{"id":"https://openalex.org/W3004015834","doi":"https://doi.org/10.1109/access.2019.2958055","title":"IMDAILM: Inferring miRNA-Disease Association by Integrating lncRNA and miRNA Data","display_name":"IMDAILM: Inferring miRNA-Disease Association by Integrating lncRNA and miRNA Data","publication_year":2020,"publication_date":"2020-01-01","ids":{"openalex":"https://openalex.org/W3004015834","doi":"https://doi.org/10.1109/access.2019.2958055","mag":"3004015834"},"language":"en","primary_location":{"id":"doi:10.1109/access.2019.2958055","is_oa":true,"landing_page_url":"https://doi.org/10.1109/access.2019.2958055","pdf_url":"https://ieeexplore.ieee.org/ielx7/6287639/8948470/08926470.pdf","source":{"id":"https://openalex.org/S2485537415","display_name":"IEEE Access","issn_l":"2169-3536","issn":["2169-3536"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Access","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://ieeexplore.ieee.org/ielx7/6287639/8948470/08926470.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100389458","display_name":"Yuhua Yao","orcid":"https://orcid.org/0000-0003-4811-646X"},"institutions":[{"id":"https://openalex.org/I152033890","display_name":"Hainan Normal University","ror":"https://ror.org/031dhcv14","country_code":"CN","type":"education","lineage":["https://openalex.org/I152033890"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yuhua Yao","raw_affiliation_strings":["School of Mathematics and Statistics, Hainan Normal University, Haikou, China"],"raw_orcid":"https://orcid.org/0000-0003-4811-646X","affiliations":[{"raw_affiliation_string":"School of Mathematics and Statistics, Hainan Normal University, Haikou, China","institution_ids":["https://openalex.org/I152033890"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5065455879","display_name":"Binbin Ji","orcid":"https://orcid.org/0000-0002-6719-9574"},"institutions":[{"id":"https://openalex.org/I152033890","display_name":"Hainan Normal University","ror":"https://ror.org/031dhcv14","country_code":"CN","type":"education","lineage":["https://openalex.org/I152033890"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Binbin Ji","raw_affiliation_strings":["School of Mathematics and Statistics, Hainan Normal University, Haikou, China"],"raw_orcid":"https://orcid.org/0000-0002-6719-9574","affiliations":[{"raw_affiliation_string":"School of Mathematics and Statistics, Hainan Normal University, Haikou, China","institution_ids":["https://openalex.org/I152033890"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5060592747","display_name":"Sihong Shi","orcid":"https://orcid.org/0000-0002-1335-3732"},"institutions":[{"id":"https://openalex.org/I152033890","display_name":"Hainan Normal University","ror":"https://ror.org/031dhcv14","country_code":"CN","type":"education","lineage":["https://openalex.org/I152033890"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Sihong Shi","raw_affiliation_strings":["School of Mathematics and Statistics, Hainan Normal University, Haikou, China"],"raw_orcid":"https://orcid.org/0000-0002-1335-3732","affiliations":[{"raw_affiliation_string":"School of Mathematics and Statistics, Hainan Normal University, Haikou, China","institution_ids":["https://openalex.org/I152033890"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5066469263","display_name":"Junlin Xu","orcid":"https://orcid.org/0000-0003-1057-1504"},"institutions":[{"id":"https://openalex.org/I16609230","display_name":"Hunan University","ror":"https://ror.org/05htk5m33","country_code":"CN","type":"education","lineage":["https://openalex.org/I16609230"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Junlin Xu","raw_affiliation_strings":["College of Computer Science and Electronic Engineering, Hunan University, Changsha, China"],"raw_orcid":"https://orcid.org/0000-0003-1057-1504","affiliations":[{"raw_affiliation_string":"College of Computer Science and Electronic Engineering, Hunan University, Changsha, China","institution_ids":["https://openalex.org/I16609230"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5006324485","display_name":"Xiaofang Xiao","orcid":"https://orcid.org/0000-0003-3676-1744"},"institutions":[{"id":"https://openalex.org/I16609230","display_name":"Hunan University","ror":"https://ror.org/05htk5m33","country_code":"CN","type":"education","lineage":["https://openalex.org/I16609230"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xiaofang Xiao","raw_affiliation_strings":["College of Computer Science and Electronic Engineering, Hunan University, Changsha, China"],"raw_orcid":"https://orcid.org/0000-0003-3676-1744","affiliations":[{"raw_affiliation_string":"College of Computer Science and Electronic Engineering, Hunan University, Changsha, China","institution_ids":["https://openalex.org/I16609230"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5026249217","display_name":"Enchao Yu","orcid":"https://orcid.org/0000-0002-9832-7516"},"institutions":[{"id":"https://openalex.org/I4210139220","display_name":"Cipher Gene (China)","ror":"https://ror.org/03fqvdm62","country_code":"CN","type":"company","lineage":["https://openalex.org/I4210139220"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Enchao Yu","raw_affiliation_strings":["Geneis Beijing Company, Ltd., Beijing, China"],"raw_orcid":"https://orcid.org/0000-0002-9832-7516","affiliations":[{"raw_affiliation_string":"Geneis Beijing Company, Ltd., Beijing, China","institution_ids":["https://openalex.org/I4210139220"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5112304664","display_name":"Bo Liao","orcid":null},"institutions":[{"id":"https://openalex.org/I152033890","display_name":"Hainan Normal University","ror":"https://ror.org/031dhcv14","country_code":"CN","type":"education","lineage":["https://openalex.org/I152033890"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Bo Liao","raw_affiliation_strings":["School of Mathematics and Statistics, Hainan Normal University, Haikou, China"],"raw_orcid":"https://orcid.org/0000-0001-7391-4063","affiliations":[{"raw_affiliation_string":"School of Mathematics and Statistics, Hainan Normal University, Haikou, China","institution_ids":["https://openalex.org/I152033890"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5028692805","display_name":"Jialiang Yang","orcid":"https://orcid.org/0000-0003-4689-8672"},"institutions":[{"id":"https://openalex.org/I152033890","display_name":"Hainan Normal University","ror":"https://ror.org/031dhcv14","country_code":"CN","type":"education","lineage":["https://openalex.org/I152033890"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jialiang Yang","raw_affiliation_strings":["School of Mathematics and Statistics, Hainan Normal University, Haikou, China"],"raw_orcid":"https://orcid.org/0000-0003-4689-8672","affiliations":[{"raw_affiliation_string":"School of Mathematics and Statistics, Hainan Normal University, Haikou, China","institution_ids":["https://openalex.org/I152033890"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":8,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":1850,"currency":"USD","value_usd":1850},"apc_paid":{"value":1850,"currency":"USD","value_usd":1850},"fwci":0.803,"has_fulltext":true,"cited_by_count":12,"citation_normalized_percentile":{"value":0.66001598,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":97},"biblio":{"volume":"8","issue":null,"first_page":"16517","last_page":"16527"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10515","display_name":"Cancer-related molecular mechanisms research","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10515","display_name":"Cancer-related molecular mechanisms research","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10062","display_name":"MicroRNA in disease regulation","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11765","display_name":"Circular RNAs in diseases","score":0.9988999962806702,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/microrna","display_name":"microRNA","score":0.7259118556976318},{"id":"https://openalex.org/keywords/disease","display_name":"Disease","score":0.6386189460754395},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5859375596046448},{"id":"https://openalex.org/keywords/inference","display_name":"Inference","score":0.5443704724311829},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.4515303373336792},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.4199903607368469},{"id":"https://openalex.org/keywords/gene-regulatory-network","display_name":"Gene regulatory network","score":0.41402262449264526},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.3614252805709839},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.2455960214138031},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.2312232255935669},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.2201472520828247},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.21555721759796143},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.09975457191467285},{"id":"https://openalex.org/keywords/pathology","display_name":"Pathology","score":0.07900601625442505}],"concepts":[{"id":"https://openalex.org/C145059251","wikidata":"https://www.wikidata.org/wiki/Q310899","display_name":"microRNA","level":3,"score":0.7259118556976318},{"id":"https://openalex.org/C2779134260","wikidata":"https://www.wikidata.org/wiki/Q12136","display_name":"Disease","level":2,"score":0.6386189460754395},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5859375596046448},{"id":"https://openalex.org/C2776214188","wikidata":"https://www.wikidata.org/wiki/Q408386","display_name":"Inference","level":2,"score":0.5443704724311829},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.4515303373336792},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.4199903607368469},{"id":"https://openalex.org/C67339327","wikidata":"https://www.wikidata.org/wiki/Q1502576","display_name":"Gene regulatory network","level":4,"score":0.41402262449264526},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3614252805709839},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.2455960214138031},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.2312232255935669},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.2201472520828247},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.21555721759796143},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.09975457191467285},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.07900601625442505}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1109/access.2019.2958055","is_oa":true,"landing_page_url":"https://doi.org/10.1109/access.2019.2958055","pdf_url":"https://ieeexplore.ieee.org/ielx7/6287639/8948470/08926470.pdf","source":{"id":"https://openalex.org/S2485537415","display_name":"IEEE Access","issn_l":"2169-3536","issn":["2169-3536"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Access","raw_type":"journal-article"},{"id":"pmh:oai:doaj.org/article:d45ad8b25b2c487e84a6588fa999a1f3","is_oa":true,"landing_page_url":"https://doaj.org/article/d45ad8b25b2c487e84a6588fa999a1f3","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"IEEE Access, Vol 8, Pp 16517-16527 (2020)","raw_type":"article"}],"best_oa_location":{"id":"doi:10.1109/access.2019.2958055","is_oa":true,"landing_page_url":"https://doi.org/10.1109/access.2019.2958055","pdf_url":"https://ieeexplore.ieee.org/ielx7/6287639/8948470/08926470.pdf","source":{"id":"https://openalex.org/S2485537415","display_name":"IEEE Access","issn_l":"2169-3536","issn":["2169-3536"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Access","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G5209577931","display_name":null,"funder_award_id":"61762035","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G6422490457","display_name":null,"funder_award_id":"119MS037","funder_id":"https://openalex.org/F4320322866","funder_display_name":"Natural Science Foundation of Hainan Province"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320322866","display_name":"Natural Science Foundation of Hainan Province","ror":"https://ror.org/01h0zpd94"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3004015834.pdf","grobid_xml":"https://content.openalex.org/works/W3004015834.grobid-xml"},"referenced_works_count":54,"referenced_works":["https://openalex.org/W144423133","https://openalex.org/W1103894127","https://openalex.org/W1556303345","https://openalex.org/W1595368585","https://openalex.org/W1702507500","https://openalex.org/W1964731342","https://openalex.org/W1967087625","https://openalex.org/W1970121668","https://openalex.org/W1974493786","https://openalex.org/W1982575342","https://openalex.org/W1992272392","https://openalex.org/W2008365039","https://openalex.org/W2009626621","https://openalex.org/W2010040849","https://openalex.org/W2010215928","https://openalex.org/W2013411684","https://openalex.org/W2015863218","https://openalex.org/W2027514285","https://openalex.org/W2035213975","https://openalex.org/W2039606711","https://openalex.org/W2044127274","https://openalex.org/W2051055358","https://openalex.org/W2055027431","https://openalex.org/W2070777085","https://openalex.org/W2086809547","https://openalex.org/W2089990689","https://openalex.org/W2099169447","https://openalex.org/W2100756525","https://openalex.org/W2119687825","https://openalex.org/W2128983843","https://openalex.org/W2132694427","https://openalex.org/W2141222510","https://openalex.org/W2145361279","https://openalex.org/W2146292498","https://openalex.org/W2150291212","https://openalex.org/W2155431361","https://openalex.org/W2158135353","https://openalex.org/W2159727850","https://openalex.org/W2165948908","https://openalex.org/W2170730747","https://openalex.org/W2174891444","https://openalex.org/W2207064026","https://openalex.org/W2274610632","https://openalex.org/W2313125707","https://openalex.org/W2416873003","https://openalex.org/W2537429907","https://openalex.org/W2539508946","https://openalex.org/W2592189645","https://openalex.org/W2750900465","https://openalex.org/W2795540478","https://openalex.org/W2799307902","https://openalex.org/W2962928958","https://openalex.org/W2970280796","https://openalex.org/W6716286477"],"related_works":["https://openalex.org/W2737319532","https://openalex.org/W4392896533","https://openalex.org/W2062945643","https://openalex.org/W2050308539","https://openalex.org/W2950199998","https://openalex.org/W2560421304","https://openalex.org/W2951387065","https://openalex.org/W4385727351","https://openalex.org/W4306798985","https://openalex.org/W2057742104"],"abstract_inverted_index":{"In":[0,176,207,251,291],"recent":[1,233],"years,":[2],"more":[3,5],"and":[4,44,48,69,92,126,140,152,174,195,205,246],"studies":[6],"have":[7,76,117],"shown":[8],"that":[9,53,104,258],"microRNAs":[10],"(miRNAs)":[11],"play":[12],"a":[13,27,72,129,161,178,198,231,276,299],"key":[14],"role":[15],"in":[16,266],"many":[17],"important":[18,39],"biological":[19],"processes.":[20],"Dysregulation":[21],"of":[22,29,166,169,217,240,295,307],"miRNAs":[23,221,247,268,280],"can":[24],"lead":[25],"to":[26,56,79,88,100,143,159,185,263,304],"variety":[28],"diseases":[30,224,284],"like":[31,285],"cancers,":[32],"thus":[33],"predicting":[34,220,243,267],"potential":[35],"miRNA-disease":[36,58,82,145,149,188,308],"associations":[37,59,83],"is":[38,51,67,109,203,260],"for":[40,112,219,242],"understanding":[41],"drug":[42],"development":[43],"disease":[45,141],"pathogenesis,":[46],"diagnosis":[47],"treatment.":[49],"It":[50],"known":[52],"experimental":[54],"methods":[55,265],"validate":[57],"typically":[60],"involve":[61],"miRNA":[62,127],"knockout":[63],"or":[64],"knockdown,":[65],"which":[66],"time":[68],"labor-intensive.":[70],"As":[71],"result,":[73],"computational":[74],"models":[75],"been":[77],"developed":[78,118],"predict":[80,144],"unknown":[81],"from":[84],"available":[85],"information":[86,142,297],"related":[87],"miRNAs,":[89,172],"diseases,":[90],"genes,":[91],"so":[93],"on.":[94],"However,":[95],"their":[96],"performances":[97],"are":[98,157],"yet":[99],"be":[101],"improved.":[102],"Noticing":[103],"appropriately":[105],"combining":[106],"multiple":[107],"data-source":[108],"usually":[110],"helpful":[111],"improving":[113],"prediction":[114,306],"accuracy,":[115],"we":[116,274],"IMDAILM:":[119],"Inferring":[120],"miRNA-Disease":[121],"Association":[122],"by":[123,288],"integrating":[124,134],"lncRNA":[125,296],"data,":[128],"low-rank":[130,199],"matrix":[131,200,300],"completion":[132,201,301],"model":[133,202],"miRNA,":[135],"long":[136],"noncoding":[137],"RNA":[138],"(lncRNA)":[139],"associations.":[146,309],"Specifically,":[147],"the":[148,153,214,226,253,293,305],"association":[150,155],"network":[151,156,164,194],"lncRNA-disease":[154],"fused":[158],"form":[160],"new":[162],"heterogeneous":[163,193],"consisting":[165],"3":[167],"types":[168],"nodes":[170],"representing":[171],"lncRNAs":[173,245],"diseases.":[175,250,272],"addition,":[177,252],"negative":[179,196],"sample":[180],"inference":[181],"method":[182],"was":[183],"proposed":[184,204],"infer":[186],"unrelated":[187],"pairs.":[189],"Based":[190],"on":[191],"both":[192,244],"samples,":[197],"solved.":[206],"practice,":[208],"IMDAILM":[209,235,259],"achieved":[210],"an":[211,238],"area":[212],"under":[213,225],"curve":[215],"(AUC)":[216],"0.8884":[218],"associated":[222,248,269,281],"with":[223,249,270,282],"5-fold":[227,254],"cross-validation":[228],"(CV),":[229],"outperforming":[230],"few":[232,277],"methods.":[234],"also":[236,261],"yielded":[237],"AUC":[239],"0.8870":[241],"CV":[255],"results":[256],"indicate":[257],"superior":[262],"other":[264],"isolated":[271],"Finally,":[273],"confirmed":[275],"novel":[278],"predicted":[279],"specific":[283],"lung":[286],"cancers":[287],"literature":[289],"mining.":[290],"summary,":[292],"integration":[294],"into":[298],"framework":[302],"contributes":[303]},"counts_by_year":[{"year":2024,"cited_by_count":2},{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":3},{"year":2021,"cited_by_count":4},{"year":2020,"cited_by_count":2}],"updated_date":"2026-06-11T09:08:48.828518","created_date":"2025-10-10T00:00:00"}
