{"id":"https://openalex.org/W4376503777","doi":"https://doi.org/10.1093/nar/gkad390","title":"Breeze 2.0: an interactive web-tool for visual analysis and comparison of drug response data","display_name":"Breeze 2.0: an interactive web-tool for visual analysis and comparison of drug response data","publication_year":2023,"publication_date":"2023-05-13","ids":{"openalex":"https://openalex.org/W4376503777","doi":"https://doi.org/10.1093/nar/gkad390","pmid":"https://pubmed.ncbi.nlm.nih.gov/37178002"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkad390","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkad390","pdf_url":"https://academic.oup.com/nar/advance-article-pdf/doi/10.1093/nar/gkad390/50310157/gkad390.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/advance-article-pdf/doi/10.1093/nar/gkad390/50310157/gkad390.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5053034632","display_name":"Swapnil Potdar","orcid":"https://orcid.org/0000-0002-2778-6918"},"institutions":[{"id":"https://openalex.org/I133731052","display_name":"University of Helsinki","ror":"https://ror.org/040af2s02","country_code":"FI","type":"education","lineage":["https://openalex.org/I133731052"]},{"id":"https://openalex.org/I4210133586","display_name":"Institute for Molecular Medicine Finland","ror":"https://ror.org/030sbze61","country_code":"FI","type":"facility","lineage":["https://openalex.org/I133731052","https://openalex.org/I4210133586"]}],"countries":["FI"],"is_corresponding":true,"raw_author_name":"Swapnil Potdar","raw_affiliation_strings":["Institute for Molecular Medicine Finland (FIMM), HiLIFE, University of Helsinki , Finland"],"affiliations":[{"raw_affiliation_string":"Institute for Molecular Medicine Finland (FIMM), HiLIFE, University of Helsinki , Finland","institution_ids":["https://openalex.org/I4210133586","https://openalex.org/I133731052"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5091941244","display_name":"Filipp Ianevski","orcid":null},"institutions":[{"id":"https://openalex.org/I133731052","display_name":"University of Helsinki","ror":"https://ror.org/040af2s02","country_code":"FI","type":"education","lineage":["https://openalex.org/I133731052"]},{"id":"https://openalex.org/I4210133586","display_name":"Institute for Molecular Medicine Finland","ror":"https://ror.org/030sbze61","country_code":"FI","type":"facility","lineage":["https://openalex.org/I133731052","https://openalex.org/I4210133586"]}],"countries":["FI"],"is_corresponding":false,"raw_author_name":"Filipp Ianevski","raw_affiliation_strings":["Institute for Molecular Medicine Finland (FIMM), HiLIFE, University of Helsinki , Finland"],"affiliations":[{"raw_affiliation_string":"Institute for Molecular Medicine Finland (FIMM), HiLIFE, University of Helsinki , Finland","institution_ids":["https://openalex.org/I4210133586","https://openalex.org/I133731052"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5070170202","display_name":"Aleksandr Ianevski","orcid":"https://orcid.org/0000-0002-7780-482X"},"institutions":[{"id":"https://openalex.org/I133731052","display_name":"University of Helsinki","ror":"https://ror.org/040af2s02","country_code":"FI","type":"education","lineage":["https://openalex.org/I133731052"]},{"id":"https://openalex.org/I4210133586","display_name":"Institute for Molecular Medicine Finland","ror":"https://ror.org/030sbze61","country_code":"FI","type":"facility","lineage":["https://openalex.org/I133731052","https://openalex.org/I4210133586"]}],"countries":["FI"],"is_corresponding":false,"raw_author_name":"Aleksandr Ianevski","raw_affiliation_strings":["Institute for Molecular Medicine Finland (FIMM), HiLIFE, University of Helsinki , Finland"],"affiliations":[{"raw_affiliation_string":"Institute for Molecular Medicine Finland (FIMM), HiLIFE, University of Helsinki , Finland","institution_ids":["https://openalex.org/I4210133586","https://openalex.org/I133731052"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5084617577","display_name":"Ziaurrehman Tanoli","orcid":"https://orcid.org/0000-0003-2435-9862"},"institutions":[{"id":"https://openalex.org/I133731052","display_name":"University of Helsinki","ror":"https://ror.org/040af2s02","country_code":"FI","type":"education","lineage":["https://openalex.org/I133731052"]},{"id":"https://openalex.org/I4210133586","display_name":"Institute for Molecular Medicine Finland","ror":"https://ror.org/030sbze61","country_code":"FI","type":"facility","lineage":["https://openalex.org/I133731052","https://openalex.org/I4210133586"]}],"countries":["FI"],"is_corresponding":false,"raw_author_name":"Ziaurrehman Tanoli","raw_affiliation_strings":["Institute for Molecular Medicine Finland (FIMM), HiLIFE, University of Helsinki , Finland"],"affiliations":[{"raw_affiliation_string":"Institute for Molecular Medicine Finland (FIMM), HiLIFE, University of Helsinki , Finland","institution_ids":["https://openalex.org/I4210133586","https://openalex.org/I133731052"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5067760174","display_name":"Krister Wennerberg","orcid":"https://orcid.org/0000-0002-1352-4220"},"institutions":[{"id":"https://openalex.org/I124055696","display_name":"University of Copenhagen","ror":"https://ror.org/035b05819","country_code":"DK","type":"education","lineage":["https://openalex.org/I124055696"]}],"countries":["DK"],"is_corresponding":false,"raw_author_name":"Krister Wennerberg","raw_affiliation_strings":["Biotech Research & Innovation Centre (BRIC), University of Copenhagen , Copenhagen, Denmark"],"affiliations":[{"raw_affiliation_string":"Biotech Research & Innovation Centre (BRIC), University of Copenhagen , Copenhagen, Denmark","institution_ids":["https://openalex.org/I124055696"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5051159339","display_name":"Brinton Seashore\u2010Ludlow","orcid":"https://orcid.org/0000-0001-8658-5967"},"institutions":[{"id":"https://openalex.org/I2800139495","display_name":"Science for Life Laboratory","ror":"https://ror.org/04ev03g22","country_code":"SE","type":"facility","lineage":["https://openalex.org/I2800139495"]},{"id":"https://openalex.org/I28166907","display_name":"Karolinska Institutet","ror":"https://ror.org/056d84691","country_code":"SE","type":"education","lineage":["https://openalex.org/I28166907"]}],"countries":["SE"],"is_corresponding":false,"raw_author_name":"Brinton Seashore-Ludlow","raw_affiliation_strings":["Department of Medical Biochemistry and Biophysics, Chemical Biology Consortium Sweden (CBCS), Science for Life Laboratory, Karolinska Institutet , Stockholm , Sweden","Department of Oncology-Pathology, Science for Life Laboratory, Karolinska Institutet , Stockholm , Sweden"],"affiliations":[{"raw_affiliation_string":"Department of Medical Biochemistry and Biophysics, Chemical Biology Consortium Sweden (CBCS), Science for Life Laboratory, Karolinska Institutet , Stockholm , Sweden","institution_ids":["https://openalex.org/I2800139495","https://openalex.org/I28166907"]},{"raw_affiliation_string":"Department of Oncology-Pathology, Science for Life Laboratory, Karolinska Institutet , Stockholm , Sweden","institution_ids":["https://openalex.org/I2800139495","https://openalex.org/I28166907"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5050670008","display_name":"Olli Kallioniemi","orcid":"https://orcid.org/0000-0002-3231-0332"},"institutions":[{"id":"https://openalex.org/I2800139495","display_name":"Science for Life Laboratory","ror":"https://ror.org/04ev03g22","country_code":"SE","type":"facility","lineage":["https://openalex.org/I2800139495"]},{"id":"https://openalex.org/I28166907","display_name":"Karolinska Institutet","ror":"https://ror.org/056d84691","country_code":"SE","type":"education","lineage":["https://openalex.org/I28166907"]}],"countries":["SE"],"is_corresponding":false,"raw_author_name":"Olli Kallioniemi","raw_affiliation_strings":["Department of Oncology-Pathology, Science for Life Laboratory, Karolinska Institutet , Stockholm , Sweden"],"affiliations":[{"raw_affiliation_string":"Department of Oncology-Pathology, Science for Life Laboratory, Karolinska Institutet , Stockholm , Sweden","institution_ids":["https://openalex.org/I2800139495","https://openalex.org/I28166907"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5078078476","display_name":"P\u00e4ivi \u00d6stling","orcid":"https://orcid.org/0000-0001-5501-466X"},"institutions":[{"id":"https://openalex.org/I2800139495","display_name":"Science for Life Laboratory","ror":"https://ror.org/04ev03g22","country_code":"SE","type":"facility","lineage":["https://openalex.org/I2800139495"]},{"id":"https://openalex.org/I28166907","display_name":"Karolinska Institutet","ror":"https://ror.org/056d84691","country_code":"SE","type":"education","lineage":["https://openalex.org/I28166907"]}],"countries":["SE"],"is_corresponding":false,"raw_author_name":"P\u00e4ivi \u00d6stling","raw_affiliation_strings":["Department of Oncology-Pathology, Science for Life Laboratory, Karolinska Institutet , Stockholm , Sweden"],"affiliations":[{"raw_affiliation_string":"Department of Oncology-Pathology, Science for Life Laboratory, Karolinska Institutet , Stockholm , Sweden","institution_ids":["https://openalex.org/I2800139495","https://openalex.org/I28166907"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5016681267","display_name":"Tero Aittokallio","orcid":"https://orcid.org/0000-0002-0886-9769"},"institutions":[{"id":"https://openalex.org/I1281400175","display_name":"Oslo University Hospital","ror":"https://ror.org/00j9c2840","country_code":"NO","type":"healthcare","lineage":["https://openalex.org/I1281400175"]},{"id":"https://openalex.org/I133731052","display_name":"University of Helsinki","ror":"https://ror.org/040af2s02","country_code":"FI","type":"education","lineage":["https://openalex.org/I133731052"]},{"id":"https://openalex.org/I184942183","display_name":"University of Oslo","ror":"https://ror.org/01xtthb56","country_code":"NO","type":"education","lineage":["https://openalex.org/I184942183"]},{"id":"https://openalex.org/I4210133586","display_name":"Institute for Molecular Medicine Finland","ror":"https://ror.org/030sbze61","country_code":"FI","type":"facility","lineage":["https://openalex.org/I133731052","https://openalex.org/I4210133586"]}],"countries":["FI","NO"],"is_corresponding":false,"raw_author_name":"Tero Aittokallio","raw_affiliation_strings":["Centre for Biostatistics and Epidemiology (OCBE), Faculty of Medicine, University of Oslo , Norway","Department of Cancer Genetics, Institute for Cancer Research, Oslo University Hospital , Norway","Institute for Molecular Medicine Finland (FIMM), HiLIFE, University of Helsinki , Finland"],"affiliations":[{"raw_affiliation_string":"Centre for Biostatistics and Epidemiology (OCBE), Faculty of Medicine, University of Oslo , Norway","institution_ids":["https://openalex.org/I184942183"]},{"raw_affiliation_string":"Department of Cancer Genetics, Institute for Cancer Research, Oslo University Hospital , Norway","institution_ids":["https://openalex.org/I1281400175"]},{"raw_affiliation_string":"Institute for Molecular Medicine Finland (FIMM), HiLIFE, University of Helsinki , Finland","institution_ids":["https://openalex.org/I4210133586","https://openalex.org/I133731052"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5062171296","display_name":"Jani Saarela","orcid":"https://orcid.org/0000-0001-7306-7175"},"institutions":[{"id":"https://openalex.org/I133731052","display_name":"University of Helsinki","ror":"https://ror.org/040af2s02","country_code":"FI","type":"education","lineage":["https://openalex.org/I133731052"]},{"id":"https://openalex.org/I4210133586","display_name":"Institute for Molecular Medicine Finland","ror":"https://ror.org/030sbze61","country_code":"FI","type":"facility","lineage":["https://openalex.org/I133731052","https://openalex.org/I4210133586"]}],"countries":["FI"],"is_corresponding":false,"raw_author_name":"Jani Saarela","raw_affiliation_strings":["Institute for Molecular Medicine Finland (FIMM), HiLIFE, University of Helsinki , Finland"],"affiliations":[{"raw_affiliation_string":"Institute for Molecular Medicine Finland (FIMM), HiLIFE, University of Helsinki , Finland","institution_ids":["https://openalex.org/I4210133586","https://openalex.org/I133731052"]}]}],"institutions":[],"countries_distinct_count":4,"institutions_distinct_count":10,"corresponding_author_ids":["https://openalex.org/A5053034632"],"corresponding_institution_ids":["https://openalex.org/I133731052","https://openalex.org/I4210133586"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3383,"currency":"EUR","value_usd":3648},"fwci":3.9186,"has_fulltext":true,"cited_by_count":20,"citation_normalized_percentile":{"value":0.94633256,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":94,"max":100},"biblio":{"volume":"51","issue":"W1","first_page":"W57","last_page":"W61"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9962999820709229,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10836","display_name":"Metabolomics and Mass Spectrometry Studies","score":0.9930999875068665,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/visualization","display_name":"Visualization","score":0.7726418972015381},{"id":"https://openalex.org/keywords/upload","display_name":"Upload","score":0.7101876139640808},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6665387153625488},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.5332241654396057},{"id":"https://openalex.org/keywords/pipeline","display_name":"Pipeline (software)","score":0.4987800121307373},{"id":"https://openalex.org/keywords/interface","display_name":"Interface (matter)","score":0.49192023277282715},{"id":"https://openalex.org/keywords/data-visualization","display_name":"Data visualization","score":0.49060264229774475},{"id":"https://openalex.org/keywords/reliability","display_name":"Reliability (semiconductor)","score":0.4496748745441437},{"id":"https://openalex.org/keywords/interactive-visualization","display_name":"Interactive visualization","score":0.43859967589378357},{"id":"https://openalex.org/keywords/web-application","display_name":"Web application","score":0.4222193956375122},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.37695592641830444},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.34800827503204346},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.3214961886405945},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.17616957426071167}],"concepts":[{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.7726418972015381},{"id":"https://openalex.org/C71901391","wikidata":"https://www.wikidata.org/wiki/Q7126699","display_name":"Upload","level":2,"score":0.7101876139640808},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6665387153625488},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.5332241654396057},{"id":"https://openalex.org/C43521106","wikidata":"https://www.wikidata.org/wiki/Q2165493","display_name":"Pipeline (software)","level":2,"score":0.4987800121307373},{"id":"https://openalex.org/C113843644","wikidata":"https://www.wikidata.org/wiki/Q901882","display_name":"Interface (matter)","level":4,"score":0.49192023277282715},{"id":"https://openalex.org/C172367668","wikidata":"https://www.wikidata.org/wiki/Q6504956","display_name":"Data visualization","level":3,"score":0.49060264229774475},{"id":"https://openalex.org/C43214815","wikidata":"https://www.wikidata.org/wiki/Q7310987","display_name":"Reliability (semiconductor)","level":3,"score":0.4496748745441437},{"id":"https://openalex.org/C64073096","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Interactive visualization","level":3,"score":0.43859967589378357},{"id":"https://openalex.org/C118643609","wikidata":"https://www.wikidata.org/wiki/Q189210","display_name":"Web application","level":2,"score":0.4222193956375122},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.37695592641830444},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.34800827503204346},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.3214961886405945},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.17616957426071167},{"id":"https://openalex.org/C129307140","wikidata":"https://www.wikidata.org/wiki/Q6795880","display_name":"Maximum bubble pressure method","level":3,"score":0.0},{"id":"https://openalex.org/C173608175","wikidata":"https://www.wikidata.org/wiki/Q232661","display_name":"Parallel computing","level":1,"score":0.0},{"id":"https://openalex.org/C157915830","wikidata":"https://www.wikidata.org/wiki/Q2928001","display_name":"Bubble","level":2,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C62520636","wikidata":"https://www.wikidata.org/wiki/Q944","display_name":"Quantum mechanics","level":1,"score":0.0},{"id":"https://openalex.org/C163258240","wikidata":"https://www.wikidata.org/wiki/Q25342","display_name":"Power (physics)","level":2,"score":0.0},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004353","descriptor_name":"Drug Evaluation, Preclinical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D004353","descriptor_name":"Drug Evaluation, Preclinical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D004353","descriptor_name":"Drug Evaluation, Preclinical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":6,"locations":[{"id":"doi:10.1093/nar/gkad390","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkad390","pdf_url":"https://academic.oup.com/nar/advance-article-pdf/doi/10.1093/nar/gkad390/50310157/gkad390.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:37178002","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/37178002","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:10320147","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/10320147","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC10320147/pdf/gkad390.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nucleic Acids Res","raw_type":"Text"},{"id":"pmh:oai:ntnuopen.ntnu.no:11250/3100409","is_oa":true,"landing_page_url":"https://hdl.handle.net/11250/3100409","pdf_url":null,"source":{"id":"https://openalex.org/S4306401716","display_name":"Duo Research Archive (University of Oslo)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I184942183","host_organization_name":"University of Oslo","host_organization_lineage":["https://openalex.org/I184942183"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"W57-W61","raw_type":"info:eu-repo/semantics/other"},{"id":"pmh:oai:pure.atira.dk:openaire_cris_publications/77e0ce2e-f138-4682-b888-cf7e91cda654","is_oa":true,"landing_page_url":"https://researchprofiles.ku.dk/da/publications/77e0ce2e-f138-4682-b888-cf7e91cda654","pdf_url":null,"source":{"id":"https://openalex.org/S4306401983","display_name":"Research at the University of Copenhagen (University of Copenhagen)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I124055696","host_organization_name":"University of Copenhagen","host_organization_lineage":["https://openalex.org/I124055696"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Potdar , S , Ianevski , F , Ianevski , A , Tanoli , Z , Wennerberg , K , Seashore-Ludlow , B , Kallioniemi , O , Ostling , P , Aittokallio , T & Saarela , J 2023 , ' Breeze 2.0 : an interactive web-tool for visual analysis and comparison of drug response data ' , Nucleic Acids Research , vol. 51 , no. W1 , pp. W57-W61 . https://doi.org/10.1093/nar/gkad390","raw_type":"article"},{"id":"pmh:oai:www.duo.uio.no:10852/105870","is_oa":true,"landing_page_url":"http://hdl.handle.net/10852/105870","pdf_url":null,"source":{"id":"https://openalex.org/S4306401717","display_name":"Duo Research Archive (University of Oslo)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I184942183","host_organization_name":"University of Oslo","host_organization_lineage":["https://openalex.org/I184942183"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"0305-1048","raw_type":"info:eu-repo/semantics/article"}],"best_oa_location":{"id":"doi:10.1093/nar/gkad390","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkad390","pdf_url":"https://academic.oup.com/nar/advance-article-pdf/doi/10.1093/nar/gkad390/50310157/gkad390.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/3","display_name":"Good health and well-being","score":0.5199999809265137}],"awards":[{"id":"https://openalex.org/G1310297270","display_name":null,"funder_award_id":"2020-0182","funder_id":"https://openalex.org/F4320322327","funder_display_name":"Knut och Alice Wallenbergs Stiftelse"},{"id":"https://openalex.org/G1983157848","display_name":null,"funder_award_id":"2015.0291","funder_id":"https://openalex.org/F4320322327","funder_display_name":"Knut och Alice Wallenbergs Stiftelse"},{"id":"https://openalex.org/G2275707057","display_name":null,"funder_award_id":"KAW 2020-0182","funder_id":"https://openalex.org/F4320322327","funder_display_name":"Knut och Alice Wallenbergs Stiftelse"},{"id":"https://openalex.org/G2300648853","display_name":null,"funder_award_id":"KAW 2020.0241","funder_id":"https://openalex.org/F4320322327","funder_display_name":"Knut och Alice Wallenbergs Stiftelse"},{"id":"https://openalex.org/G2351186640","display_name":null,"funder_award_id":"101057442","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"},{"id":"https://openalex.org/G329941513","display_name":null,"funder_award_id":"340141","funder_id":"https://openalex.org/F4320321108","funder_display_name":"Academy of Finland"},{"id":"https://openalex.org/G3732400637","display_name":null,"funder_award_id":"326238","funder_id":"https://openalex.org/F4320321108","funder_display_name":"Academy of Finland"},{"id":"https://openalex.org/G4362438806","display_name":"AI technologies for interaction prediction in biomedicine","funder_award_id":"345803","funder_id":"https://openalex.org/F4320321108","funder_display_name":"Academy of Finland"},{"id":"https://openalex.org/G4719929683","display_name":null,"funder_award_id":"345803","funder_id":"https://openalex.org/F4320321108","funder_display_name":"Academy of Finland"},{"id":"https://openalex.org/G5066627347","display_name":null,"funder_award_id":"344698","funder_id":"https://openalex.org/F4320321108","funder_display_name":"Academy of Finland"},{"id":"https://openalex.org/G5317956557","display_name":null,"funder_award_id":"2020.","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"},{"id":"https://openalex.org/G561944777","display_name":null,"funder_award_id":"101057442","funder_id":"https://openalex.org/F4320334322","funder_display_name":"HORIZON EUROPE Framework Programme"},{"id":"https://openalex.org/G658884509","display_name":null,"funder_award_id":"V-2020-0699","funder_id":"https://openalex.org/F4320322327","funder_display_name":"Knut och Alice Wallenbergs Stiftelse"},{"id":"https://openalex.org/G6884867520","display_name":null,"funder_award_id":"2020.0241","funder_id":"https://openalex.org/F4320322327","funder_display_name":"Knut och Alice Wallenbergs Stiftelse"},{"id":"https://openalex.org/G7701213674","display_name":"Tailoring the targeted treatment of chronic lymphocytic leukemia","funder_award_id":"344698","funder_id":"https://openalex.org/F4320321108","funder_display_name":"Academy of Finland"},{"id":"https://openalex.org/G8194661698","display_name":"Machine Learning for Systems Pharmacology","funder_award_id":"340141","funder_id":"https://openalex.org/F4320321108","funder_display_name":"Academy of Finland"},{"id":"https://openalex.org/G8318064016","display_name":null,"funder_award_id":"Horizon","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"},{"id":"https://openalex.org/G8683756101","display_name":null,"funder_award_id":"support","funder_id":"https://openalex.org/F4320322327","funder_display_name":"Knut och Alice Wallenbergs Stiftelse"}],"funders":[{"id":"https://openalex.org/F4320320300","display_name":"European Commission","ror":"https://ror.org/00k4n6c32"},{"id":"https://openalex.org/F4320321108","display_name":"Academy of Finland","ror":"https://ror.org/05k73zm37"},{"id":"https://openalex.org/F4320322327","display_name":"Knut och Alice Wallenbergs Stiftelse","ror":"https://ror.org/004hzzk67"},{"id":"https://openalex.org/F4320328139","display_name":"Biocenter Finland","ror":"https://ror.org/03aay6c48"},{"id":"https://openalex.org/F4320334322","display_name":"HORIZON EUROPE Framework Programme","ror":null}],"has_content":{"pdf":true,"grobid_xml":false},"content_urls":{"pdf":"https://content.openalex.org/works/W4376503777.pdf"},"referenced_works_count":18,"referenced_works":["https://openalex.org/W1967105697","https://openalex.org/W2002783575","https://openalex.org/W2034351069","https://openalex.org/W2115517051","https://openalex.org/W2123059506","https://openalex.org/W2759360483","https://openalex.org/W2896002881","https://openalex.org/W2912102458","https://openalex.org/W2912942083","https://openalex.org/W2997205765","https://openalex.org/W3010256878","https://openalex.org/W3042225370","https://openalex.org/W3124786886","https://openalex.org/W3183825217","https://openalex.org/W3214427435","https://openalex.org/W4220975950","https://openalex.org/W4226021863","https://openalex.org/W6758505178"],"related_works":["https://openalex.org/W2006240110","https://openalex.org/W2751110224","https://openalex.org/W4288663999","https://openalex.org/W3142151604","https://openalex.org/W2137394710","https://openalex.org/W1973315673","https://openalex.org/W1510524001","https://openalex.org/W2996372188","https://openalex.org/W2147036980","https://openalex.org/W2905018186"],"abstract_inverted_index":{"Functional":[0],"precision":[1],"medicine":[2],"(fPM)":[3],"offers":[4],"an":[5,77],"exciting,":[6],"simplified":[7],"approach":[8],"to":[9,37,51,162],"finding":[10],"the":[11,31,68],"right":[12],"applications":[13,167],"for":[14,96],"existing":[15],"molecules":[16],"and":[17,22,28,58,89,101,108,119,143,148],"enhancing":[18],"therapeutic":[19],"potential.":[20],"Integrative":[21],"robust":[23],"tools":[24],"ensuring":[25,102],"high":[26],"accuracy":[27],"reliability":[29],"of":[30,71,79,105,121,140,171],"results":[32],"are":[33,94],"critical.":[34],"In":[35],"response":[36,128],"this":[38],"need,":[39],"we":[40,66],"previously":[41],"developed":[42],"Breeze,":[43],"a":[44,62,150],"drug":[45,106,127,135,145],"screening":[46,146],"data":[47,59,81,123,147],"analysis":[48,118,139],"pipeline,":[49],"designed":[50],"facilitate":[52],"quality":[53],"control,":[54],"dose-response":[55],"curve":[56],"fitting,":[57],"visualization":[60,91],"in":[61,168],"user-friendly":[63],"manner.":[64],"Here,":[65],"describe":[67],"latest":[69],"version":[70,132],"Breeze":[72,112,158],"(release":[73],"2.0),":[74],"which":[75],"implements":[76],"array":[78],"advanced":[80],"exploration":[82],"capabilities,":[83],"providing":[84],"users":[85],"with":[86,124],"comprehensive":[87],"post-analysis":[88],"interactive":[90],"options":[92],"that":[93],"essential":[95],"minimizing":[97],"false":[98],"positive/negative":[99],"outcomes":[100],"accurate":[103],"interpretation":[104],"sensitivity":[107],"resistance":[109],"data.":[110],"The":[111,130],"2.0":[113,159],"web-tool":[114],"also":[115],"enables":[116],"integrative":[117],"cross-comparison":[120],"user-uploaded":[122],"publicly":[125],"available":[126],"datasets.":[129],"updated":[131],"incorporates":[133],"new":[134],"quantification":[136],"metrics,":[137],"supports":[138],"both":[141],"multi-dose":[142],"single-dose":[144],"introduces":[149],"redesigned,":[151],"intuitive":[152],"user":[153],"interface.":[154],"With":[155],"these":[156],"enhancements,":[157],"is":[160],"anticipated":[161],"substantially":[163],"broaden":[164],"its":[165],"potential":[166],"diverse":[169],"domains":[170],"fPM.":[172]},"counts_by_year":[{"year":2026,"cited_by_count":4},{"year":2025,"cited_by_count":10},{"year":2024,"cited_by_count":4},{"year":2023,"cited_by_count":2}],"updated_date":"2026-04-14T08:04:32.555800","created_date":"2025-10-10T00:00:00"}
