{"id":"https://openalex.org/W3047632937","doi":"https://doi.org/10.1109/access.2020.3015016","title":"SeQual: Big Data Tool to Perform Quality Control and Data Preprocessing of Large NGS Datasets","display_name":"SeQual: Big Data Tool to Perform Quality Control and Data Preprocessing of Large NGS Datasets","publication_year":2020,"publication_date":"2020-01-01","ids":{"openalex":"https://openalex.org/W3047632937","doi":"https://doi.org/10.1109/access.2020.3015016","mag":"3047632937"},"language":"en","primary_location":{"id":"doi:10.1109/access.2020.3015016","is_oa":true,"landing_page_url":"https://doi.org/10.1109/access.2020.3015016","pdf_url":"https://ieeexplore.ieee.org/ielx7/6287639/8948470/09162126.pdf","source":{"id":"https://openalex.org/S2485537415","display_name":"IEEE Access","issn_l":"2169-3536","issn":["2169-3536"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Access","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://ieeexplore.ieee.org/ielx7/6287639/8948470/09162126.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5066348145","display_name":"Roberto R. Exp\u00f3sito","orcid":"https://orcid.org/0000-0002-2077-1473"},"institutions":[{"id":"https://openalex.org/I11019714","display_name":"Universidade da Coru\u00f1a","ror":"https://ror.org/01qckj285","country_code":"ES","type":"education","lineage":["https://openalex.org/I11019714"]}],"countries":["ES"],"is_corresponding":true,"raw_author_name":"Roberto R. Exposito","raw_affiliation_strings":["Universidade da Coru\u00f1a, CITIC, Computer Architecture Group, A Coru\u00f1a, Spain"],"affiliations":[{"raw_affiliation_string":"Universidade da Coru\u00f1a, CITIC, Computer Architecture Group, A Coru\u00f1a, Spain","institution_ids":["https://openalex.org/I11019714"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5064823898","display_name":"Roi Galego-Torreiro","orcid":"https://orcid.org/0000-0002-3838-843X"},"institutions":[{"id":"https://openalex.org/I11019714","display_name":"Universidade da Coru\u00f1a","ror":"https://ror.org/01qckj285","country_code":"ES","type":"education","lineage":["https://openalex.org/I11019714"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Roi Galego-Torreiro","raw_affiliation_strings":["Universidade da Coru\u00f1a, CITIC, Computer Architecture Group, A Coru\u00f1a, Spain"],"affiliations":[{"raw_affiliation_string":"Universidade da Coru\u00f1a, CITIC, Computer Architecture Group, A Coru\u00f1a, Spain","institution_ids":["https://openalex.org/I11019714"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5008112601","display_name":"Jorge Gonz\u00e1lez\u2010Dom\u00ednguez","orcid":"https://orcid.org/0000-0002-2602-4874"},"institutions":[{"id":"https://openalex.org/I11019714","display_name":"Universidade da Coru\u00f1a","ror":"https://ror.org/01qckj285","country_code":"ES","type":"education","lineage":["https://openalex.org/I11019714"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Jorge Gonzalez-Dominguez","raw_affiliation_strings":["Universidade da Coru\u00f1a, CITIC, Computer Architecture Group, A Coru\u00f1a, Spain"],"affiliations":[{"raw_affiliation_string":"Universidade da Coru\u00f1a, CITIC, Computer Architecture Group, A Coru\u00f1a, Spain","institution_ids":["https://openalex.org/I11019714"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5066348145"],"corresponding_institution_ids":["https://openalex.org/I11019714"],"apc_list":{"value":1850,"currency":"USD","value_usd":1850},"apc_paid":{"value":1850,"currency":"USD","value_usd":1850},"fwci":3.6763,"has_fulltext":true,"cited_by_count":12,"citation_normalized_percentile":{"value":0.9457871,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":98},"biblio":{"volume":"8","issue":null,"first_page":"146075","last_page":"146084"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},"topics":[{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},{"id":"https://openalex.org/T10715","display_name":"Distributed and Parallel Computing Systems","score":0.9986000061035156,"subfield":{"id":"https://openalex.org/subfields/1705","display_name":"Computer Networks and Communications"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11801","display_name":"Reservoir Engineering and Simulation Methods","score":0.9689000248908997,"subfield":{"id":"https://openalex.org/subfields/2212","display_name":"Ocean Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.847602367401123},{"id":"https://openalex.org/keywords/big-data","display_name":"Big data","score":0.789050817489624},{"id":"https://openalex.org/keywords/preprocessor","display_name":"Preprocessor","score":0.5994642972946167},{"id":"https://openalex.org/keywords/data-quality","display_name":"Data quality","score":0.5408921241760254},{"id":"https://openalex.org/keywords/data-pre-processing","display_name":"Data pre-processing","score":0.5247928500175476},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.5014040470123291},{"id":"https://openalex.org/keywords/quality","display_name":"Quality (philosophy)","score":0.4786278307437897},{"id":"https://openalex.org/keywords/control","display_name":"Control (management)","score":0.41361871361732483},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.1856321394443512}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.847602367401123},{"id":"https://openalex.org/C75684735","wikidata":"https://www.wikidata.org/wiki/Q858810","display_name":"Big data","level":2,"score":0.789050817489624},{"id":"https://openalex.org/C34736171","wikidata":"https://www.wikidata.org/wiki/Q918333","display_name":"Preprocessor","level":2,"score":0.5994642972946167},{"id":"https://openalex.org/C24756922","wikidata":"https://www.wikidata.org/wiki/Q1757694","display_name":"Data quality","level":3,"score":0.5408921241760254},{"id":"https://openalex.org/C10551718","wikidata":"https://www.wikidata.org/wiki/Q5227332","display_name":"Data pre-processing","level":2,"score":0.5247928500175476},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.5014040470123291},{"id":"https://openalex.org/C2779530757","wikidata":"https://www.wikidata.org/wiki/Q1207505","display_name":"Quality (philosophy)","level":2,"score":0.4786278307437897},{"id":"https://openalex.org/C2775924081","wikidata":"https://www.wikidata.org/wiki/Q55608371","display_name":"Control (management)","level":2,"score":0.41361871361732483},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.1856321394443512},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0},{"id":"https://openalex.org/C21547014","wikidata":"https://www.wikidata.org/wiki/Q1423657","display_name":"Operations management","level":1,"score":0.0},{"id":"https://openalex.org/C176217482","wikidata":"https://www.wikidata.org/wiki/Q860554","display_name":"Metric (unit)","level":2,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0}],"mesh":[],"locations_count":4,"locations":[{"id":"doi:10.1109/access.2020.3015016","is_oa":true,"landing_page_url":"https://doi.org/10.1109/access.2020.3015016","pdf_url":"https://ieeexplore.ieee.org/ielx7/6287639/8948470/09162126.pdf","source":{"id":"https://openalex.org/S2485537415","display_name":"IEEE Access","issn_l":"2169-3536","issn":["2169-3536"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Access","raw_type":"journal-article"},{"id":"pmh:oai:dnet:ruc_________::f9a9a32895fe9d4425a665c74fab42e0","is_oa":true,"landing_page_url":"http://hdl.handle.net/2183/26270","pdf_url":null,"source":{"id":"https://openalex.org/S4306402641","display_name":"LA Referencia (Red Federada de Repositorios Institucionales de Publicaciones Cient\u00edficas)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4383465926","host_organization_name":"LA Referencia","host_organization_lineage":["https://openalex.org/I4383465926"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:doaj.org/article:3ae7677d3d4f4cb6a6d252fc7eb09294","is_oa":true,"landing_page_url":"https://doaj.org/article/3ae7677d3d4f4cb6a6d252fc7eb09294","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"IEEE Access, Vol 8, Pp 146075-146084 (2020)","raw_type":"article"},{"id":"pmh:oai:zenodo.org:10723472","is_oa":true,"landing_page_url":"https://hdl.handle.net/2183/26270","pdf_url":null,"source":{"id":"https://openalex.org/S4306400562","display_name":"Zenodo (CERN European Organization for Nuclear Research)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I67311998","host_organization_name":"European Organization for Nuclear Research","host_organization_lineage":["https://openalex.org/I67311998"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"IEEE Access, 8, 146075-146084, (2020-08-07)","raw_type":"info:eu-repo/semantics/article"}],"best_oa_location":{"id":"doi:10.1109/access.2020.3015016","is_oa":true,"landing_page_url":"https://doi.org/10.1109/access.2020.3015016","pdf_url":"https://ieeexplore.ieee.org/ielx7/6287639/8948470/09162126.pdf","source":{"id":"https://openalex.org/S2485537415","display_name":"IEEE Access","issn_l":"2169-3536","issn":["2169-3536"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Access","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1218400627","display_name":null,"funder_award_id":"2019-2022","funder_id":"https://openalex.org/F4320335598","funder_display_name":"Agencia Estatal de Investigaci\u00f3n"},{"id":"https://openalex.org/G1224945033","display_name":null,"funder_award_id":"FEDER","funder_id":"https://openalex.org/F4320322930","funder_display_name":"Ministerio de Ciencia e Innovaci\u00f3n"},{"id":"https://openalex.org/G1496055848","display_name":null,"funder_award_id":"ED431C","funder_id":"https://openalex.org/F4320326655","funder_display_name":"Xunta de Galicia"},{"id":"https://openalex.org/G1643641974","display_name":null,"funder_award_id":"AEI/FEDER","funder_id":"https://openalex.org/F4320335598","funder_display_name":"Agencia Estatal de Investigaci\u00f3n"},{"id":"https://openalex.org/G1650125035","display_name":null,"funder_award_id":"B-I00","funder_id":"https://openalex.org/F4320322930","funder_display_name":"Ministerio de Ciencia e Innovaci\u00f3n"},{"id":"https://openalex.org/G2262748287","display_name":null,"funder_award_id":"501100011033","funder_id":"https://openalex.org/F4320335598","funder_display_name":"Agencia Estatal de Investigaci\u00f3n"},{"id":"https://openalex.org/G230230324","display_name":null,"funder_award_id":"FEDER","funder_id":"https://openalex.org/F4320326655","funder_display_name":"Xunta de Galicia"},{"id":"https://openalex.org/G2309174360","display_name":null,"funder_award_id":"10.13039","funder_id":"https://openalex.org/F4320322930","funder_display_name":"Ministerio de Ciencia e Innovaci\u00f3n"},{"id":"https://openalex.org/G272322064","display_name":null,"funder_award_id":"ED431G 20","funder_id":"https://openalex.org/F4320326655","funder_display_name":"Xunta de Galicia"},{"id":"https://openalex.org/G300979063","display_name":null,"funder_award_id":"10.13039/501100011033","funder_id":"https://openalex.org/F4320335598","funder_display_name":"Agencia Estatal de Investigaci\u00f3n"},{"id":"https://openalex.org/G3025668325","display_name":null,"funder_award_id":"RB-I00","funder_id":"https://openalex.org/F4320335598","funder_display_name":"Agencia Estatal de Investigaci\u00f3n"},{"id":"https://openalex.org/G3480869486","display_name":null,"funder_award_id":"13039","funder_id":"https://openalex.org/F4320335598","funder_display_name":"Agencia Estatal de Investigaci\u00f3n"},{"id":"https://openalex.org/G3549333136","display_name":null,"funder_award_id":"TIN2016-75845-P","funder_id":"https://openalex.org/F4320322930","funder_display_name":"Ministerio de Ciencia e Innovaci\u00f3n"},{"id":"https://openalex.org/G3690828678","display_name":null,"funder_award_id":"PID2019","funder_id":"https://openalex.org/F4320322930","funder_display_name":"Ministerio de Ciencia e Innovaci\u00f3n"},{"id":"https://openalex.org/G3876637791","display_name":null,"funder_award_id":"ED431G","funder_id":"https://openalex.org/F4320326655","funder_display_name":"Xunta de Galicia"},{"id":"https://openalex.org/G4126322094","display_name":null,"funder_award_id":"01100011033","funder_id":"https://openalex.org/F4320335598","funder_display_name":"Agencia Estatal de Investigaci\u00f3n"},{"id":"https://openalex.org/G4816244515","display_name":null,"funder_award_id":"FEDER","funder_id":"https://openalex.org/F4320335598","funder_display_name":"Agencia Estatal de Investigaci\u00f3n"},{"id":"https://openalex.org/G4912030886","display_name":null,"funder_award_id":"2019-2022","funder_id":"https://openalex.org/F4320326655","funder_display_name":"Xunta de Galicia"},{"id":"https://openalex.org/G5042533015","display_name":null,"funder_award_id":"AEI/FEDER","funder_id":"https://openalex.org/F4320322930","funder_display_name":"Ministerio de Ciencia e Innovaci\u00f3n"},{"id":"https://openalex.org/G5080475149","display_name":null,"funder_award_id":"10.13039","funder_id":"https://openalex.org/F4320335598","funder_display_name":"Agencia Estatal de Investigaci\u00f3n"},{"id":"https://openalex.org/G5136360197","display_name":null,"funder_award_id":"ED431C 2017/04","funder_id":"https://openalex.org/F4320326655","funder_display_name":"Xunta de Galicia"},{"id":"https://openalex.org/G5421974903","display_name":null,"funder_award_id":"501100011033","funder_id":"https://openalex.org/F4320322930","funder_display_name":"Ministerio de Ciencia e Innovaci\u00f3n"},{"id":"https://openalex.org/G5589930466","display_name":null,"funder_award_id":"2019-20","funder_id":"https://openalex.org/F4320322930","funder_display_name":"Ministerio de Ciencia e Innovaci\u00f3n"},{"id":"https://openalex.org/G6056837937","display_name":null,"funder_award_id":"PID2019-104184RB-I00","funder_id":"https://openalex.org/F4320322930","funder_display_name":"Ministerio de Ciencia e Innovaci\u00f3n"},{"id":"https://openalex.org/G6414947460","display_name":null,"funder_award_id":"FEDER f","funder_id":"https://openalex.org/F4320322930","funder_display_name":"Ministerio de Ciencia e Innovaci\u00f3n"},{"id":"https://openalex.org/G661330594","display_name":null,"funder_award_id":"00110","funder_id":"https://openalex.org/F4320335598","funder_display_name":"Agencia Estatal de Investigaci\u00f3n"},{"id":"https://openalex.org/G6685425346","display_name":null,"funder_award_id":"0011033","funder_id":"https://openalex.org/F4320335598","funder_display_name":"Agencia Estatal de Investigaci\u00f3n"},{"id":"https://openalex.org/G7214596439","display_name":null,"funder_award_id":"2017/0","funder_id":"https://openalex.org/F4320326655","funder_display_name":"Xunta de Galicia"},{"id":"https://openalex.org/G7224627388","display_name":null,"funder_award_id":"ED431","funder_id":"https://openalex.org/F4320326655","funder_display_name":"Xunta de Galicia"},{"id":"https://openalex.org/G726424357","display_name":null,"funder_award_id":"ED431G 2019/01","funder_id":"https://openalex.org/F4320326655","funder_display_name":"Xunta de Galicia"},{"id":"https://openalex.org/G7266728691","display_name":null,"funder_award_id":"13039/501100011033","funder_id":"https://openalex.org/F4320335598","funder_display_name":"Agencia Estatal de Investigaci\u00f3n"},{"id":"https://openalex.org/G7643708868","display_name":null,"funder_award_id":"10.13039/501100011033","funder_id":"https://openalex.org/F4320322930","funder_display_name":"Ministerio de Ciencia e Innovaci\u00f3n"},{"id":"https://openalex.org/G801766868","display_name":null,"funder_award_id":"ED431G 2019/0","funder_id":"https://openalex.org/F4320326655","funder_display_name":"Xunta de Galicia"},{"id":"https://openalex.org/G8055432103","display_name":null,"funder_award_id":"13039/501100011033","funder_id":"https://openalex.org/F4320322930","funder_display_name":"Ministerio de Ciencia e Innovaci\u00f3n"},{"id":"https://openalex.org/G8260616629","display_name":null,"funder_award_id":"011033","funder_id":"https://openalex.org/F4320335598","funder_display_name":"Agencia Estatal de Investigaci\u00f3n"},{"id":"https://openalex.org/G8352492595","display_name":null,"funder_award_id":"0.13039/501100011033","funder_id":"https://openalex.org/F4320322930","funder_display_name":"Ministerio de Ciencia e Innovaci\u00f3n"},{"id":"https://openalex.org/G8638682022","display_name":null,"funder_award_id":"10.13039/50110001103","funder_id":"https://openalex.org/F4320335598","funder_display_name":"Agencia Estatal de Investigaci\u00f3n"},{"id":"https://openalex.org/G8684520763","display_name":null,"funder_award_id":"PID2019","funder_id":"https://openalex.org/F4320335598","funder_display_name":"Agencia Estatal de Investigaci\u00f3n"}],"funders":[{"id":"https://openalex.org/F4320322930","display_name":"Ministerio de Ciencia e Innovaci\u00f3n","ror":"https://ror.org/034900433"},{"id":"https://openalex.org/F4320326655","display_name":"Xunta de Galicia","ror":"https://ror.org/0181xnw06"},{"id":"https://openalex.org/F4320335598","display_name":"Agencia Estatal de Investigaci\u00f3n","ror":null}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3047632937.pdf","grobid_xml":"https://content.openalex.org/works/W3047632937.grobid-xml"},"referenced_works_count":49,"referenced_works":["https://openalex.org/W1904861952","https://openalex.org/W1968458420","https://openalex.org/W1977046764","https://openalex.org/W1980184764","https://openalex.org/W2004908131","https://openalex.org/W2051486134","https://openalex.org/W2061338306","https://openalex.org/W2078962046","https://openalex.org/W2079958213","https://openalex.org/W2082447166","https://openalex.org/W2096525273","https://openalex.org/W2119738171","https://openalex.org/W2121180999","https://openalex.org/W2131271579","https://openalex.org/W2131975293","https://openalex.org/W2163430637","https://openalex.org/W2165446840","https://openalex.org/W2168440186","https://openalex.org/W2173213060","https://openalex.org/W2190012392","https://openalex.org/W2202066302","https://openalex.org/W2213505663","https://openalex.org/W2267954589","https://openalex.org/W2269030879","https://openalex.org/W2286261512","https://openalex.org/W2398924165","https://openalex.org/W2542459869","https://openalex.org/W2555726678","https://openalex.org/W2566979091","https://openalex.org/W2598066557","https://openalex.org/W2601152038","https://openalex.org/W2609766012","https://openalex.org/W2610251765","https://openalex.org/W2784039699","https://openalex.org/W2885512449","https://openalex.org/W2888736662","https://openalex.org/W2903458588","https://openalex.org/W2946169500","https://openalex.org/W2949996247","https://openalex.org/W2951269101","https://openalex.org/W2952726084","https://openalex.org/W2966854986","https://openalex.org/W2983055179","https://openalex.org/W3008221215","https://openalex.org/W4245803912","https://openalex.org/W6679815717","https://openalex.org/W6730256100","https://openalex.org/W6731596640","https://openalex.org/W6763003298"],"related_works":["https://openalex.org/W2989490741","https://openalex.org/W3092506759","https://openalex.org/W2367545121","https://openalex.org/W4248881655","https://openalex.org/W2482165163","https://openalex.org/W3010890513","https://openalex.org/W2952736244","https://openalex.org/W138569904","https://openalex.org/W3021414116","https://openalex.org/W176219849"],"abstract_inverted_index":{"This":[0],"paper":[1],"presents":[2],"SeQual,":[3],"a":[4,46,105],"scalable":[5,85],"tool":[6,17],"to":[7,33,39,64,89,98],"efficiently":[8],"perform":[9],"quality":[10],"control":[11],"of":[12,60],"large":[13],"genomic":[14],"datasets.":[15],"Our":[16,84],"currently":[18],"supports":[19],"more":[20,94],"than":[21,95,100],"30":[22],"different":[23],"operations":[24],"(e.g.,":[25],"filtering,":[26],"trimming,":[27],"formatting)":[28],"that":[29],"can":[30],"be":[31],"applied":[32],"DNA/RNA":[34],"reads":[35,111],"in":[36],"FASTQ/FASTA":[37],"formats":[38],"improve":[40],"subsequent":[41],"downstream":[42],"analyses,":[43],"while":[44],"providing":[45],"simple":[47],"and":[48],"user-friendly":[49],"graphical":[50],"interface":[51],"for":[52],"non-expert":[53],"users.":[54],"Furthermore,":[55],"SeQual":[56],"takes":[57],"full":[58],"advantage":[59],"Big":[61],"Data":[62],"technologies":[63],"process":[65],"massive":[66],"datasets":[67],"on":[68,76,115],"distributed-memory":[69],"systems":[70],"such":[71],"as":[72],"clusters":[73],"by":[74],"relying":[75],"the":[77,91],"open-source":[78],"Apache":[79],"Spark":[80],"cluster":[81],"computing":[82],"framework.":[83],"Spark-based":[86],"implementation":[87],"allows":[88],"reduce":[90],"runtime":[92],"from":[93],"three":[96],"hours":[97],"less":[99],"20":[101],"minutes":[102],"when":[103],"processing":[104],"paired-end":[106],"dataset":[107],"with":[108],"251":[109],"million":[110],"per":[112],"input":[113],"file":[114],"an":[116],"8-node":[117],"multi-core":[118],"cluster.":[119]},"counts_by_year":[{"year":2025,"cited_by_count":3},{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":4},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":2}],"updated_date":"2026-04-16T08:26:57.006410","created_date":"2025-10-10T00:00:00"}
