{"id":"https://openalex.org/W2529646778","doi":"https://doi.org/10.1093/nar/gkw916","title":"PceRBase: a database of plant competing endogenous RNA","display_name":"PceRBase: a database of plant competing endogenous RNA","publication_year":2016,"publication_date":"2016-10-04","ids":{"openalex":"https://openalex.org/W2529646778","doi":"https://doi.org/10.1093/nar/gkw916","mag":"2529646778","pmid":"https://pubmed.ncbi.nlm.nih.gov/28053167"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkw916","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkw916","pdf_url":"https://academic.oup.com/nar/article-pdf/45/D1/D1009/8847154/gkw916.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/article-pdf/45/D1/D1009/8847154/gkw916.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5044674429","display_name":"Chunhui Yuan","orcid":"https://orcid.org/0000-0002-0922-4209"},"institutions":[{"id":"https://openalex.org/I4391768222","display_name":"State Key Laboratory of Plant Physiology and Biochemistry","ror":"https://ror.org/02yjhrp74","country_code":null,"type":"facility","lineage":["https://openalex.org/I4391768222","https://openalex.org/I52158045","https://openalex.org/I76130692"]},{"id":"https://openalex.org/I76130692","display_name":"Zhejiang University","ror":"https://ror.org/00a2xv884","country_code":"CN","type":"education","lineage":["https://openalex.org/I76130692"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Chunhui Yuan","raw_affiliation_strings":["Department of Bioinformatics, State Key Laboratory of Plant Physiology and Biochemistry, Institute of Plant Science, College of Life Sciences, Zhejiang University, Hangzhou 310058, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Bioinformatics, State Key Laboratory of Plant Physiology and Biochemistry, Institute of Plant Science, College of Life Sciences, Zhejiang University, Hangzhou 310058, China","institution_ids":["https://openalex.org/I76130692","https://openalex.org/I4391768222"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5054213249","display_name":"Xianwen Meng","orcid":"https://orcid.org/0000-0001-8547-2936"},"institutions":[{"id":"https://openalex.org/I4391768222","display_name":"State Key Laboratory of Plant Physiology and Biochemistry","ror":"https://ror.org/02yjhrp74","country_code":null,"type":"facility","lineage":["https://openalex.org/I4391768222","https://openalex.org/I52158045","https://openalex.org/I76130692"]},{"id":"https://openalex.org/I76130692","display_name":"Zhejiang University","ror":"https://ror.org/00a2xv884","country_code":"CN","type":"education","lineage":["https://openalex.org/I76130692"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xianwen Meng","raw_affiliation_strings":["Department of Bioinformatics, State Key Laboratory of Plant Physiology and Biochemistry, Institute of Plant Science, College of Life Sciences, Zhejiang University, Hangzhou 310058, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Bioinformatics, State Key Laboratory of Plant Physiology and Biochemistry, Institute of Plant Science, College of Life Sciences, Zhejiang University, Hangzhou 310058, China","institution_ids":["https://openalex.org/I76130692","https://openalex.org/I4391768222"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100372174","display_name":"Xue Li","orcid":"https://orcid.org/0000-0001-9357-3980"},"institutions":[{"id":"https://openalex.org/I4391768222","display_name":"State Key Laboratory of Plant Physiology and Biochemistry","ror":"https://ror.org/02yjhrp74","country_code":null,"type":"facility","lineage":["https://openalex.org/I4391768222","https://openalex.org/I52158045","https://openalex.org/I76130692"]},{"id":"https://openalex.org/I76130692","display_name":"Zhejiang University","ror":"https://ror.org/00a2xv884","country_code":"CN","type":"education","lineage":["https://openalex.org/I76130692"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xue Li","raw_affiliation_strings":["Department of Bioinformatics, State Key Laboratory of Plant Physiology and Biochemistry, Institute of Plant Science, College of Life Sciences, Zhejiang University, Hangzhou 310058, China","James D. Watson Institute of Genome Sciences, Zhejiang University, Hangzhou 310058, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Bioinformatics, State Key Laboratory of Plant Physiology and Biochemistry, Institute of Plant Science, College of Life Sciences, Zhejiang University, Hangzhou 310058, China","institution_ids":["https://openalex.org/I76130692","https://openalex.org/I4391768222"]},{"raw_affiliation_string":"James D. Watson Institute of Genome Sciences, Zhejiang University, Hangzhou 310058, China","institution_ids":["https://openalex.org/I76130692"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5049115860","display_name":"Nicola Illing","orcid":"https://orcid.org/0000-0002-7322-4713"},"institutions":[{"id":"https://openalex.org/I157614274","display_name":"University of Cape Town","ror":"https://ror.org/03p74gp79","country_code":"ZA","type":"education","lineage":["https://openalex.org/I157614274"]}],"countries":["ZA"],"is_corresponding":false,"raw_author_name":"Nicola Illing","raw_affiliation_strings":["Department of Molecular and Cell Biology, University of Cape Town, Rondebosch 7701, South Africa"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Molecular and Cell Biology, University of Cape Town, Rondebosch 7701, South Africa","institution_ids":["https://openalex.org/I157614274"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5045025935","display_name":"Robert A. Ingle","orcid":"https://orcid.org/0000-0002-8362-3777"},"institutions":[{"id":"https://openalex.org/I157614274","display_name":"University of Cape Town","ror":"https://ror.org/03p74gp79","country_code":"ZA","type":"education","lineage":["https://openalex.org/I157614274"]}],"countries":["ZA"],"is_corresponding":false,"raw_author_name":"Robert A. Ingle","raw_affiliation_strings":["Department of Molecular and Cell Biology, University of Cape Town, Rondebosch 7701, South Africa"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Molecular and Cell Biology, University of Cape Town, Rondebosch 7701, South Africa","institution_ids":["https://openalex.org/I157614274"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100426872","display_name":"Jingjing Wang","orcid":"https://orcid.org/0000-0002-6006-2727"},"institutions":[{"id":"https://openalex.org/I4391768222","display_name":"State Key Laboratory of Plant Physiology and Biochemistry","ror":"https://ror.org/02yjhrp74","country_code":null,"type":"facility","lineage":["https://openalex.org/I4391768222","https://openalex.org/I52158045","https://openalex.org/I76130692"]},{"id":"https://openalex.org/I76130692","display_name":"Zhejiang University","ror":"https://ror.org/00a2xv884","country_code":"CN","type":"education","lineage":["https://openalex.org/I76130692"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jingjing Wang","raw_affiliation_strings":["Department of Bioinformatics, State Key Laboratory of Plant Physiology and Biochemistry, Institute of Plant Science, College of Life Sciences, Zhejiang University, Hangzhou 310058, China","James D. Watson Institute of Genome Sciences, Zhejiang University, Hangzhou 310058, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Bioinformatics, State Key Laboratory of Plant Physiology and Biochemistry, Institute of Plant Science, College of Life Sciences, Zhejiang University, Hangzhou 310058, China","institution_ids":["https://openalex.org/I76130692","https://openalex.org/I4391768222"]},{"raw_affiliation_string":"James D. Watson Institute of Genome Sciences, Zhejiang University, Hangzhou 310058, China","institution_ids":["https://openalex.org/I76130692"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5100423292","display_name":"Ming Chen","orcid":"https://orcid.org/0000-0002-9677-1699"},"institutions":[{"id":"https://openalex.org/I4391768222","display_name":"State Key Laboratory of Plant Physiology and Biochemistry","ror":"https://ror.org/02yjhrp74","country_code":null,"type":"facility","lineage":["https://openalex.org/I4391768222","https://openalex.org/I52158045","https://openalex.org/I76130692"]},{"id":"https://openalex.org/I76130692","display_name":"Zhejiang University","ror":"https://ror.org/00a2xv884","country_code":"CN","type":"education","lineage":["https://openalex.org/I76130692"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Ming Chen","raw_affiliation_strings":["Department of Bioinformatics, State Key Laboratory of Plant Physiology and Biochemistry, Institute of Plant Science, College of Life Sciences, Zhejiang University, Hangzhou 310058, China mchen@zju.edu.cn","James D. Watson Institute of Genome Sciences, Zhejiang University, Hangzhou 310058, China","Department of Bioinformatics, State Key Laboratory of Plant Physiology and Biochemistry, Institute of Plant Science, College of Life Sciences, Zhejiang University, Hangzhou 310058, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Bioinformatics, State Key Laboratory of Plant Physiology and Biochemistry, Institute of Plant Science, College of Life Sciences, Zhejiang University, Hangzhou 310058, China mchen@zju.edu.cn","institution_ids":["https://openalex.org/I76130692"]},{"raw_affiliation_string":"James D. Watson Institute of Genome Sciences, Zhejiang University, Hangzhou 310058, China","institution_ids":["https://openalex.org/I76130692"]},{"raw_affiliation_string":"Department of Bioinformatics, State Key Laboratory of Plant Physiology and Biochemistry, Institute of Plant Science, College of Life Sciences, Zhejiang University, Hangzhou 310058, China","institution_ids":["https://openalex.org/I76130692","https://openalex.org/I4391768222"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5100423292"],"corresponding_institution_ids":["https://openalex.org/I4391768222","https://openalex.org/I76130692"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":16.3843,"has_fulltext":false,"cited_by_count":62,"citation_normalized_percentile":{"value":0.98732664,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":96,"max":99},"biblio":{"volume":"45","issue":"D1","first_page":"D1009","last_page":"D1014"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10184","display_name":"Plant Molecular Biology Research","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10184","display_name":"Plant Molecular Biology Research","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10515","display_name":"Cancer-related molecular mechanisms research","score":0.9987999796867371,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11482","display_name":"RNA modifications and cancer","score":0.9968000054359436,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/competing-endogenous-rna","display_name":"Competing endogenous RNA","score":0.9600154161453247},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.8666635155677795},{"id":"https://openalex.org/keywords/microrna","display_name":"microRNA","score":0.7036129236221313},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.6219847202301025},{"id":"https://openalex.org/keywords/rna","display_name":"RNA","score":0.525965690612793},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.470402330160141},{"id":"https://openalex.org/keywords/arabidopsis","display_name":"Arabidopsis","score":0.43090352416038513},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.39333269000053406},{"id":"https://openalex.org/keywords/long-non-coding-rna","display_name":"Long non-coding RNA","score":0.06183770298957825}],"concepts":[{"id":"https://openalex.org/C60365752","wikidata":"https://www.wikidata.org/wiki/Q5156306","display_name":"Competing endogenous RNA","level":5,"score":0.9600154161453247},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.8666635155677795},{"id":"https://openalex.org/C145059251","wikidata":"https://www.wikidata.org/wiki/Q310899","display_name":"microRNA","level":3,"score":0.7036129236221313},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.6219847202301025},{"id":"https://openalex.org/C67705224","wikidata":"https://www.wikidata.org/wiki/Q11053","display_name":"RNA","level":3,"score":0.525965690612793},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.470402330160141},{"id":"https://openalex.org/C2779491563","wikidata":"https://www.wikidata.org/wiki/Q157892","display_name":"Arabidopsis","level":4,"score":0.43090352416038513},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.39333269000053406},{"id":"https://openalex.org/C62203573","wikidata":"https://www.wikidata.org/wiki/Q15087973","display_name":"Long non-coding RNA","level":4,"score":0.06183770298957825},{"id":"https://openalex.org/C143065580","wikidata":"https://www.wikidata.org/wiki/Q3285695","display_name":"Mutant","level":3,"score":0.0}],"mesh":[{"descriptor_ui":"D010944","descriptor_name":"Plants","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D010944","descriptor_name":"Plants","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D010944","descriptor_name":"Plants","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012333","descriptor_name":"RNA, Messenger","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012333","descriptor_name":"RNA, Messenger","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012333","descriptor_name":"RNA, Messenger","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018506","descriptor_name":"Gene Expression Regulation, Plant","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D018506","descriptor_name":"Gene Expression Regulation, Plant","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D018506","descriptor_name":"Gene Expression Regulation, Plant","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D018749","descriptor_name":"RNA, Plant","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D018749","descriptor_name":"RNA, Plant","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D018749","descriptor_name":"RNA, Plant","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D030561","descriptor_name":"Databases, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030561","descriptor_name":"Databases, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030561","descriptor_name":"Databases, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D034622","descriptor_name":"RNA Interference","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D034622","descriptor_name":"RNA Interference","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D034622","descriptor_name":"RNA Interference","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D057386","descriptor_name":"Search Engine","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057386","descriptor_name":"Search Engine","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057386","descriptor_name":"Search Engine","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D064878","descriptor_name":"Web Browser","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D064878","descriptor_name":"Web Browser","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D064878","descriptor_name":"Web Browser","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1093/nar/gkw916","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkw916","pdf_url":"https://academic.oup.com/nar/article-pdf/45/D1/D1009/8847154/gkw916.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:28053167","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/28053167","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:open-archive.highwire.org:nar:45/D1/D1009","is_oa":false,"landing_page_url":"http://nar.oxfordjournals.org/cgi/content/short/45/D1/D1009","pdf_url":null,"source":{"id":"https://openalex.org/S4406923041","display_name":"HighWire Press Open Archive","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"TEXT"},{"id":"pmh:oai:pubmedcentral.nih.gov:5210625","is_oa":true,"landing_page_url":"http://doi.org/10.1093/nar/gkw916","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/nar/gkw916","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkw916","pdf_url":"https://academic.oup.com/nar/article-pdf/45/D1/D1009/8847154/gkw916.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":45,"referenced_works":["https://openalex.org/W1897368039","https://openalex.org/W1920303762","https://openalex.org/W1964113455","https://openalex.org/W1966498224","https://openalex.org/W1971028992","https://openalex.org/W1971623350","https://openalex.org/W1972989638","https://openalex.org/W1997413633","https://openalex.org/W2006556963","https://openalex.org/W2008468705","https://openalex.org/W2017327650","https://openalex.org/W2026570544","https://openalex.org/W2041369142","https://openalex.org/W2060161265","https://openalex.org/W2061548680","https://openalex.org/W2067854876","https://openalex.org/W2072285646","https://openalex.org/W2077327925","https://openalex.org/W2077475358","https://openalex.org/W2095321122","https://openalex.org/W2097065948","https://openalex.org/W2097627545","https://openalex.org/W2097640253","https://openalex.org/W2106812975","https://openalex.org/W2107249189","https://openalex.org/W2109950909","https://openalex.org/W2111407873","https://openalex.org/W2117977572","https://openalex.org/W2128034264","https://openalex.org/W2130687298","https://openalex.org/W2135230723","https://openalex.org/W2135398049","https://openalex.org/W2137672602","https://openalex.org/W2138664009","https://openalex.org/W2141292707","https://openalex.org/W2141458291","https://openalex.org/W2142974180","https://openalex.org/W2145931730","https://openalex.org/W2154825888","https://openalex.org/W2156852055","https://openalex.org/W2162674813","https://openalex.org/W2164154943","https://openalex.org/W2167681032","https://openalex.org/W2167868554","https://openalex.org/W2170561036"],"related_works":["https://openalex.org/W1998618295","https://openalex.org/W3147805512","https://openalex.org/W3135639358","https://openalex.org/W2605415066","https://openalex.org/W2586183753","https://openalex.org/W3134273865","https://openalex.org/W3109014455","https://openalex.org/W2805285958","https://openalex.org/W3031956330","https://openalex.org/W2939950766"],"abstract_inverted_index":{"Competition":[0],"for":[1,14,29,84,157,165],"microRNA":[2,51],"(miRNA)":[3],"binding":[4],"between":[5,127],"RNA":[6,23,43,58],"molecules":[7],"has":[8],"emerged":[9],"as":[10,27],"a":[11,34,89],"novel":[12,184],"mechanism":[13],"the":[15,39,47,147,166,174],"regulation":[16],"of":[17,41,57,136,160,171],"eukaryotic":[18],"gene":[19],"expression.":[20],"Competing":[21],"endogenous":[22],"(ceRNA)":[24],"can":[25,179],"act":[26],"decoys":[28],"miRNA":[30],"binding,":[31],"thereby":[32],"forming":[33],"ceRNA":[35,82,91,98,101,137,175],"network":[36],"by":[37],"regulating":[38],"abundance":[40],"other":[42],"transcripts":[44],"which":[45,95,118],"share":[46],"same":[48],"or":[49],"similar":[50],"response":[52],"elements.":[53],"Although":[54],"this":[55],"type":[56],"cross":[59],"talk":[60],"was":[61,67],"first":[62],"described":[63],"in":[64,73,110,146,173],"Arabidopsis,":[65],"and":[66,100,129,139,155,168,187],"subsequently":[68],"shown":[69],"to":[70,182],"be":[71],"active":[72],"animal":[74],"models,":[75],"there":[76],"is":[77],"no":[78],"database":[79,92],"collecting":[80],"potential":[81,97],"data":[83],"plants.":[85],"We":[86],"have":[87],"developed":[88],"Plant":[90],"(PceRBase,":[93],"http://bis.zju.edu.cn/pcernadb/index.jsp)":[94],"contains":[96],"target-target,":[99],"target-mimic":[102],"pairs":[103,138],"from":[104,190],"26":[105],"plant":[106],"species.":[107],"For":[108],"example,":[109],"Arabidopsis":[111],"lyrata,":[112],"311":[113],"candidate":[114],"ceRNAs":[115],"are":[116,143,163],"identified":[117],"could":[119],"affect":[120],"2646":[121],"target-miRNA-target":[122],"interactions.":[123],"Predicted":[124],"pairing":[125],"structure":[126],"miRNAs":[128],"their":[130,191],"target":[131],"mRNA":[132],"transcripts,":[133],"expression":[134],"levels":[135],"associated":[140],"GO":[141],"annotations":[142],"also":[144],"stored":[145],"database.":[148],"A":[149],"web":[150],"interface":[151],"provides":[152],"convenient":[153],"browsing":[154],"searching":[156],"specific":[158],"genes":[159,172],"interest.":[161],"Tools":[162],"available":[164],"visualization":[167],"enrichment":[169],"analysis":[170],"networks.":[176],"Moreover,":[177],"users":[178],"use":[180],"PceRBase":[181],"predict":[183],"competing":[185],"mimic-target":[186],"target-target":[188],"interactions":[189],"own":[192],"data.":[193]},"counts_by_year":[{"year":2025,"cited_by_count":3},{"year":2024,"cited_by_count":5},{"year":2023,"cited_by_count":4},{"year":2022,"cited_by_count":5},{"year":2021,"cited_by_count":13},{"year":2020,"cited_by_count":8},{"year":2019,"cited_by_count":10},{"year":2018,"cited_by_count":9},{"year":2017,"cited_by_count":5}],"updated_date":"2026-05-21T09:19:25.381259","created_date":"2025-10-10T00:00:00"}
