{"id":"https://openalex.org/W2097311303","doi":"https://doi.org/10.1093/nar/gkm908","title":"The Plant Ontology Database: a community resource for plant structure and developmental stages controlled vocabulary and annotations","display_name":"The Plant Ontology Database: a community resource for plant structure and developmental stages controlled vocabulary and annotations","publication_year":2008,"publication_date":"2008-01-01","ids":{"openalex":"https://openalex.org/W2097311303","doi":"https://doi.org/10.1093/nar/gkm908","mag":"2097311303","pmid":"https://pubmed.ncbi.nlm.nih.gov/18194960"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkm908","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkm908","pdf_url":null,"source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.1093/nar/gkm908","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5059221903","display_name":"Shulamit Avraham","orcid":null},"institutions":[{"id":"https://openalex.org/I2750212522","display_name":"Cold Spring Harbor Laboratory","ror":"https://ror.org/02qz8b764","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I2750212522"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Shulamit Avraham","raw_affiliation_strings":["Cold Spring Harbor Laboratory, 1 Bungtown Road, Cold Spring Harbor, NY 11724, USA","Cold Spring Harbor Laboratory, 1 Bungtown Road, Cold Spring Harbor, NY, 11724, USA"],"affiliations":[{"raw_affiliation_string":"Cold Spring Harbor Laboratory, 1 Bungtown Road, Cold Spring Harbor, NY 11724, USA","institution_ids":["https://openalex.org/I2750212522"]},{"raw_affiliation_string":"Cold Spring Harbor Laboratory, 1 Bungtown Road, Cold Spring Harbor, NY, 11724, USA","institution_ids":["https://openalex.org/I2750212522"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5070915167","display_name":"Chih\u2010Wei Tung","orcid":"https://orcid.org/0000-0001-5337-0177"},"institutions":[{"id":"https://openalex.org/I205783295","display_name":"Cornell University","ror":"https://ror.org/05bnh6r87","country_code":"US","type":"education","lineage":["https://openalex.org/I205783295"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Chih-Wei Tung","raw_affiliation_strings":["Cornell University"],"affiliations":[{"raw_affiliation_string":"Cornell University","institution_ids":["https://openalex.org/I205783295"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5074880239","display_name":"Katica Ilic","orcid":null},"institutions":[{"id":"https://openalex.org/I196817621","display_name":"Carnegie Institution for Science","ror":"https://ror.org/04jr01610","country_code":"US","type":"funder","lineage":["https://openalex.org/I196817621"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Katica Ilic","raw_affiliation_strings":["Carnegie Institution of Washington"],"affiliations":[{"raw_affiliation_string":"Carnegie Institution of Washington","institution_ids":["https://openalex.org/I196817621"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5049418039","display_name":"Pankaj Jaiswal","orcid":"https://orcid.org/0000-0002-1005-8383"},"institutions":[{"id":"https://openalex.org/I205783295","display_name":"Cornell University","ror":"https://ror.org/05bnh6r87","country_code":"US","type":"education","lineage":["https://openalex.org/I205783295"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Pankaj Jaiswal","raw_affiliation_strings":["Cornell University"],"affiliations":[{"raw_affiliation_string":"Cornell University","institution_ids":["https://openalex.org/I205783295"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5068370559","display_name":"Elizabeth A. Kellogg","orcid":"https://orcid.org/0000-0003-1671-7447"},"institutions":[{"id":"https://openalex.org/I76835614","display_name":"University of Missouri","ror":"https://ror.org/02ymw8z06","country_code":"US","type":"education","lineage":["https://openalex.org/I76835614"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Elizabeth A. Kellogg","raw_affiliation_strings":["Univ. of Missouri at St. Louis"],"affiliations":[{"raw_affiliation_string":"Univ. of Missouri at St. Louis","institution_ids":["https://openalex.org/I76835614"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5068320260","display_name":"Susan R. McCouch","orcid":"https://orcid.org/0000-0001-9246-3106"},"institutions":[{"id":"https://openalex.org/I205783295","display_name":"Cornell University","ror":"https://ror.org/05bnh6r87","country_code":"US","type":"education","lineage":["https://openalex.org/I205783295"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Susan McCouch","raw_affiliation_strings":["Cornell University"],"affiliations":[{"raw_affiliation_string":"Cornell University","institution_ids":["https://openalex.org/I205783295"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5086462947","display_name":"Anuradha Pujar","orcid":null},"institutions":[{"id":"https://openalex.org/I205783295","display_name":"Cornell University","ror":"https://ror.org/05bnh6r87","country_code":"US","type":"education","lineage":["https://openalex.org/I205783295"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Anuradha Pujar","raw_affiliation_strings":["Cornell University"],"affiliations":[{"raw_affiliation_string":"Cornell University","institution_ids":["https://openalex.org/I205783295"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5012134423","display_name":"Leonore Reiser","orcid":"https://orcid.org/0000-0003-0073-0858"},"institutions":[{"id":"https://openalex.org/I44187974","display_name":"Molecular Sciences Institute","ror":"https://ror.org/000fyja13","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I44187974"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Leonore Reiser","raw_affiliation_strings":["MOLECULAR SCIENCES INSTITUTE"],"affiliations":[{"raw_affiliation_string":"MOLECULAR SCIENCES INSTITUTE","institution_ids":["https://openalex.org/I44187974"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5076665375","display_name":"Seung Y. Rhee","orcid":"https://orcid.org/0000-0002-7572-4762"},"institutions":[{"id":"https://openalex.org/I196817621","display_name":"Carnegie Institution for Science","ror":"https://ror.org/04jr01610","country_code":"US","type":"funder","lineage":["https://openalex.org/I196817621"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Seung Y Rhee","raw_affiliation_strings":["Carnegie Institution of Washington"],"affiliations":[{"raw_affiliation_string":"Carnegie Institution of Washington","institution_ids":["https://openalex.org/I196817621"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5106133580","display_name":"Martin M. Sachs","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Martin M Sachs","raw_affiliation_strings":["Crop Sciences"],"affiliations":[{"raw_affiliation_string":"Crop Sciences","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5020684113","display_name":"Mary Schaeffer","orcid":"https://orcid.org/0000-0002-9259-3805"},"institutions":[{"id":"https://openalex.org/I76835614","display_name":"University of Missouri","ror":"https://ror.org/02ymw8z06","country_code":"US","type":"education","lineage":["https://openalex.org/I76835614"]},{"id":"https://openalex.org/I1336096307","display_name":"United States Department of Agriculture","ror":"https://ror.org/01na82s61","country_code":"US","type":"government","lineage":["https://openalex.org/I1336096307"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Mary Schaeffer","raw_affiliation_strings":["University of Missouri","United States Department of Agriculture"],"affiliations":[{"raw_affiliation_string":"University of Missouri","institution_ids":["https://openalex.org/I76835614"]},{"raw_affiliation_string":"United States Department of Agriculture","institution_ids":["https://openalex.org/I1336096307"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5052076713","display_name":"Lincoln Stein","orcid":"https://orcid.org/0000-0002-1983-4588"},"institutions":[{"id":"https://openalex.org/I2750212522","display_name":"Cold Spring Harbor Laboratory","ror":"https://ror.org/02qz8b764","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I2750212522"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Lincoln Stein","raw_affiliation_strings":["#N##TAB##TAB##TAB##TAB# Cold Spring Harbor Laboratory#N##TAB##TAB##TAB#"],"affiliations":[{"raw_affiliation_string":"#N##TAB##TAB##TAB##TAB# Cold Spring Harbor Laboratory#N##TAB##TAB##TAB#","institution_ids":["https://openalex.org/I2750212522"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5110536092","display_name":"Peter F. Stevens","orcid":null},"institutions":[{"id":"https://openalex.org/I208333798","display_name":"University of Missouri\u2013St. Louis","ror":"https://ror.org/037cnag11","country_code":"US","type":"education","lineage":["https://openalex.org/I208333798"]},{"id":"https://openalex.org/I2802431724","display_name":"Missouri Botanical Garden","ror":"https://ror.org/04tzy5g14","country_code":"US","type":"archive","lineage":["https://openalex.org/I2802431724"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Peter Stevens","raw_affiliation_strings":["University of Missouri at St. Louis","Missouri Botanical Garden"],"affiliations":[{"raw_affiliation_string":"University of Missouri at St. Louis","institution_ids":["https://openalex.org/I208333798"]},{"raw_affiliation_string":"Missouri Botanical Garden","institution_ids":["https://openalex.org/I2802431724"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5012109916","display_name":"Leszek Vincent","orcid":null},"institutions":[{"id":"https://openalex.org/I76835614","display_name":"University of Missouri","ror":"https://ror.org/02ymw8z06","country_code":"US","type":"education","lineage":["https://openalex.org/I76835614"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Leszek Vincent","raw_affiliation_strings":["University of Missouri ***"],"affiliations":[{"raw_affiliation_string":"University of Missouri ***","institution_ids":["https://openalex.org/I76835614"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5079133387","display_name":"Felipe Zapata","orcid":"https://orcid.org/0000-0002-9386-0573"},"institutions":[{"id":"https://openalex.org/I208333798","display_name":"University of Missouri\u2013St. Louis","ror":"https://ror.org/037cnag11","country_code":"US","type":"education","lineage":["https://openalex.org/I208333798"]},{"id":"https://openalex.org/I2802431724","display_name":"Missouri Botanical Garden","ror":"https://ror.org/04tzy5g14","country_code":"US","type":"archive","lineage":["https://openalex.org/I2802431724"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Felipe Zapata","raw_affiliation_strings":["University of Missouri at St. Louis","Missouri Botanical Garden"],"affiliations":[{"raw_affiliation_string":"University of Missouri at St. Louis","institution_ids":["https://openalex.org/I208333798"]},{"raw_affiliation_string":"Missouri Botanical Garden","institution_ids":["https://openalex.org/I2802431724"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5077105419","display_name":"Doreen Ware","orcid":"https://orcid.org/0000-0002-8125-3821"},"institutions":[{"id":"https://openalex.org/I2750212522","display_name":"Cold Spring Harbor Laboratory","ror":"https://ror.org/02qz8b764","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I2750212522"]},{"id":"https://openalex.org/I1336096307","display_name":"United States Department of Agriculture","ror":"https://ror.org/01na82s61","country_code":"US","type":"government","lineage":["https://openalex.org/I1336096307"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Doreen Ware","raw_affiliation_strings":["United States Department of Agriculture","Cold Spring Harbor Laboratory"],"affiliations":[{"raw_affiliation_string":"United States Department of Agriculture","institution_ids":["https://openalex.org/I1336096307"]},{"raw_affiliation_string":"Cold Spring Harbor Laboratory","institution_ids":["https://openalex.org/I2750212522"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":16,"corresponding_author_ids":["https://openalex.org/A5059221903"],"corresponding_institution_ids":["https://openalex.org/I2750212522"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":5.6705,"has_fulltext":false,"cited_by_count":151,"citation_normalized_percentile":{"value":0.96800438,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":95,"max":100},"biblio":{"volume":"36","issue":"suppl_1","first_page":"D449","last_page":"D454"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9879000186920166,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9879000186920166,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.978600025177002,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9690999984741211,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/ontology","display_name":"Ontology","score":0.7762933373451233},{"id":"https://openalex.org/keywords/controlled-vocabulary","display_name":"Controlled vocabulary","score":0.6122550964355469},{"id":"https://openalex.org/keywords/vocabulary","display_name":"Vocabulary","score":0.6054562330245972},{"id":"https://openalex.org/keywords/resource","display_name":"Resource (disambiguation)","score":0.5709224939346313},{"id":"https://openalex.org/keywords/gene-ontology","display_name":"Gene ontology","score":0.553644597530365},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.5085710287094116},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.4952341616153717},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.4756700098514557},{"id":"https://openalex.org/keywords/biological-database","display_name":"Biological database","score":0.4373752176761627},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.3290838301181793},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.22700229287147522},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.1666657030582428},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.0731530487537384}],"concepts":[{"id":"https://openalex.org/C25810664","wikidata":"https://www.wikidata.org/wiki/Q44325","display_name":"Ontology","level":2,"score":0.7762933373451233},{"id":"https://openalex.org/C110615152","wikidata":"https://www.wikidata.org/wiki/Q1469824","display_name":"Controlled vocabulary","level":2,"score":0.6122550964355469},{"id":"https://openalex.org/C2777601683","wikidata":"https://www.wikidata.org/wiki/Q6499736","display_name":"Vocabulary","level":2,"score":0.6054562330245972},{"id":"https://openalex.org/C206345919","wikidata":"https://www.wikidata.org/wiki/Q20380951","display_name":"Resource (disambiguation)","level":2,"score":0.5709224939346313},{"id":"https://openalex.org/C2987395477","wikidata":"https://www.wikidata.org/wiki/Q135085","display_name":"Gene ontology","level":4,"score":0.553644597530365},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.5085710287094116},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.4952341616153717},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.4756700098514557},{"id":"https://openalex.org/C20901353","wikidata":"https://www.wikidata.org/wiki/Q4117139","display_name":"Biological database","level":2,"score":0.4373752176761627},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.3290838301181793},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.22700229287147522},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.1666657030582428},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.0731530487537384},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.0},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C31258907","wikidata":"https://www.wikidata.org/wiki/Q1301371","display_name":"Computer network","level":1,"score":0.0},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.0}],"mesh":[{"descriptor_ui":"D010944","descriptor_name":"Plants","qualifier_ui":"Q000033","qualifier_name":"anatomy & histology","is_major_topic":false},{"descriptor_ui":"D010944","descriptor_name":"Plants","qualifier_ui":"Q000033","qualifier_name":"anatomy & histology","is_major_topic":false},{"descriptor_ui":"D010944","descriptor_name":"Plants","qualifier_ui":"Q000033","qualifier_name":"anatomy & histology","is_major_topic":false},{"descriptor_ui":"D010944","descriptor_name":"Plants","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D010944","descriptor_name":"Plants","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D010944","descriptor_name":"Plants","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017343","descriptor_name":"Genes, Plant","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017343","descriptor_name":"Genes, Plant","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017343","descriptor_name":"Genes, Plant","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018745","descriptor_name":"Genome, Plant","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D018745","descriptor_name":"Genome, Plant","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D018745","descriptor_name":"Genome, Plant","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D018875","descriptor_name":"Vocabulary, Controlled","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D018875","descriptor_name":"Vocabulary, Controlled","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D018875","descriptor_name":"Vocabulary, Controlled","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D063245","descriptor_name":"Plant Development","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D063245","descriptor_name":"Plant Development","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D063245","descriptor_name":"Plant Development","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":5,"locations":[{"id":"doi:10.1093/nar/gkm908","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkm908","pdf_url":null,"source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:18194960","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/18194960","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:repository.cshl.edu:27593","is_oa":false,"landing_page_url":null,"pdf_url":null,"source":{"id":"https://openalex.org/S4306402288","display_name":"Cold Spring Harbor Laboratory Institutional Repository (Cold Spring Harbor Laboratory)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I2750212522","host_organization_name":"Cold Spring Harbor Laboratory","host_organization_lineage":["https://openalex.org/I2750212522"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":"","raw_type":null},{"id":"pmh:oai:irl.umsl.edu:biology-faculty-1051","is_oa":false,"landing_page_url":"https://irl.umsl.edu/biology-faculty/52","pdf_url":null,"source":{"id":"https://openalex.org/S4377196466","display_name":"IRL - University of Missouri, St. Louis (University of Missouri\u2013St. Louis)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I208333798","host_organization_name":"University of Missouri\u2013St. Louis","host_organization_lineage":["https://openalex.org/I208333798"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Biology Department Faculty Works","raw_type":"text"},{"id":"pmh:oai:pubmedcentral.nih.gov:2238838","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/2238838","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nucleic Acids Res","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/nar/gkm908","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkm908","pdf_url":null,"source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G848032724","display_name":null,"funder_award_id":"Science","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"}],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"},{"id":"https://openalex.org/F4320306114","display_name":"U.S. Department of Agriculture","ror":"https://ror.org/01na82s61"},{"id":"https://openalex.org/F4320332605","display_name":"Agricultural Research Service","ror":"https://ror.org/02d2m2044"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":12,"referenced_works":["https://openalex.org/W1527927437","https://openalex.org/W1757909678","https://openalex.org/W2023113485","https://openalex.org/W2035806597","https://openalex.org/W2059160066","https://openalex.org/W2105889691","https://openalex.org/W2110086535","https://openalex.org/W2124879678","https://openalex.org/W2124922304","https://openalex.org/W2140300290","https://openalex.org/W2152497088","https://openalex.org/W2168340032"],"related_works":["https://openalex.org/W1989811317","https://openalex.org/W3202867831","https://openalex.org/W1597990569","https://openalex.org/W2017301218","https://openalex.org/W2132784310","https://openalex.org/W2168340032","https://openalex.org/W2135708477","https://openalex.org/W2110086535","https://openalex.org/W2136890152","https://openalex.org/W1969271108"],"abstract_inverted_index":{"The":[0,34,70,134],"Plant":[1],"Ontology":[2,79],"Consortium":[3,80,135],"(POC,":[4],"http://www.plantontology.org)":[5],"is":[6],"a":[7,28,60,123,164],"collaborative":[8],"effort":[9],"among":[10],"model":[11],"plant":[12,16,42],"genome":[13],"databases":[14],"and":[15,23,45,47,56,67,84,91,111,117,132,150,181],"researchers":[17],"that":[18],"aims":[19],"to":[20,38,50,58,63,105,141,154,174],"create,":[21],"maintain":[22],"facilitate":[24,142],"the":[25,77,86,95,143,152,156,171,175],"use":[26],"of":[27,41,102,109,145,167],"controlled":[29],"vocabulary":[30],"(ontology)":[31],"for":[32,129],"plants.":[33],"ontology":[35,103],"allows":[36],"users":[37],"ascribe":[39],"attributes":[40],"structure":[43],"(anatomy":[44],"morphology)":[46],"developmental":[48],"stages":[49],"data":[51,177],"types,":[52],"such":[53],"as":[54],"genes":[55,110],"phenotypes,":[57],"provide":[59],"semantic":[61],"framework":[62],"make":[64],"meaningful":[65],"cross-species":[66],"database":[68,92],"comparisons.":[69],"POC":[71,98],"builds":[72],"upon":[73],"groundbreaking":[74],"work":[75],"by":[76,82],"Gene":[78],"(GOC)":[81],"adopting":[83],"extending":[85],"GOC's":[87],"principles,":[88],"existing":[89],"software":[90],"structure.":[93],"Over":[94],"past":[96],"year,":[97],"has":[99,136],"added":[100],"hundreds":[101],"terms":[104],"associate":[106],"with":[107],"thousands":[108],"gene":[112],"products":[113],"from":[114,170],"Arabidopsis,":[115],"rice":[116],"maize,":[118],"which":[119],"are":[120],"available":[121,169],"through":[122],"newly":[124],"updated":[125,151],"web-based":[126],"browser":[127],"(http://www.plantontology.org/amigo/go.cgi)":[128],"viewing,":[130],"searching":[131],"querying.":[133],"also":[137],"implemented":[138],"new":[139],"functionalities":[140],"application":[144],"PO":[146],"in":[147],"genomic":[148],"research":[149],"website":[153],"keep":[155],"contents":[157],"current.":[158],"In":[159],"this":[160],"report,":[161],"we":[162],"present":[163],"brief":[165],"description":[166],"resources":[168],"website,":[172],"changes":[173],"interfaces,":[176],"updates,":[178],"community":[179],"activities":[180],"future":[182],"enhancement.":[183]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":2},{"year":2024,"cited_by_count":6},{"year":2023,"cited_by_count":4},{"year":2022,"cited_by_count":7},{"year":2021,"cited_by_count":6},{"year":2020,"cited_by_count":3},{"year":2019,"cited_by_count":4},{"year":2018,"cited_by_count":4},{"year":2017,"cited_by_count":8},{"year":2016,"cited_by_count":10},{"year":2015,"cited_by_count":7},{"year":2014,"cited_by_count":6},{"year":2013,"cited_by_count":19},{"year":2012,"cited_by_count":22}],"updated_date":"2026-04-10T15:06:20.359241","created_date":"2025-10-10T00:00:00"}
