{"id":"https://openalex.org/W3106271252","doi":"https://doi.org/10.1109/access.2020.3039064","title":"A Scientific Knowledge Discovery and Data Mining Process Model for Metabolomics","display_name":"A Scientific Knowledge Discovery and Data Mining Process Model for Metabolomics","publication_year":2020,"publication_date":"2020-01-01","ids":{"openalex":"https://openalex.org/W3106271252","doi":"https://doi.org/10.1109/access.2020.3039064","mag":"3106271252"},"language":"en","primary_location":{"id":"doi:10.1109/access.2020.3039064","is_oa":true,"landing_page_url":"https://doi.org/10.1109/access.2020.3039064","pdf_url":"https://ieeexplore.ieee.org/ielx7/6287639/6514899/09263253.pdf","source":{"id":"https://openalex.org/S2485537415","display_name":"IEEE Access","issn_l":"2169-3536","issn":["2169-3536"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Access","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://ieeexplore.ieee.org/ielx7/6287639/6514899/09263253.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5049370073","display_name":"Ahmed BaniMustafa","orcid":"https://orcid.org/0000-0001-7502-7978"},"institutions":[{"id":"https://openalex.org/I92449659","display_name":"Isra University","ror":"https://ror.org/04d4bt482","country_code":"JO","type":"education","lineage":["https://openalex.org/I92449659"]}],"countries":["JO"],"is_corresponding":false,"raw_author_name":"Ahmed Banimustafa","raw_affiliation_strings":["Department of Software Engineering, ISRA University, Amman, Jordan"],"raw_orcid":"https://orcid.org/0000-0001-7502-7978","affiliations":[{"raw_affiliation_string":"Department of Software Engineering, ISRA University, Amman, Jordan","institution_ids":["https://openalex.org/I92449659"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5079734062","display_name":"Nigel Hardy","orcid":"https://orcid.org/0000-0002-9607-2601"},"institutions":[{"id":"https://openalex.org/I16038530","display_name":"Aberystwyth University","ror":"https://ror.org/015m2p889","country_code":"GB","type":"education","lineage":["https://openalex.org/I16038530"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Nigel Hardy","raw_affiliation_strings":["Department of Computer Science, Aberystwyth University, Aberystwyth, U.K"],"raw_orcid":"https://orcid.org/0000-0002-9607-2601","affiliations":[{"raw_affiliation_string":"Department of Computer Science, Aberystwyth University, Aberystwyth, U.K","institution_ids":["https://openalex.org/I16038530"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":2,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":1850,"currency":"USD","value_usd":1850},"apc_paid":{"value":1850,"currency":"USD","value_usd":1850},"fwci":1.1671,"has_fulltext":true,"cited_by_count":16,"citation_normalized_percentile":{"value":0.78209391,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"8","issue":null,"first_page":"209964","last_page":"210005"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10836","display_name":"Metabolomics and Mass Spectrometry Studies","score":0.9955000281333923,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10836","display_name":"Metabolomics and Mass Spectrometry Studies","score":0.9955000281333923,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9769999980926514,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12205","display_name":"Time Series Analysis and Forecasting","score":0.9286999702453613,"subfield":{"id":"https://openalex.org/subfields/1711","display_name":"Signal Processing"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/interpretability","display_name":"Interpretability","score":0.7860492467880249},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7328910231590271},{"id":"https://openalex.org/keywords/metabolomics","display_name":"Metabolomics","score":0.7014223337173462},{"id":"https://openalex.org/keywords/process","display_name":"Process (computing)","score":0.6802815198898315},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.5732295513153076},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.532452404499054},{"id":"https://openalex.org/keywords/knowledge-extraction","display_name":"Knowledge extraction","score":0.5126523375511169},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.46941789984703064},{"id":"https://openalex.org/keywords/process-mining","display_name":"Process mining","score":0.41478127241134644},{"id":"https://openalex.org/keywords/work-in-process","display_name":"Work in process","score":0.3856026232242584},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.24272027611732483},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.15697109699249268},{"id":"https://openalex.org/keywords/engineering","display_name":"Engineering","score":0.1445428729057312},{"id":"https://openalex.org/keywords/business-process-management","display_name":"Business process management","score":0.08978885412216187}],"concepts":[{"id":"https://openalex.org/C2781067378","wikidata":"https://www.wikidata.org/wiki/Q17027399","display_name":"Interpretability","level":2,"score":0.7860492467880249},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7328910231590271},{"id":"https://openalex.org/C21565614","wikidata":"https://www.wikidata.org/wiki/Q12149006","display_name":"Metabolomics","level":2,"score":0.7014223337173462},{"id":"https://openalex.org/C98045186","wikidata":"https://www.wikidata.org/wiki/Q205663","display_name":"Process (computing)","level":2,"score":0.6802815198898315},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.5732295513153076},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.532452404499054},{"id":"https://openalex.org/C120567893","wikidata":"https://www.wikidata.org/wiki/Q1582085","display_name":"Knowledge extraction","level":2,"score":0.5126523375511169},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.46941789984703064},{"id":"https://openalex.org/C124670913","wikidata":"https://www.wikidata.org/wiki/Q2608526","display_name":"Process mining","level":5,"score":0.41478127241134644},{"id":"https://openalex.org/C174998907","wikidata":"https://www.wikidata.org/wiki/Q357662","display_name":"Work in process","level":2,"score":0.3856026232242584},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.24272027611732483},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.15697109699249268},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.1445428729057312},{"id":"https://openalex.org/C80309976","wikidata":"https://www.wikidata.org/wiki/Q7007379","display_name":"Business process management","level":4,"score":0.08978885412216187},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0},{"id":"https://openalex.org/C85345410","wikidata":"https://www.wikidata.org/wiki/Q851587","display_name":"Business process","level":3,"score":0.0},{"id":"https://openalex.org/C21547014","wikidata":"https://www.wikidata.org/wiki/Q1423657","display_name":"Operations management","level":1,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1109/access.2020.3039064","is_oa":true,"landing_page_url":"https://doi.org/10.1109/access.2020.3039064","pdf_url":"https://ieeexplore.ieee.org/ielx7/6287639/6514899/09263253.pdf","source":{"id":"https://openalex.org/S2485537415","display_name":"IEEE Access","issn_l":"2169-3536","issn":["2169-3536"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Access","raw_type":"journal-article"},{"id":"pmh:oai:aber.ac.uk:publications/5c747982-c6fd-4358-8d99-36508024b1c3","is_oa":true,"landing_page_url":"https://hdl.handle.net/2160/5c747982-c6fd-4358-8d99-36508024b1c3","pdf_url":"https://pure.aber.ac.uk/portal/en/publications/a-scientific-knowledge-discovery-and-data-mining-process-model-for-metabolomics(5c747982-c6fd-4358-8d99-36508024b1c3).html","source":{"id":"https://openalex.org/S4306401660","display_name":"Aberystwyth Research portal (Aberystwyth University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I16038530","host_organization_name":"Aberystwyth University","host_organization_lineage":["https://openalex.org/I16038530"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":""},{"id":"pmh:oai:doaj.org/article:02886fee107d440e922c0280141cb4d8","is_oa":true,"landing_page_url":"https://doaj.org/article/02886fee107d440e922c0280141cb4d8","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"IEEE Access, Vol 8, Pp 209964-210005 (2020)","raw_type":"article"}],"best_oa_location":{"id":"doi:10.1109/access.2020.3039064","is_oa":true,"landing_page_url":"https://doi.org/10.1109/access.2020.3039064","pdf_url":"https://ieeexplore.ieee.org/ielx7/6287639/6514899/09263253.pdf","source":{"id":"https://openalex.org/S2485537415","display_name":"IEEE Access","issn_l":"2169-3536","issn":["2169-3536"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Access","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.41999998688697815,"id":"https://metadata.un.org/sdg/9","display_name":"Industry, innovation and infrastructure"}],"awards":[],"funders":[],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3106271252.pdf","grobid_xml":"https://content.openalex.org/works/W3106271252.grobid-xml"},"referenced_works_count":125,"referenced_works":["https://openalex.org/W41868933","https://openalex.org/W65738273","https://openalex.org/W118909908","https://openalex.org/W242171001","https://openalex.org/W254669395","https://openalex.org/W619572877","https://openalex.org/W1482864141","https://openalex.org/W1499874391","https://openalex.org/W1502989400","https://openalex.org/W1531110464","https://openalex.org/W1549220645","https://openalex.org/W1562851730","https://openalex.org/W1565790345","https://openalex.org/W1566241536","https://openalex.org/W1589232256","https://openalex.org/W1593249691","https://openalex.org/W1606653819","https://openalex.org/W1608425861","https://openalex.org/W1611854178","https://openalex.org/W1761787460","https://openalex.org/W1873332500","https://openalex.org/W1893541178","https://openalex.org/W1930624869","https://openalex.org/W1948418367","https://openalex.org/W1963542257","https://openalex.org/W1965073999","https://openalex.org/W1968817010","https://openalex.org/W1969733464","https://openalex.org/W1971606140","https://openalex.org/W1974777883","https://openalex.org/W1978760769","https://openalex.org/W1980688898","https://openalex.org/W1982185581","https://openalex.org/W1985838672","https://openalex.org/W1988457908","https://openalex.org/W1992329416","https://openalex.org/W1995341919","https://openalex.org/W1998631319","https://openalex.org/W1998871699","https://openalex.org/W2002242662","https://openalex.org/W2002298104","https://openalex.org/W2005718191","https://openalex.org/W2011595584","https://openalex.org/W2028470267","https://openalex.org/W2033626294","https://openalex.org/W2042385018","https://openalex.org/W2050355460","https://openalex.org/W2050554833","https://openalex.org/W2060283413","https://openalex.org/W2074280444","https://openalex.org/W2075123415","https://openalex.org/W2076380105","https://openalex.org/W2087347434","https://openalex.org/W2097778810","https://openalex.org/W2098087167","https://openalex.org/W2103281268","https://openalex.org/W2104429154","https://openalex.org/W2113656253","https://openalex.org/W2114390083","https://openalex.org/W2120714068","https://openalex.org/W2121165284","https://openalex.org/W2124911115","https://openalex.org/W2128307328","https://openalex.org/W2129301079","https://openalex.org/W2130466489","https://openalex.org/W2130979155","https://openalex.org/W2133109597","https://openalex.org/W2144871646","https://openalex.org/W2147831097","https://openalex.org/W2149617981","https://openalex.org/W2149706766","https://openalex.org/W2151530263","https://openalex.org/W2152215973","https://openalex.org/W2153531907","https://openalex.org/W2153553763","https://openalex.org/W2153736474","https://openalex.org/W2154318396","https://openalex.org/W2155105414","https://openalex.org/W2155195660","https://openalex.org/W2155694597","https://openalex.org/W2161834244","https://openalex.org/W2162116192","https://openalex.org/W2164583936","https://openalex.org/W2169956614","https://openalex.org/W2177687027","https://openalex.org/W2203709713","https://openalex.org/W2280145546","https://openalex.org/W2289648221","https://openalex.org/W2294798173","https://openalex.org/W2471536124","https://openalex.org/W2498362352","https://openalex.org/W2504966124","https://openalex.org/W2568114456","https://openalex.org/W2731838812","https://openalex.org/W2905275465","https://openalex.org/W2912852260","https://openalex.org/W2947438142","https://openalex.org/W2959172998","https://openalex.org/W2960096041","https://openalex.org/W2961773029","https://openalex.org/W2969404966","https://openalex.org/W2981108399","https://openalex.org/W2997003451","https://openalex.org/W2999948429","https://openalex.org/W4205930639","https://openalex.org/W4211085285","https://openalex.org/W4212849804","https://openalex.org/W4232791906","https://openalex.org/W4233697739","https://openalex.org/W4236137412","https://openalex.org/W4285719527","https://openalex.org/W4288284977","https://openalex.org/W4294326454","https://openalex.org/W6601651205","https://openalex.org/W6619402555","https://openalex.org/W6629880869","https://openalex.org/W6639175750","https://openalex.org/W6639748728","https://openalex.org/W6682891771","https://openalex.org/W6694913562","https://openalex.org/W6696434600","https://openalex.org/W6765672703","https://openalex.org/W6765782036","https://openalex.org/W6766034015","https://openalex.org/W7043454694"],"related_works":["https://openalex.org/W2060045119","https://openalex.org/W4394773026","https://openalex.org/W2918066515","https://openalex.org/W4322505129","https://openalex.org/W2025716876","https://openalex.org/W3094431144","https://openalex.org/W4319028553","https://openalex.org/W2610803656","https://openalex.org/W3157194106","https://openalex.org/W2578850146"],"abstract_inverted_index":{"This":[0],"work":[1],"presents":[2],"a":[3,13,26,154],"scientific":[4,213],"data":[5,23,64,80,110,171,180,201,209],"mining":[6,81,111,181,202,210],"process":[7,32,82,99,146,191],"model":[8,33,100,147,192],"for":[9,18],"metabolomics":[10,22,45,63,72,92,113,157,167,200],"that":[11],"provides":[12],"systematic":[14],"and":[15,20,28,47,53,74,94,106,112,114,124,133,143,149,161,170,177,185,203],"formalised":[16],"framework":[17],"guiding":[19],"performing":[21],"analysis":[24],"in":[25,195,211],"justifiable":[27],"traceable":[29],"manner.":[30],"The":[31,98,190],"is":[34],"designed":[35],"to":[36,48,87,141,153,159,165,178,207],"promote":[37],"the":[38,41,50,60,68,76,88,104,120,145,188,197],"achievement":[39],"of":[40,44,55,62,71,78,91,108,156,199],"analytical":[42],"objectives":[43],"investigations":[46,93],"ensure":[49],"validity,":[51],"interpretability":[52],"reproducibility":[54],"their":[56],"results.":[57],"It":[58],"satisfies":[59],"requirements":[61,198],"mining,":[65],"focuses":[66],"on":[67,119,174,187],"contextual":[69],"meaning":[70],"knowledge,":[73],"addresses":[75],"shortcomings":[77],"existing":[79],"models,":[83],"while":[84],"paying":[85],"attention":[86],"practical":[89],"aspects":[90],"other":[95,212],"desirable":[96],"features.":[97],"development":[101],"involved":[102],"investigating":[103],"ontologies":[105],"standards":[107],"science,":[109],"its":[115,163],"design":[116],"was":[117,139,150,193],"based":[118],"principles,":[121],"best":[122],"practices":[123],"inspirations":[125],"from":[126],"Process":[127],"Engineering,":[128,130],"Software":[129],"Scientific":[131],"Methodology":[132],"Machine":[134],"Learning.":[135],"A":[136],"software":[137],"environment":[138],"built":[140],"realise":[142],"automate":[144],"execution":[148],"then":[151],"applied":[152],"number":[155],"datasets":[158],"demonstrate":[160],"evaluate":[162],"applicability":[164],"different":[166,179],"investigations,":[168],"approaches":[169],"acquisition":[172],"instruments":[173],"one":[175],"hand,":[176],"approaches,":[182],"goals,":[183],"tasks":[184],"techniques":[186],"other.":[189],"successful":[194],"satisfying":[196],"can":[204],"be":[205],"generalised":[206],"perform":[208],"disciplines.":[214]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":3},{"year":2022,"cited_by_count":10},{"year":2021,"cited_by_count":1}],"updated_date":"2026-06-11T09:08:48.828518","created_date":"2025-10-10T00:00:00"}