{"id":"https://openalex.org/W1979642041","doi":"https://doi.org/10.1109/acc.2007.4282913","title":"LMI-based Algorithm for the Reconstruction of Biological Networks","display_name":"LMI-based Algorithm for the Reconstruction of Biological Networks","publication_year":2007,"publication_date":"2007-07-01","ids":{"openalex":"https://openalex.org/W1979642041","doi":"https://doi.org/10.1109/acc.2007.4282913","mag":"1979642041"},"language":"en","primary_location":{"id":"doi:10.1109/acc.2007.4282913","is_oa":false,"landing_page_url":"https://doi.org/10.1109/acc.2007.4282913","pdf_url":null,"source":{"id":"https://openalex.org/S4210168941","display_name":"Proceedings of the ... American Control Conference/Proceedings of the American Control Conference","issn_l":"0743-1619","issn":["0743-1619","2378-5861"],"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"conference"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2007 American Control Conference","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5030101234","display_name":"Francesco Amato","orcid":"https://orcid.org/0000-0002-9053-3139"},"institutions":[{"id":"https://openalex.org/I36443711","display_name":"Magna Graecia University","ror":"https://ror.org/0530bdk91","country_code":"IT","type":"education","lineage":["https://openalex.org/I36443711"]}],"countries":["IT"],"is_corresponding":true,"raw_author_name":"F. Amato","raw_affiliation_strings":["School of Computer and Biomedical Engineering, Department of Experimental and Clinical Medicine, Universit\u00e0 degli Studi Magna Gracia di Catanzaro, Catanzaro, Italy","Univ. degli Studi Magna Graecia di Catanzaro, Catanzaro"],"affiliations":[{"raw_affiliation_string":"School of Computer and Biomedical Engineering, Department of Experimental and Clinical Medicine, Universit\u00e0 degli Studi Magna Gracia di Catanzaro, Catanzaro, Italy","institution_ids":["https://openalex.org/I36443711"]},{"raw_affiliation_string":"Univ. degli Studi Magna Graecia di Catanzaro, Catanzaro","institution_ids":["https://openalex.org/I36443711"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5085080876","display_name":"Carlo Cosentino","orcid":"https://orcid.org/0000-0001-5768-1829"},"institutions":[{"id":"https://openalex.org/I36443711","display_name":"Magna Graecia University","ror":"https://ror.org/0530bdk91","country_code":"IT","type":"education","lineage":["https://openalex.org/I36443711"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"C. Cosentino","raw_affiliation_strings":["School of Computer and Biomedical Engineering, Department of Experimental and Clinical Medicine, Universit\u00e0 degli Studi Magna Gracia di Catanzaro, Catanzaro, Italy","Univ. degli Studi Magna Graecia di Catanzaro, Catanzaro"],"affiliations":[{"raw_affiliation_string":"School of Computer and Biomedical Engineering, Department of Experimental and Clinical Medicine, Universit\u00e0 degli Studi Magna Gracia di Catanzaro, Catanzaro, Italy","institution_ids":["https://openalex.org/I36443711"]},{"raw_affiliation_string":"Univ. degli Studi Magna Graecia di Catanzaro, Catanzaro","institution_ids":["https://openalex.org/I36443711"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5046248479","display_name":"W. Curatola","orcid":null},"institutions":[{"id":"https://openalex.org/I36443711","display_name":"Magna Graecia University","ror":"https://ror.org/0530bdk91","country_code":"IT","type":"education","lineage":["https://openalex.org/I36443711"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"W. Curatola","raw_affiliation_strings":["School of Computer and Biomedical Engineering, Department of Experimental and Clinical Medicine, Universit\u00e0 degli Studi Magna Gracia di Catanzaro, Catanzaro, Italy","Univ. degli Studi Magna Graecia di Catanzaro, Catanzaro"],"affiliations":[{"raw_affiliation_string":"School of Computer and Biomedical Engineering, Department of Experimental and Clinical Medicine, Universit\u00e0 degli Studi Magna Gracia di Catanzaro, Catanzaro, Italy","institution_ids":["https://openalex.org/I36443711"]},{"raw_affiliation_string":"Univ. degli Studi Magna Graecia di Catanzaro, Catanzaro","institution_ids":["https://openalex.org/I36443711"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5001896455","display_name":"Diego di Bernardo","orcid":"https://orcid.org/0000-0002-1911-7407"},"institutions":[{"id":"https://openalex.org/I4210152213","display_name":"Telethon Institute Of Genetics And Medicine","ror":"https://ror.org/04xfdsg27","country_code":"IT","type":"facility","lineage":["https://openalex.org/I4210152213"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"D. di Bernardo","raw_affiliation_strings":["Systems Biology Group, Telethon Institute for Genetics and Medicine, Naples, Italy","Systems Biology Group, Telethon Institute for Genetics and Medicine (TIGEM), 80131 Naples, Italy. dibernardo@tigem.it"],"affiliations":[{"raw_affiliation_string":"Systems Biology Group, Telethon Institute for Genetics and Medicine, Naples, Italy","institution_ids":["https://openalex.org/I4210152213"]},{"raw_affiliation_string":"Systems Biology Group, Telethon Institute for Genetics and Medicine (TIGEM), 80131 Naples, Italy. dibernardo@tigem.it","institution_ids":["https://openalex.org/I4210152213"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5030101234"],"corresponding_institution_ids":["https://openalex.org/I36443711"],"apc_list":null,"apc_paid":null,"fwci":1.9334,"has_fulltext":false,"cited_by_count":5,"citation_normalized_percentile":{"value":0.80235294,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":93},"biblio":{"volume":null,"issue":null,"first_page":"2720","last_page":"2725"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9975000023841858,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":0.9923999905586243,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/a-priori-and-a-posteriori","display_name":"A priori and a posteriori","score":0.6937220096588135},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6317877769470215},{"id":"https://openalex.org/keywords/biological-network","display_name":"Biological network","score":0.60398930311203},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.550419270992279},{"id":"https://openalex.org/keywords/biological-data","display_name":"Biological data","score":0.5451161861419678},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.48326021432876587},{"id":"https://openalex.org/keywords/system-identification","display_name":"System identification","score":0.45603808760643005},{"id":"https://openalex.org/keywords/linear-dynamical-system","display_name":"Linear dynamical system","score":0.45411232113838196},{"id":"https://openalex.org/keywords/mathematical-optimization","display_name":"Mathematical optimization","score":0.4073953330516815},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.2765392065048218},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.27294430136680603},{"id":"https://openalex.org/keywords/linear-system","display_name":"Linear system","score":0.26535218954086304},{"id":"https://openalex.org/keywords/measure","display_name":"Measure (data warehouse)","score":0.09828922152519226}],"concepts":[{"id":"https://openalex.org/C75553542","wikidata":"https://www.wikidata.org/wiki/Q178161","display_name":"A priori and a posteriori","level":2,"score":0.6937220096588135},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6317877769470215},{"id":"https://openalex.org/C28225019","wikidata":"https://www.wikidata.org/wiki/Q4915005","display_name":"Biological network","level":2,"score":0.60398930311203},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.550419270992279},{"id":"https://openalex.org/C201797286","wikidata":"https://www.wikidata.org/wiki/Q4914986","display_name":"Biological data","level":2,"score":0.5451161861419678},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.48326021432876587},{"id":"https://openalex.org/C119247159","wikidata":"https://www.wikidata.org/wiki/Q1366192","display_name":"System identification","level":3,"score":0.45603808760643005},{"id":"https://openalex.org/C114275822","wikidata":"https://www.wikidata.org/wiki/Q621512","display_name":"Linear dynamical system","level":3,"score":0.45411232113838196},{"id":"https://openalex.org/C126255220","wikidata":"https://www.wikidata.org/wiki/Q141495","display_name":"Mathematical optimization","level":1,"score":0.4073953330516815},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.2765392065048218},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.27294430136680603},{"id":"https://openalex.org/C6802819","wikidata":"https://www.wikidata.org/wiki/Q1072174","display_name":"Linear system","level":2,"score":0.26535218954086304},{"id":"https://openalex.org/C2780009758","wikidata":"https://www.wikidata.org/wiki/Q6804172","display_name":"Measure (data warehouse)","level":2,"score":0.09828922152519226},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C114614502","wikidata":"https://www.wikidata.org/wiki/Q76592","display_name":"Combinatorics","level":1,"score":0.0},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/acc.2007.4282913","is_oa":false,"landing_page_url":"https://doi.org/10.1109/acc.2007.4282913","pdf_url":null,"source":{"id":"https://openalex.org/S4210168941","display_name":"Proceedings of the ... American Control Conference/Proceedings of the American Control Conference","issn_l":"0743-1619","issn":["0743-1619","2378-5861"],"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"conference"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2007 American Control Conference","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":30,"referenced_works":["https://openalex.org/W1487444668","https://openalex.org/W1488721024","https://openalex.org/W1598648881","https://openalex.org/W1967053372","https://openalex.org/W1993189701","https://openalex.org/W2029441111","https://openalex.org/W2043351548","https://openalex.org/W2047674748","https://openalex.org/W2058221907","https://openalex.org/W2076372398","https://openalex.org/W2082982706","https://openalex.org/W2091879895","https://openalex.org/W2095622082","https://openalex.org/W2124025352","https://openalex.org/W2142659266","https://openalex.org/W2153928190","https://openalex.org/W2154664365","https://openalex.org/W2160533336","https://openalex.org/W2166106382","https://openalex.org/W2170704198","https://openalex.org/W2271358270","https://openalex.org/W2280706665","https://openalex.org/W2611370172","https://openalex.org/W3210839039","https://openalex.org/W4238586295","https://openalex.org/W4301621763","https://openalex.org/W4301963261","https://openalex.org/W6661357148","https://openalex.org/W6671346601","https://openalex.org/W6678483986"],"related_works":["https://openalex.org/W2155492529","https://openalex.org/W4252504573","https://openalex.org/W4385510321","https://openalex.org/W15348386","https://openalex.org/W2314128295","https://openalex.org/W1509942269","https://openalex.org/W4287026692","https://openalex.org/W2077895977","https://openalex.org/W2609388058","https://openalex.org/W2132274001"],"abstract_inverted_index":{"The":[0,90],"general":[1],"problem":[2],"of":[3,29,66,72,82,103],"reconstructing":[4],"a":[5,59,95],"biological":[6,61,88],"network":[7,31],"from":[8],"temporal":[9],"evolution":[10],"data":[11,56],"is":[12,40,76,92,100],"tackled":[13],"via":[14],"an":[15,32],"approach":[16,43],"based":[17,35],"on":[18,36],"dynamical":[19,27],"systems":[20],"theory.":[21],"In":[22],"order":[23],"to":[24,45],"identify":[25],"the":[26,30,50,54,58,64,67,70,73,80,101],"model":[28,102],"optimization":[33],"algorithm,":[34],"Linear":[37],"Matrix":[38],"Inequalities,":[39],"proposed.":[41],"This":[42],"allows":[44],"take":[46],"into":[47],"account,":[48],"in":[49,87],"identification":[51],"phase,":[52],"both":[53],"experimental":[55],"and":[57,111],"priori":[60],"knowledge":[62],"about":[63],"arcs":[65],"network.":[68],"Furthermore,":[69],"effectiveness":[71],"proposed":[74],"algorithm":[75],"improved":[77],"by":[78,109],"exploiting":[79],"assumption":[81],"scale-free":[83],"structure,":[84],"as":[85],"usual":[86],"processes.":[89],"technique":[91],"validated":[93],"against":[94],"well":[96],"assessed":[97],"case-study,":[98],"that":[99],"fission":[104],"yeast":[105],"cell":[106],"cycle":[107],"developed":[108],"Novak":[110],"Tyson.":[112]},"counts_by_year":[{"year":2021,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
