{"id":"https://openalex.org/W2997523705","doi":"https://doi.org/10.1109/access.2019.2962319","title":"EGBIOIMAGE: A Software Tool for Gel Images Analysis and Hierarchical Clustering","display_name":"EGBIOIMAGE: A Software Tool for Gel Images Analysis and Hierarchical Clustering","publication_year":2020,"publication_date":"2020-01-01","ids":{"openalex":"https://openalex.org/W2997523705","doi":"https://doi.org/10.1109/access.2019.2962319","mag":"2997523705"},"language":"en","primary_location":{"id":"doi:10.1109/access.2019.2962319","is_oa":true,"landing_page_url":"https://doi.org/10.1109/access.2019.2962319","pdf_url":"https://ieeexplore.ieee.org/ielx7/6287639/8948470/08949815.pdf","source":{"id":"https://openalex.org/S2485537415","display_name":"IEEE Access","issn_l":"2169-3536","issn":["2169-3536"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Access","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://ieeexplore.ieee.org/ielx7/6287639/8948470/08949815.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5081721393","display_name":"Mahmoud H. Alnamoly","orcid":"https://orcid.org/0000-0001-8606-6788"},"institutions":[{"id":"https://openalex.org/I192398990","display_name":"Zagazig University","ror":"https://ror.org/053g6we49","country_code":"EG","type":"education","lineage":["https://openalex.org/I192398990"]}],"countries":["EG"],"is_corresponding":true,"raw_author_name":"Mahmoud H. Alnamoly","raw_affiliation_strings":["Computer Science Department, Faculty of Computers and Informatics, Zagazig University, Zagazig, Egypt"],"raw_orcid":"https://orcid.org/0000-0001-8606-6788","affiliations":[{"raw_affiliation_string":"Computer Science Department, Faculty of Computers and Informatics, Zagazig University, Zagazig, Egypt","institution_ids":["https://openalex.org/I192398990"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5036313467","display_name":"Ahmed M. Alzohairy","orcid":"https://orcid.org/0000-0003-1737-8184"},"institutions":[{"id":"https://openalex.org/I192398990","display_name":"Zagazig University","ror":"https://ror.org/053g6we49","country_code":"EG","type":"education","lineage":["https://openalex.org/I192398990"]}],"countries":["EG"],"is_corresponding":false,"raw_author_name":"Ahmed Mansour Alzohairy","raw_affiliation_strings":["Genetics Department, Faculty of agriculture, Zagazig University, Zagazig, Egypt"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Genetics Department, Faculty of agriculture, Zagazig University, Zagazig, Egypt","institution_ids":["https://openalex.org/I192398990"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5045379886","display_name":"Ibrahim Elhenawy","orcid":"https://orcid.org/0000-0001-5191-5671"},"institutions":[{"id":"https://openalex.org/I192398990","display_name":"Zagazig University","ror":"https://ror.org/053g6we49","country_code":"EG","type":"education","lineage":["https://openalex.org/I192398990"]}],"countries":["EG"],"is_corresponding":false,"raw_author_name":"Ibrahim Mahmoud El-Henawy","raw_affiliation_strings":["Computer Science Department, Faculty of Computers and Informatics, Zagazig University, Zagazig, Egypt"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Computer Science Department, Faculty of Computers and Informatics, Zagazig University, Zagazig, Egypt","institution_ids":["https://openalex.org/I192398990"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5081721393"],"corresponding_institution_ids":["https://openalex.org/I192398990"],"apc_list":{"value":1850,"currency":"USD","value_usd":1850},"apc_paid":{"value":1850,"currency":"USD","value_usd":1850},"fwci":0.2501,"has_fulltext":true,"cited_by_count":7,"citation_normalized_percentile":{"value":0.52426381,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"8","issue":null,"first_page":"10768","last_page":"10781"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T13937","display_name":"Genetics, Bioinformatics, and Biomedical Research","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T13937","display_name":"Genetics, Bioinformatics, and Biomedical Research","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9829000234603882,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12946","display_name":"Fractal and DNA sequence analysis","score":0.9710000157356262,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.6802610158920288},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6775290369987488},{"id":"https://openalex.org/keywords/cluster-analysis","display_name":"Cluster analysis","score":0.601983904838562},{"id":"https://openalex.org/keywords/upload","display_name":"Upload","score":0.6014177799224854},{"id":"https://openalex.org/keywords/upgma","display_name":"UPGMA","score":0.5966603755950928},{"id":"https://openalex.org/keywords/tree","display_name":"Tree (set theory)","score":0.5258448719978333},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.45988190174102783},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.44109925627708435},{"id":"https://openalex.org/keywords/matching","display_name":"Matching (statistics)","score":0.43721070885658264},{"id":"https://openalex.org/keywords/image","display_name":"Image (mathematics)","score":0.41938158869743347},{"id":"https://openalex.org/keywords/phylogenetic-tree","display_name":"Phylogenetic tree","score":0.41586828231811523},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.33129826188087463},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.22229894995689392},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.1537342369556427},{"id":"https://openalex.org/keywords/combinatorics","display_name":"Combinatorics","score":0.11245599389076233}],"concepts":[{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.6802610158920288},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6775290369987488},{"id":"https://openalex.org/C73555534","wikidata":"https://www.wikidata.org/wiki/Q622825","display_name":"Cluster analysis","level":2,"score":0.601983904838562},{"id":"https://openalex.org/C71901391","wikidata":"https://www.wikidata.org/wiki/Q7126699","display_name":"Upload","level":2,"score":0.6014177799224854},{"id":"https://openalex.org/C194898557","wikidata":"https://www.wikidata.org/wiki/Q1779497","display_name":"UPGMA","level":4,"score":0.5966603755950928},{"id":"https://openalex.org/C113174947","wikidata":"https://www.wikidata.org/wiki/Q2859736","display_name":"Tree (set theory)","level":2,"score":0.5258448719978333},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.45988190174102783},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.44109925627708435},{"id":"https://openalex.org/C165064840","wikidata":"https://www.wikidata.org/wiki/Q1321061","display_name":"Matching (statistics)","level":2,"score":0.43721070885658264},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.41938158869743347},{"id":"https://openalex.org/C193252679","wikidata":"https://www.wikidata.org/wiki/Q242125","display_name":"Phylogenetic tree","level":3,"score":0.41586828231811523},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.33129826188087463},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.22229894995689392},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.1537342369556427},{"id":"https://openalex.org/C114614502","wikidata":"https://www.wikidata.org/wiki/Q76592","display_name":"Combinatorics","level":1,"score":0.11245599389076233},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0},{"id":"https://openalex.org/C135763542","wikidata":"https://www.wikidata.org/wiki/Q106016","display_name":"Genotype","level":3,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1109/access.2019.2962319","is_oa":true,"landing_page_url":"https://doi.org/10.1109/access.2019.2962319","pdf_url":"https://ieeexplore.ieee.org/ielx7/6287639/8948470/08949815.pdf","source":{"id":"https://openalex.org/S2485537415","display_name":"IEEE Access","issn_l":"2169-3536","issn":["2169-3536"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Access","raw_type":"journal-article"},{"id":"pmh:oai:doaj.org/article:780bea45076043649778ae43d97f5a9e","is_oa":true,"landing_page_url":"https://doaj.org/article/780bea45076043649778ae43d97f5a9e","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"IEEE Access, Vol 8, Pp 10768-10781 (2020)","raw_type":"article"}],"best_oa_location":{"id":"doi:10.1109/access.2019.2962319","is_oa":true,"landing_page_url":"https://doi.org/10.1109/access.2019.2962319","pdf_url":"https://ieeexplore.ieee.org/ielx7/6287639/8948470/08949815.pdf","source":{"id":"https://openalex.org/S2485537415","display_name":"IEEE Access","issn_l":"2169-3536","issn":["2169-3536"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Access","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2997523705.pdf","grobid_xml":"https://content.openalex.org/works/W2997523705.grobid-xml"},"referenced_works_count":24,"referenced_works":["https://openalex.org/W1159302035","https://openalex.org/W1537651792","https://openalex.org/W1970168820","https://openalex.org/W1977455827","https://openalex.org/W1988971521","https://openalex.org/W1990734057","https://openalex.org/W2020883978","https://openalex.org/W2073751678","https://openalex.org/W2076362771","https://openalex.org/W2077345813","https://openalex.org/W2133047124","https://openalex.org/W2146186421","https://openalex.org/W2160693392","https://openalex.org/W2161586009","https://openalex.org/W2171367852","https://openalex.org/W2216918991","https://openalex.org/W2280181579","https://openalex.org/W2286471756","https://openalex.org/W2310436900","https://openalex.org/W2763453633","https://openalex.org/W2799556914","https://openalex.org/W3103755862","https://openalex.org/W6681616549","https://openalex.org/W6750854304"],"related_works":["https://openalex.org/W2388816175","https://openalex.org/W3003858429","https://openalex.org/W2187276324","https://openalex.org/W2356456573","https://openalex.org/W2900625899","https://openalex.org/W2389266426","https://openalex.org/W2362218761","https://openalex.org/W2062354928","https://openalex.org/W2113708670","https://openalex.org/W2088120817"],"abstract_inverted_index":{"This":[0,82],"paper":[1],"presents":[2],"a":[3,93,170,185,218],"novel":[4],"software":[5,83,244,251],"called":[6],"EGBioImage":[7,168,205,282],"that":[8,109,176,252],"is":[9,84,239,283],"implemented":[10],"for":[11,285],"analyzing":[12],"gel":[13,51,66,186,215,265],"Electrophoresis":[14],"images,":[15],"computing":[16],"the":[17,21,24,28,31,34,50,55,60,64,111,116,128,132,157,165,178,181,190,194,201,207,210,214,226,249,254,264],"molecular":[18,39,73,129,148,191],"weights":[19,40,130,192],"of":[20,23,30,131,134,153,183,193,196,212,228,231],"bands":[22,35,117,133,144,159,195,234,255],"unknown":[25,135,197],"size,":[26],"detecting":[27],"types":[29],"bands,":[32],"grouping":[33],"according":[36,145],"to":[37,102,114,126,142,146,163,294],"their":[38,147,269],"and":[41,53,69,75,86,156,162,199,222,233,237,248,258,275,287],"labeled":[42,259],"each":[43,119,152],"band":[44],"with":[45,209,225,261,280],"its":[46],"group":[47,270],"number":[48],"in":[49,72,118,245,263],"image":[52,108,187,216,266],"generating":[54,200],"corresponding":[56],"phylogenetic":[57,166],"tree":[58],"using":[59,92,217],"data":[61],"extracted":[62],"from":[63,80,106,180],"analyzed":[65],"image.":[67],"Students":[68],"Researchers":[70],"working":[71],"biology":[74],"genetics":[76],"would":[77],"benefit":[78],"greatly":[79],"EGBioImage.":[81],"designed":[85],"developed":[87],"under":[88],"windows":[89],"operating":[90],"system":[91],"C-sharp":[94],"programming":[95],"language.":[96],"It":[97,122,137,150],"uses":[98,110,123,138,151],"Emgu":[99],"CV":[100],"platform":[101],"extract":[103],"contours":[104],"objects":[105],"an":[107],"green":[112],"theorem":[113],"detect":[115],"detected":[120],"lane.":[121],"polynomial":[124],"regression":[125],"calculate":[127],"size.":[136],"K-means":[139],"clustering":[140],"algorithm":[141,155,274],"cluster":[143],"weights.":[149],"upgma":[154],"matching":[158],"amongst":[160],"lanes":[161,232],"construct":[164],"tree.":[167],"provides":[169,206],"very":[171],"friendly":[172],"Graphical":[173],"User":[174],"Interface":[175],"guides":[177],"user":[179,208],"step":[182],"uploading":[184],"toward":[188],"getting":[189],"size":[198],"Phylogenetic":[202],"Tree.":[203],"Moreover,":[204],"ability":[211,227],"processing":[213,221,224],"completely":[219],"manual":[220,229],"automatic":[223],"correction":[230],"\u201cSemi-automatic":[235],"process\u201d":[236],"it":[238],"more":[240],"accurate":[241],"than":[242],"comparable":[243],"some":[246],"respects":[247],"only":[250],"divides":[253],"into":[256],"groups":[257],"them":[260],"numbers":[262],"based":[267],"on":[268],"by":[271],"implementing":[272],"k-means":[273],"these":[276],"claims":[277],"are":[278],"supported":[279],"experiments.":[281],"suitable":[284],"students":[286],"researchers":[288],"who":[289],"do":[290],"not":[291],"have":[292],"access":[293],"commercial":[295],"software.":[296]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":2},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":1}],"updated_date":"2026-05-06T08:25:59.206177","created_date":"2025-10-10T00:00:00"}
