{"id":"https://openalex.org/W3000953558","doi":"https://doi.org/10.1109/access.2020.2968535","title":"Molecular Property Prediction Based on a Multichannel Substructure Graph","display_name":"Molecular Property Prediction Based on a Multichannel Substructure Graph","publication_year":2020,"publication_date":"2020-01-01","ids":{"openalex":"https://openalex.org/W3000953558","doi":"https://doi.org/10.1109/access.2020.2968535","mag":"3000953558"},"language":"en","primary_location":{"id":"doi:10.1109/access.2020.2968535","is_oa":true,"landing_page_url":"https://doi.org/10.1109/access.2020.2968535","pdf_url":"https://ieeexplore.ieee.org/ielx7/6287639/8948470/08964313.pdf","source":{"id":"https://openalex.org/S2485537415","display_name":"IEEE Access","issn_l":"2169-3536","issn":["2169-3536"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Access","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://ieeexplore.ieee.org/ielx7/6287639/8948470/08964313.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100375587","display_name":"Shuang Wang","orcid":"https://orcid.org/0000-0002-6779-9537"},"institutions":[{"id":"https://openalex.org/I59028903","display_name":"Ocean University of China","ror":"https://ror.org/04rdtx186","country_code":"CN","type":"education","lineage":["https://openalex.org/I59028903"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Shuang Wang","raw_affiliation_strings":["Department of Computer Science and Technology, Ocean University of China, Qingdao, China"],"raw_orcid":"https://orcid.org/0000-0002-6779-9537","affiliations":[{"raw_affiliation_string":"Department of Computer Science and Technology, Ocean University of China, Qingdao, China","institution_ids":["https://openalex.org/I59028903"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100680995","display_name":"Zhen Li","orcid":"https://orcid.org/0000-0001-5093-4221"},"institutions":[{"id":"https://openalex.org/I59028903","display_name":"Ocean University of China","ror":"https://ror.org/04rdtx186","country_code":"CN","type":"education","lineage":["https://openalex.org/I59028903"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zhen Li","raw_affiliation_strings":["Department of Computer Science and Technology, Ocean University of China, Qingdao, China"],"raw_orcid":"https://orcid.org/0000-0001-5093-4221","affiliations":[{"raw_affiliation_string":"Department of Computer Science and Technology, Ocean University of China, Qingdao, China","institution_ids":["https://openalex.org/I59028903"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101822148","display_name":"Shugang Zhang","orcid":"https://orcid.org/0000-0002-9774-9709"},"institutions":[{"id":"https://openalex.org/I59028903","display_name":"Ocean University of China","ror":"https://ror.org/04rdtx186","country_code":"CN","type":"education","lineage":["https://openalex.org/I59028903"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Shugang Zhang","raw_affiliation_strings":["Department of Computer Science and Technology, Ocean University of China, Qingdao, China"],"raw_orcid":"https://orcid.org/0000-0002-9774-9709","affiliations":[{"raw_affiliation_string":"Department of Computer Science and Technology, Ocean University of China, Qingdao, China","institution_ids":["https://openalex.org/I59028903"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5076937227","display_name":"Mingjian Jiang","orcid":"https://orcid.org/0000-0002-0716-5292"},"institutions":[{"id":"https://openalex.org/I59028903","display_name":"Ocean University of China","ror":"https://ror.org/04rdtx186","country_code":"CN","type":"education","lineage":["https://openalex.org/I59028903"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Mingjian Jiang","raw_affiliation_strings":["Department of Computer Science and Technology, Ocean University of China, Qingdao, China"],"raw_orcid":"https://orcid.org/0000-0002-0716-5292","affiliations":[{"raw_affiliation_string":"Department of Computer Science and Technology, Ocean University of China, Qingdao, China","institution_ids":["https://openalex.org/I59028903"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Xiaofeng Wang","orcid":"https://orcid.org/0000-0001-7042-1773"},"institutions":[{"id":"https://openalex.org/I59028903","display_name":"Ocean University of China","ror":"https://ror.org/04rdtx186","country_code":"CN","type":"education","lineage":["https://openalex.org/I59028903"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xiaofeng Wang","raw_affiliation_strings":["Department of Computer Science and Technology, Ocean University of China, Qingdao, China"],"raw_orcid":"https://orcid.org/0000-0001-7042-1773","affiliations":[{"raw_affiliation_string":"Department of Computer Science and Technology, Ocean University of China, Qingdao, China","institution_ids":["https://openalex.org/I59028903"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5079932099","display_name":"Zhiqiang Wei","orcid":"https://orcid.org/0000-0002-2830-8301"},"institutions":[{"id":"https://openalex.org/I59028903","display_name":"Ocean University of China","ror":"https://ror.org/04rdtx186","country_code":"CN","type":"education","lineage":["https://openalex.org/I59028903"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zhiqiang Wei","raw_affiliation_strings":["Department of Computer Science and Technology, Ocean University of China, Qingdao, China"],"raw_orcid":"https://orcid.org/0000-0002-2830-8301","affiliations":[{"raw_affiliation_string":"Department of Computer Science and Technology, Ocean University of China, Qingdao, China","institution_ids":["https://openalex.org/I59028903"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I59028903"],"apc_list":{"value":1850,"currency":"USD","value_usd":1850},"apc_paid":{"value":1850,"currency":"USD","value_usd":1850},"fwci":3.2058,"has_fulltext":true,"cited_by_count":29,"citation_normalized_percentile":{"value":0.93268943,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":96,"max":98},"biblio":{"volume":"8","issue":null,"first_page":"18601","last_page":"18614"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11948","display_name":"Machine Learning in Materials Science","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/2505","display_name":"Materials Chemistry"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9871000051498413,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7495588660240173},{"id":"https://openalex.org/keywords/generalizability-theory","display_name":"Generalizability theory","score":0.7296966314315796},{"id":"https://openalex.org/keywords/molecular-graph","display_name":"Molecular graph","score":0.7293051481246948},{"id":"https://openalex.org/keywords/robustness","display_name":"Robustness (evolution)","score":0.6475560069084167},{"id":"https://openalex.org/keywords/substructure","display_name":"Substructure","score":0.5773999691009521},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.5489698648452759},{"id":"https://openalex.org/keywords/property","display_name":"Property (philosophy)","score":0.5145056247711182},{"id":"https://openalex.org/keywords/benchmark","display_name":"Benchmark (surveying)","score":0.5005130767822266},{"id":"https://openalex.org/keywords/graph","display_name":"Graph","score":0.49455925822257996},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.3730742931365967},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.3579891324043274},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.31637319922447205},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.12365767359733582},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.08752396702766418}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7495588660240173},{"id":"https://openalex.org/C27158222","wikidata":"https://www.wikidata.org/wiki/Q5532422","display_name":"Generalizability theory","level":2,"score":0.7296966314315796},{"id":"https://openalex.org/C2780022179","wikidata":"https://www.wikidata.org/wiki/Q1986794","display_name":"Molecular graph","level":3,"score":0.7293051481246948},{"id":"https://openalex.org/C63479239","wikidata":"https://www.wikidata.org/wiki/Q7353546","display_name":"Robustness (evolution)","level":3,"score":0.6475560069084167},{"id":"https://openalex.org/C99679407","wikidata":"https://www.wikidata.org/wiki/Q56761637","display_name":"Substructure","level":2,"score":0.5773999691009521},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5489698648452759},{"id":"https://openalex.org/C189950617","wikidata":"https://www.wikidata.org/wiki/Q937228","display_name":"Property (philosophy)","level":2,"score":0.5145056247711182},{"id":"https://openalex.org/C185798385","wikidata":"https://www.wikidata.org/wiki/Q1161707","display_name":"Benchmark (surveying)","level":2,"score":0.5005130767822266},{"id":"https://openalex.org/C132525143","wikidata":"https://www.wikidata.org/wiki/Q141488","display_name":"Graph","level":2,"score":0.49455925822257996},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.3730742931365967},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.3579891324043274},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.31637319922447205},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.12365767359733582},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.08752396702766418},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.0},{"id":"https://openalex.org/C13280743","wikidata":"https://www.wikidata.org/wiki/Q131089","display_name":"Geodesy","level":1,"score":0.0},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C205649164","wikidata":"https://www.wikidata.org/wiki/Q1071","display_name":"Geography","level":0,"score":0.0},{"id":"https://openalex.org/C66938386","wikidata":"https://www.wikidata.org/wiki/Q633538","display_name":"Structural engineering","level":1,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1109/access.2020.2968535","is_oa":true,"landing_page_url":"https://doi.org/10.1109/access.2020.2968535","pdf_url":"https://ieeexplore.ieee.org/ielx7/6287639/8948470/08964313.pdf","source":{"id":"https://openalex.org/S2485537415","display_name":"IEEE Access","issn_l":"2169-3536","issn":["2169-3536"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Access","raw_type":"journal-article"},{"id":"pmh:oai:doaj.org/article:e43c5c1588c0481e8da858ce8e290028","is_oa":true,"landing_page_url":"https://doaj.org/article/e43c5c1588c0481e8da858ce8e290028","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"IEEE Access, Vol 8, Pp 18601-18614 (2020)","raw_type":"article"}],"best_oa_location":{"id":"doi:10.1109/access.2020.2968535","is_oa":true,"landing_page_url":"https://doi.org/10.1109/access.2020.2968535","pdf_url":"https://ieeexplore.ieee.org/ielx7/6287639/8948470/08964313.pdf","source":{"id":"https://openalex.org/S2485537415","display_name":"IEEE Access","issn_l":"2169-3536","issn":["2169-3536"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Access","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G7241976952","display_name":null,"funder_award_id":"2018SDKJ0402","funder_id":"https://openalex.org/F4320326721","funder_display_name":"Qingdao National Laboratory for Marine Science and Technology"}],"funders":[{"id":"https://openalex.org/F4320326721","display_name":"Qingdao National Laboratory for Marine Science and Technology","ror":null},{"id":"https://openalex.org/F4320328788","display_name":"Polit National Laboratory for Marine Science and Technology","ror":null}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3000953558.pdf","grobid_xml":"https://content.openalex.org/works/W3000953558.grobid-xml"},"referenced_works_count":79,"referenced_works":["https://openalex.org/W179875071","https://openalex.org/W1522301498","https://openalex.org/W1678356000","https://openalex.org/W1738019091","https://openalex.org/W1887369574","https://openalex.org/W1975147762","https://openalex.org/W1988037271","https://openalex.org/W1993046136","https://openalex.org/W1993285168","https://openalex.org/W2008505552","https://openalex.org/W2010700988","https://openalex.org/W2024046085","https://openalex.org/W2038702914","https://openalex.org/W2046589863","https://openalex.org/W2060531713","https://openalex.org/W2076498053","https://openalex.org/W2092285329","https://openalex.org/W2107183338","https://openalex.org/W2116341502","https://openalex.org/W2130942839","https://openalex.org/W2200017991","https://openalex.org/W2290847742","https://openalex.org/W2377801650","https://openalex.org/W2406943157","https://openalex.org/W2461470610","https://openalex.org/W2558999090","https://openalex.org/W2583907533","https://openalex.org/W2594183968","https://openalex.org/W2605659599","https://openalex.org/W2606780347","https://openalex.org/W2610646689","https://openalex.org/W2734982589","https://openalex.org/W2735246657","https://openalex.org/W2786722833","https://openalex.org/W2787740662","https://openalex.org/W2793980075","https://openalex.org/W2804115458","https://openalex.org/W2805516822","https://openalex.org/W2806115886","https://openalex.org/W2807021761","https://openalex.org/W2809583854","https://openalex.org/W2883583109","https://openalex.org/W2890610025","https://openalex.org/W2895884529","https://openalex.org/W2901078833","https://openalex.org/W2911964244","https://openalex.org/W2919115771","https://openalex.org/W2923928745","https://openalex.org/W2942831497","https://openalex.org/W2943890584","https://openalex.org/W2949095042","https://openalex.org/W2950898568","https://openalex.org/W2955251621","https://openalex.org/W2962779575","https://openalex.org/W2962810718","https://openalex.org/W2963165299","https://openalex.org/W2964015378","https://openalex.org/W2964113829","https://openalex.org/W2995345309","https://openalex.org/W3100157108","https://openalex.org/W3100848837","https://openalex.org/W4239510810","https://openalex.org/W4297733535","https://openalex.org/W4385245566","https://openalex.org/W6607333740","https://openalex.org/W6631190155","https://openalex.org/W6637865168","https://openalex.org/W6679436768","https://openalex.org/W6685350579","https://openalex.org/W6690815549","https://openalex.org/W6726873649","https://openalex.org/W6736685754","https://openalex.org/W6739901393","https://openalex.org/W6747927160","https://openalex.org/W6748402259","https://openalex.org/W6751606814","https://openalex.org/W6751796012","https://openalex.org/W6752306858","https://openalex.org/W6760813107"],"related_works":["https://openalex.org/W2118717649","https://openalex.org/W2413243053","https://openalex.org/W410723623","https://openalex.org/W2015341305","https://openalex.org/W2035068594","https://openalex.org/W4225593417","https://openalex.org/W2573498121","https://openalex.org/W3022298670","https://openalex.org/W3160494304","https://openalex.org/W2388888344"],"abstract_inverted_index":{"Molecular":[0],"property":[1,121],"prediction":[2,122],"is":[3,37],"important":[4],"to":[5,47,50,82,89,99,105,112],"drug":[6],"design.":[7],"With":[8],"the":[9,56,63,84,91,100,103,130],"development":[10],"of":[11],"artificial":[12],"intelligence,":[13],"deep":[14],"learning":[15],"methods":[16],"are":[17,60,80,97,110],"effective":[18],"for":[19,69,123],"extracting":[20],"molecular":[21,48,58,92,120],"features.":[22],"In":[23,55,75],"this":[24],"paper,":[25],"we":[26],"propose":[27],"a":[28,38],"multichannel":[29],"substructure-graph":[30],"gated":[31],"recurrent":[32],"unit":[33],"(GRU)":[34],"architecture,":[35,57],"which":[36],"novel":[39],"GRU-based":[40],"neural":[41],"network":[42],"with":[43,116],"attention":[44,95],"mechanisms":[45],"applied":[46],"substructures":[49],"learn":[51],"and":[52,66,72,126,129,139],"predict":[53],"properties.":[54],"features":[59,85],"extracted":[61],"at":[62],"node":[64],"level":[65,68],"molecule":[67,104],"capturing":[70],"fine-grained":[71],"coarse-grained":[73],"information.":[74],"addition,":[76],"three":[77,87],"bidirectional":[78],"GRUs":[79],"adopted":[81],"extract":[83],"on":[86],"channels":[88],"generate":[90],"representations.":[93],"Different":[94],"weights":[96],"assigned":[98],"entities":[101],"in":[102,119],"evaluate":[106],"their":[107],"contributions.":[108],"Experiments":[109],"implemented":[111],"compare":[113],"our":[114,134],"model":[115,135],"benchmark":[117],"models":[118],"both":[124],"regression":[125],"classification":[127],"tasks,":[128],"results":[131],"show":[132],"that":[133],"has":[136],"strong":[137],"robustness":[138],"generalizability.":[140]},"counts_by_year":[{"year":2025,"cited_by_count":4},{"year":2024,"cited_by_count":3},{"year":2023,"cited_by_count":4},{"year":2022,"cited_by_count":6},{"year":2021,"cited_by_count":7},{"year":2020,"cited_by_count":5}],"updated_date":"2026-06-26T08:34:08.712188","created_date":"2025-10-10T00:00:00"}
