{"id":"https://openalex.org/W2940891808","doi":"https://doi.org/10.1109/access.2019.2912945","title":"IIRWR: Internal Inclined Random Walk With Restart for LncRNA-Disease Association Prediction","display_name":"IIRWR: Internal Inclined Random Walk With Restart for LncRNA-Disease Association Prediction","publication_year":2019,"publication_date":"2019-01-01","ids":{"openalex":"https://openalex.org/W2940891808","doi":"https://doi.org/10.1109/access.2019.2912945","mag":"2940891808"},"language":"en","primary_location":{"id":"doi:10.1109/access.2019.2912945","is_oa":true,"landing_page_url":"https://doi.org/10.1109/access.2019.2912945","pdf_url":"https://ieeexplore.ieee.org/ielx7/6287639/8600701/08698839.pdf","source":{"id":"https://openalex.org/S2485537415","display_name":"IEEE Access","issn_l":"2169-3536","issn":["2169-3536"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Access","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://ieeexplore.ieee.org/ielx7/6287639/8600701/08698839.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100710637","display_name":"Lei Wang","orcid":"https://orcid.org/0000-0002-5065-8447"},"institutions":[{"id":"https://openalex.org/I4610292","display_name":"Xiangtan University","ror":"https://ror.org/00xsfaz62","country_code":"CN","type":"education","lineage":["https://openalex.org/I4610292"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Lei Wang","raw_affiliation_strings":["Key Laboratory of Hunan Province for Internet of Things and Information Security, Xiangtan University, Xiangtan, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Key Laboratory of Hunan Province for Internet of Things and Information Security, Xiangtan University, Xiangtan, China","institution_ids":["https://openalex.org/I4610292"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5091352254","display_name":"Yubin Xiao","orcid":null},"institutions":[{"id":"https://openalex.org/I4610292","display_name":"Xiangtan University","ror":"https://ror.org/00xsfaz62","country_code":"CN","type":"education","lineage":["https://openalex.org/I4610292"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yubin Xiao","raw_affiliation_strings":["Key Laboratory of Hunan Province for Internet of Things and Information Security, Xiangtan University, Xiangtan, China"],"raw_orcid":"https://orcid.org/0000-0002-2311-8058","affiliations":[{"raw_affiliation_string":"Key Laboratory of Hunan Province for Internet of Things and Information Security, Xiangtan University, Xiangtan, China","institution_ids":["https://openalex.org/I4610292"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5014312058","display_name":"Jiechen Li","orcid":"https://orcid.org/0000-0002-9154-7161"},"institutions":[{"id":"https://openalex.org/I4610292","display_name":"Xiangtan University","ror":"https://ror.org/00xsfaz62","country_code":"CN","type":"education","lineage":["https://openalex.org/I4610292"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jiechen Li","raw_affiliation_strings":["Key Laboratory of Hunan Province for Internet of Things and Information Security, Xiangtan University, Xiangtan, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Key Laboratory of Hunan Province for Internet of Things and Information Security, Xiangtan University, Xiangtan, China","institution_ids":["https://openalex.org/I4610292"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100723509","display_name":"Xiang Feng","orcid":"https://orcid.org/0000-0003-4602-5230"},"institutions":[{"id":"https://openalex.org/I198357462","display_name":"Changsha University","ror":"https://ror.org/011d8sm39","country_code":"CN","type":"education","lineage":["https://openalex.org/I198357462"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xiang Feng","raw_affiliation_strings":["College of Computer Engineering and Applied Mathematics, Changsha University, Changsha, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Computer Engineering and Applied Mathematics, Changsha University, Changsha, China","institution_ids":["https://openalex.org/I198357462"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100340580","display_name":"Qian Li","orcid":"https://orcid.org/0000-0002-2763-5618"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Qian Li","raw_affiliation_strings":["Genesis Beijing Co., Ltd., Beijing, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Genesis Beijing Co., Ltd., Beijing, China","institution_ids":[]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5028692805","display_name":"Jialiang Yang","orcid":"https://orcid.org/0000-0003-4689-8672"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Jialiang Yang","raw_affiliation_strings":["Genesis Beijing Co., Ltd., Beijing, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Genesis Beijing Co., Ltd., Beijing, China","institution_ids":[]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":1850,"currency":"USD","value_usd":1850},"apc_paid":{"value":1850,"currency":"USD","value_usd":1850},"fwci":3.5055,"has_fulltext":true,"cited_by_count":48,"citation_normalized_percentile":{"value":0.94129742,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":100},"biblio":{"volume":"7","issue":null,"first_page":"54034","last_page":"54041"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10515","display_name":"Cancer-related molecular mechanisms research","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10515","display_name":"Cancer-related molecular mechanisms research","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/novelty","display_name":"Novelty","score":0.7500298023223877},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6702378392219543},{"id":"https://openalex.org/keywords/random-walk","display_name":"Random walk","score":0.6288201808929443},{"id":"https://openalex.org/keywords/cross-validation","display_name":"Cross-validation","score":0.4694710969924927},{"id":"https://openalex.org/keywords/association","display_name":"Association (psychology)","score":0.4679113030433655},{"id":"https://openalex.org/keywords/predictive-modelling","display_name":"Predictive modelling","score":0.4362563490867615},{"id":"https://openalex.org/keywords/inference","display_name":"Inference","score":0.4298049211502075},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.4173002541065216},{"id":"https://openalex.org/keywords/coding","display_name":"Coding (social sciences)","score":0.414081871509552},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.40872427821159363},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.3398691415786743},{"id":"https://openalex.org/keywords/statistics","display_name":"Statistics","score":0.21795150637626648},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.20410257577896118}],"concepts":[{"id":"https://openalex.org/C2778738651","wikidata":"https://www.wikidata.org/wiki/Q16546687","display_name":"Novelty","level":2,"score":0.7500298023223877},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6702378392219543},{"id":"https://openalex.org/C121194460","wikidata":"https://www.wikidata.org/wiki/Q856741","display_name":"Random walk","level":2,"score":0.6288201808929443},{"id":"https://openalex.org/C27181475","wikidata":"https://www.wikidata.org/wiki/Q541014","display_name":"Cross-validation","level":2,"score":0.4694710969924927},{"id":"https://openalex.org/C142853389","wikidata":"https://www.wikidata.org/wiki/Q744778","display_name":"Association (psychology)","level":2,"score":0.4679113030433655},{"id":"https://openalex.org/C45804977","wikidata":"https://www.wikidata.org/wiki/Q7239673","display_name":"Predictive modelling","level":2,"score":0.4362563490867615},{"id":"https://openalex.org/C2776214188","wikidata":"https://www.wikidata.org/wiki/Q408386","display_name":"Inference","level":2,"score":0.4298049211502075},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.4173002541065216},{"id":"https://openalex.org/C179518139","wikidata":"https://www.wikidata.org/wiki/Q5140297","display_name":"Coding (social sciences)","level":2,"score":0.414081871509552},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.40872427821159363},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.3398691415786743},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.21795150637626648},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.20410257577896118},{"id":"https://openalex.org/C27206212","wikidata":"https://www.wikidata.org/wiki/Q34178","display_name":"Theology","level":1,"score":0.0},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1109/access.2019.2912945","is_oa":true,"landing_page_url":"https://doi.org/10.1109/access.2019.2912945","pdf_url":"https://ieeexplore.ieee.org/ielx7/6287639/8600701/08698839.pdf","source":{"id":"https://openalex.org/S2485537415","display_name":"IEEE Access","issn_l":"2169-3536","issn":["2169-3536"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Access","raw_type":"journal-article"},{"id":"pmh:oai:doaj.org/article:84b577c0ceea4f8ea41f16f9724c98bd","is_oa":true,"landing_page_url":"https://doaj.org/article/84b577c0ceea4f8ea41f16f9724c98bd","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"IEEE Access, Vol 7, Pp 54034-54041 (2019)","raw_type":"article"}],"best_oa_location":{"id":"doi:10.1109/access.2019.2912945","is_oa":true,"landing_page_url":"https://doi.org/10.1109/access.2019.2912945","pdf_url":"https://ieeexplore.ieee.org/ielx7/6287639/8600701/08698839.pdf","source":{"id":"https://openalex.org/S2485537415","display_name":"IEEE Access","issn_l":"2169-3536","issn":["2169-3536"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Access","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/3","score":0.49000000953674316,"display_name":"Good health and well-being"}],"awards":[{"id":"https://openalex.org/G1653967049","display_name":null,"funder_award_id":"2017JJ5036","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G2346887922","display_name":null,"funder_award_id":"2019JJ70010","funder_id":"https://openalex.org/F4320322843","funder_display_name":"Natural Science Foundation of\u00a0Hunan Province"},{"id":"https://openalex.org/G3076711459","display_name":null,"funder_award_id":"NGII20170109","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G3107359239","display_name":null,"funder_award_id":"61873221","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G4652393474","display_name":"\u79fb\u52a8\u7269\u8054\u7f51\u4e2d\u57fa\u4e8e\u5bf9\u79f0\u5bc6\u94a5\u673a\u5236\u7684\u53ef\u9a8c\u8bc1\u9690\u79c1\u4fdd\u62a4\u6280\u672f\u7814\u7a76","funder_award_id":"61672447","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G601930595","display_name":null,"funder_award_id":"NGII20160305","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G636293411","display_name":null,"funder_award_id":"2018JJ4058","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G7105814720","display_name":null,"funder_award_id":"2018JJ4058","funder_id":"https://openalex.org/F4320322843","funder_display_name":"Natural Science Foundation of\u00a0Hunan Province"},{"id":"https://openalex.org/G734131597","display_name":null,"funder_award_id":"No. 61873221, No. 61672447","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G8097458190","display_name":null,"funder_award_id":"2017JJ5036","funder_id":"https://openalex.org/F4320322843","funder_display_name":"Natural Science Foundation of\u00a0Hunan Province"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320322843","display_name":"Natural Science Foundation of\u00a0Hunan Province","ror":null}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2940891808.pdf","grobid_xml":"https://content.openalex.org/works/W2940891808.grobid-xml"},"referenced_works_count":39,"referenced_works":["https://openalex.org/W176140544","https://openalex.org/W1158178075","https://openalex.org/W1531032661","https://openalex.org/W1983335031","https://openalex.org/W1999008082","https://openalex.org/W1999746344","https://openalex.org/W2000833392","https://openalex.org/W2002185065","https://openalex.org/W2008491586","https://openalex.org/W2029872802","https://openalex.org/W2039816251","https://openalex.org/W2049621625","https://openalex.org/W2060289544","https://openalex.org/W2062313490","https://openalex.org/W2065615506","https://openalex.org/W2067410483","https://openalex.org/W2073136316","https://openalex.org/W2091161969","https://openalex.org/W2106029302","https://openalex.org/W2107959716","https://openalex.org/W2108051165","https://openalex.org/W2109100311","https://openalex.org/W2126880994","https://openalex.org/W2128983843","https://openalex.org/W2130313087","https://openalex.org/W2141222510","https://openalex.org/W2144137532","https://openalex.org/W2152970345","https://openalex.org/W2168909179","https://openalex.org/W2401917277","https://openalex.org/W2402883299","https://openalex.org/W2408796111","https://openalex.org/W2439888078","https://openalex.org/W2462108616","https://openalex.org/W2739280501","https://openalex.org/W2801501532","https://openalex.org/W2880850155","https://openalex.org/W2912626494","https://openalex.org/W6607237622"],"related_works":["https://openalex.org/W2381242807","https://openalex.org/W3126131230","https://openalex.org/W2040236930","https://openalex.org/W2944249082","https://openalex.org/W2935025214","https://openalex.org/W2095987352","https://openalex.org/W4401407419","https://openalex.org/W2596476457","https://openalex.org/W4387664169","https://openalex.org/W2776255613"],"abstract_inverted_index":{"Experimental":[0],"studies":[1,199],"have":[2],"demonstrated":[3],"that":[4,169,209,228],"long-non-coding":[5],"RNAs":[6],"(lncRNAs)":[7],"are":[8,31],"closely":[9],"related":[10,224],"to":[11,16,38,43,83,90,121,143],"human":[12],"disease.":[13],"However,":[14],"due":[15],"the":[17,45,91,105,108,115,118,135,138,144,157,182,205,215],"complexity":[18],"of":[19,24,99,107,110,117,130,137,140,159,176,184,200,214],"diseases":[20,28,49,236],"and":[21,29,50,88,179,190,203,211],"high":[22],"costs":[23],"bio-experiments,":[25],"associations":[26,87,162],"between":[27,48],"lncRNAs":[30,219],"still":[32],"unclear.":[33],"Hence,":[34],"it":[35],"is":[36,104,163,231],"essential":[37],"establish":[39],"effective":[40,232],"computational":[41],"models":[42,59],"predict":[44],"potential":[46,85],"relationships":[47],"lncRNAs.":[51,238],"In":[52],"this":[53],"paper,":[54],"different":[55],"from":[56],"traditional":[57],"prediction":[58,69,94,102,154],"based":[60,71],"on":[61,72],"random":[62,75,119],"walk":[63,76,120],"with":[64,77],"restart":[65,78],"(RWR),":[66],"a":[67],"novel":[68,235],"model":[70,103,132,150,171],"internal":[73,124],"inclined":[74],"(IIRWR)":[79],"has":[80],"been":[81],"established":[82],"infer":[84],"lncRNA-disease":[86,161],"compared":[89],"state-of-the-art":[92],"RWR-based":[93],"models.":[95],"One":[96],"major":[97,128],"novelty":[98,129],"our":[100,131,149,170,229],"IIRWR-based":[101],"introduction":[106],"concept":[109],"disease":[111,141],"clique,":[112],"which":[113,147,226],"makes":[114],"process":[116],"possess":[122],"an":[123],"tendency.":[125],"The":[126,165],"other":[127],"lies":[133],"in":[134,197,233],"addition":[136],"weights":[139],"linkages":[142],"traveling":[145],"network,":[146],"guarantees":[148],"can":[151,172,220],"achieve":[152,173],"excellent":[153],"performance":[155],"while":[156],"number":[158],"known":[160],"limited.":[164],"simulation":[166],"results":[167,207],"show":[168,208],"reliable":[174],"AUCs":[175],"0.8080,":[177],"0.8363,":[178],"0.8745":[180],"under":[181],"frameworks":[183],"five-fold":[185],"cross-validation":[186],"(CV),":[187],"ten-fold":[188],"CV,":[189],"leave-one-out":[191],"cross":[192],"validation":[193],"(LOOCV),":[194],"respectively.":[195],"Moreover,":[196],"case":[198],"cervical":[201],"cancer":[202],"leukemia,":[204],"experimental":[206],"eight":[210],"ten":[212,217],"out":[213],"top":[216],"predicted":[218],"be":[221],"confirmed":[222],"by":[223],"literature,":[225],"demonstrates":[227],"method":[230],"predicting":[234],"associated":[237]},"counts_by_year":[{"year":2025,"cited_by_count":5},{"year":2024,"cited_by_count":2},{"year":2023,"cited_by_count":7},{"year":2022,"cited_by_count":7},{"year":2021,"cited_by_count":8},{"year":2020,"cited_by_count":18},{"year":2019,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
