcid":"https://orcid.org/0000-0002-8970-0067"},"institutions":[{"id":"https://openalex.org/I92008406","display_name":"University of Stavanger","ror":"https://ror.org/02qte9q33","country_code":"NO","type":"education","lineage":["https://openalex.org/I92008406"]}],"countries":["NO"],"is_corresponding":false,"raw_author_name":"Kjersti Engan","raw_affiliation_strings":["Department of Electrical Engineering and Computer Science, University of Stavanger, Stavanger, Norway"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Electrical Engineering and Computer Science, University of Stavanger, Stavanger, Norway","institution_ids":["https://openalex.org/I92008406"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5052801680"],"corresponding_institution_ids":["https://openalex.org/I92008406"],"apc_list":{"value":1850,"currency":"USD","value_usd":1850},"apc_paid":{"value":1850,"currency":"USD","value_usd":1850},"fwci":2.524,"has_fulltext":true,"cited_by_count":19,"citation_normalized_percentile":{"value":0.89734455,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"9","issue":null,"first_page":"115813","last_page":"115825"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10458","display_name":"Bladder and Urothelial Cancer Treatments","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/2746","display_name":"Surgery"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T10458","display_name":"Bladder and Urothelial Cancer Treatments","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/2746","display_name":"Surgery"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10552","display_name":"Colorectal Cancer Screening and Detection","score":0.9991999864578247,"subfield":{"id":"https://openalex.org/subfields/2730","display_name":"Oncology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10124","display_name":"Prostate Cancer Diagnosis and Treatment","score":0.9908999800682068,"subfield":{"id":"https://openalex.org/subfields/2740","display_name":"Pulmonary and Respiratory Medicine"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/bladder-cancer","display_name":"Bladder cancer","score":0.6356179118156433},{"id":"https://openalex.org/keywords/grading","display_name":"Grading (engineering)","score":0.6135961413383484},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.6026383638381958},{"id":"https://openalex.org/keywords/convolutional-neural-network","display_name":"Convolutional neural network","score":0.5232852101325989},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5110818147659302},{"id":"https://openalex.org/keywords/cancer","display_name":"Cancer","score":0.508412778377533},{"id":"https://openalex.org/keywords/test-set","display_name":"Test set","score":0.5037335753440857},{"id":"https://openalex.org/keywords/urothelium","display_name":"Urothelium","score":0.47530636191368103},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.45671406388282776},{"id":"https://openalex.org/keywords/magnification","display_name":"Magnification","score":0.4181007444858551},{"id":"https://openalex.org/keywords/pathology","display_name":"Pathology","score":0.3219532072544098},{"id":"https://openalex.org/keywords/urinary-bladder","display_name":"Urinary bladder","score":0.19366136193275452},{"id":"https://openalex.org/keywords/internal-medicine","display_name":"Internal medicine","score":0.16687828302383423},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.08714902400970459}],"concepts":[{"id":"https://openalex.org/C2780352672","wikidata":"https://www.wikidata.org/wiki/Q504775","display_name":"Bladder cancer","level":3,"score":0.6356179118156433},{"id":"https://openalex.org/C2777286243","wikidata":"https://www.wikidata.org/wiki/Q5591926","display_name":"Grading (engineering)","level":2,"score":0.6135961413383484},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.6026383638381958},{"id":"https://openalex.org/C81363708","wikidata":"https://www.wikidata.org/wiki/Q17084460","display_name":"Convolutional neural network","level":2,"score":0.5232852101325989},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5110818147659302},{"id":"https://openalex.org/C121608353","wikidata":"https://www.wikidata.org/wiki/Q12078","display_name":"Cancer","level":2,"score":0.508412778377533},{"id":"https://openalex.org/C169903167","wikidata":"https://www.wikidata.org/wiki/Q3985153","display_name":"Test set","level":2,"score":0.5037335753440857},{"id":"https://openalex.org/C2777540882","wikidata":"https://www.wikidata.org/wiki/Q11878994","display_name":"Urothelium","level":3,"score":0.47530636191368103},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.45671406388282776},{"id":"https://openalex.org/C4144372","wikidata":"https://www.wikidata.org/wiki/Q675287","display_name":"Magnification","level":2,"score":0.4181007444858551},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.3219532072544098},{"id":"https://openalex.org/C2779762690","wikidata":"https://www.wikidata.org/wiki/Q9382","display_name":"Urinary bladder","level":2,"score":0.19366136193275452},{"id":"https://openalex.org/C126322002","wikidata":"https://www.wikidata.org/wiki/Q11180","display_name":"Internal medicine","level":1,"score":0.16687828302383423},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.08714902400970459},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1109/access.2021.3104724","is_oa":true,"landing_page_url":"https://doi.org/10.1109/access.2021.3104724","pdf_url":"https://ieeexplore.ieee.org/ielx7/6287639/6514899/09513308.pdf","source":{"id":"https://openalex.org/S2485537415","display_name":"IEEE Access","issn_l":"2169-3536","issn":["2169-3536"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Access","raw_type":"journal-article"},{"id":"pmh:oai:doaj.org/article:775b89b467b842b2942c635122622d82","is_oa":true,"landing_page_url":"https://doaj.org/article/775b89b467b842b2942c635122622d82","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"IEEE Access, Vol 9, Pp 115813-115825 (2021)","raw_type":"article"},{"id":"pmh:oai:uis.brage.unit.no:11250/2835219","is_oa":true,"landing_page_url":"https://hdl.handle.net/11250/2835219","pdf_url":null,"source":{"id":"https://openalex.org/S4306401716","display_name":"Duo Research Archive (University of Oslo)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I184942183","host_organization_name":"University of Oslo","host_organization_lineage":["https://openalex.org/I184942183"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"115813 - 115825","raw_type":"info:eu-repo/semantics/other"}],"best_oa_location":{"id":"doi:10.1109/access.2021.3104724","is_oa":true,"landing_page_url":"https://doi.org/10.1109/access.2021.3104724","pdf_url":"https://ieeexplore.ieee.org/ielx7/6287639/6514899/09513308.pdf","source":{"id":"https://openalex.org/S2485537415","display_name":"IEEE Access","issn_l":"2169-3536","issn":["2169-3536"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Access","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3196257929.pdf","grobid_xml":"https://content.openalex.org/works/W3196257929.grobid-xml"},"referenced_works_count":39,"referenced_works":["https://openalex.org/W172279490","https://openalex.org/W2013009938","https://openalex.org/W2032659674","https://openalex.org/W2101234009","https://openalex.org/W2105248842","https://openalex.org/W2171827881","https://openalex.org/W2402144811","https://openalex.org/W2470965540","https://openalex.org/W2474421929","https://openalex.org/W2765195178","https://openalex.org/W2916183155","https://openalex.org/W2921993898","https://openalex.org/W2943370629","https://openalex.org/W2945807221","https://openalex.org/W2955152335","https://openalex.org/W2956228567","https://openalex.org/W2964317032","https://openalex.org/W2964317695","https://openalex.org/W2967444033","https://openalex.org/W2967477549","https://openalex.org/W2969790209","https://openalex.org/W2974825848","https://openalex.org/W3004053956","https://openalex.org/W3007110023","https://openalex.org/W3009928129","https://openalex.org/W3016006586","https://openalex.org/W3034447539","https://openalex.org/W3036709462","https://openalex.org/W3040532312","https://openalex.org/W3086667591","https://openalex.org/W3093253397","https://openalex.org/W3105980361","https://openalex.org/W3116250686","https://openalex.org/W3128646645","https://openalex.org/W3203593435","https://openalex.org/W4288289119","https://openalex.org/W6675354045","https://openalex.org/W6713134421","https://openalex.org/W6721136770"],"related_works":["https://openalex.org/W1968035688","https://openalex.org/W4256609757","https://openalex.org/W2152595177","https://openalex.org/W2041117173","https://openalex.org/W2050448556","https://openalex.org/W2381690247","https://openalex.org/W1978476178","https://openalex.org/W2022127494","https://openalex.org/W1810141276","https://openalex.org/W2292689095"],"abstract_inverted_index":{"The":[0,71,125,211,237],"most":[1],"common":[2],"type":[3],"of":[4,48,68,88,121,128,201,208,224,247],"bladder":[5,49],"cancer":[6,14,50],"is":[7,11,42,141],"urothelial":[8],"carcinoma,":[9],"which":[10],"among":[12],"the":[13,17,69,81,86,112,119,122,144,161,190,195,251],"types":[15],"with":[16],"highest":[18],"recurrence":[19],"rate":[20],"and":[21,38,54,57,77,116,154,172,174,229,253],"lifetime":[22],"treatment":[23],"cost":[24],"per":[25],"patient.":[26],"Diagnosed":[27],"patients":[28],"are":[29,158],"stratified":[30],"into":[31,143],"risk":[32],"groups,":[33],"mainly":[34],"based":[35,183],"on":[36,80,133,203,217],"grade":[37,120,136],"stage.":[39],"However,":[40],"it":[41],"well":[43],"known":[44],"that":[45,105],"correct":[46],"grading":[47,192],"suffers":[51],"from":[52,160,166],"intra-":[53],"interobserver":[55],"variability":[56],"inconsistent":[58],"reproducibility":[59],"between":[60],"pathologists,":[61],"potentially":[62],"leading":[63],"to":[64,92],"under-":[65],"or":[66],"overtreatment":[67],"patients.":[70],"economic":[72],"burden,":[73],"unnecessary":[74],"patient":[75],"suffering,":[76],"additional":[78],"load":[79],"health":[82],"care":[83],"system":[84,126],"illustrate":[85],"importance":[87],"developing":[89],"new":[90],"tools":[91],"aid":[93],"pathologists.":[94],"We":[95],"propose":[96],"a":[97,139,178,204,218,235],"pipeline,":[98],"called":[99],"TRI":[100,238],"<sub":[101,239],"xmlns:mml=\"http://www.w3.org/1998/Math/MathML\"":[102,240],"xmlns:xlink=\"http://www.w3.org/1999/xlink\">grade</sub>":[103,241],",":[104],"will":[106],"identify":[107],"diagnostic":[108,162],"relevant":[109,163],"regions":[110,231],"in":[111],"whole-slide":[113],"image":[114],"(WSI)":[115],"collectively":[117],"predict":[118],"current":[123],"WSI.":[124],"consists":[127],"two":[129],"main":[130],"models,":[131],"trained":[132,188],"weak":[134],"slide-level":[135,191],"labels.":[137],"First,":[138],"WSI":[140],"segmented":[142],"different":[145],"tissue":[146,165],"classes":[147],"(urothelium,":[148],"stroma,":[149],"muscle,":[150],"blood,":[151],"damaged":[152],"tissue,":[153],"background).":[155],"Next,":[156],"tiles":[157],"extracted":[159],"urothelium":[164],"three":[167],"magnification":[168],"levels":[169],"(25x,":[170],"100x,":[171],"400x)":[173],"processed":[175],"sequentially":[176],"by":[177,234],"convolutional":[179],"neural":[180],"network":[181],"(CNN)":[182],"model.":[184],"Ten":[185],"models":[186],"were":[187,232],"for":[189,249],"experiment,":[193],"where":[194,227],"best":[196,212],"model":[197,213],"achieved":[198,243],"an":[199,244],"F1-score":[200,246],"0.90":[202],"test":[205,221],"set":[206],"consisting":[207,223],"50":[209],"WSIs.":[210],"was":[214],"further":[215],"evaluated":[216],"smaller":[219],"segmentation":[220],"set,":[222],"14":[225],"WSIs":[226],"low-":[228],"high-grade":[230,254],"annotated":[233],"pathologist.":[236],"pipeline":[242],"average":[245],"0.91":[248],"both":[250],"low-grade":[252],"classes.":[255]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":6},{"year":2024,"cited_by_count":3},{"year":2023,"cited_by_count":4},{"year":2022,"cited_by_count":4},{"year":2021,"cited_by_count":1}],"updated_date":"2026-05-08T15:41:06.802602","created_date":"2025-10-10T00:00:00"}
