{"id":"https://openalex.org/W1829370794","doi":"https://doi.org/10.1093/database/bav059","title":"G4RNA: an RNA G-quadruplex database","display_name":"G4RNA: an RNA G-quadruplex database","publication_year":2015,"publication_date":"2015-01-01","ids":{"openalex":"https://openalex.org/W1829370794","doi":"https://doi.org/10.1093/database/bav059","mag":"1829370794","pmid":"https://pubmed.ncbi.nlm.nih.gov/26200754"},"language":"it","primary_location":{"id":"doi:10.1093/database/bav059","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/bav059","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/bav059/20594529/bav059.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/bav059/20594529/bav059.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5075251048","display_name":"Jean\u2010Michel Garant","orcid":"https://orcid.org/0000-0002-0559-5598"},"institutions":[{"id":"https://openalex.org/I135117807","display_name":"Universit\u00e9 de Sherbrooke","ror":"https://ror.org/00kybxq39","country_code":"CA","type":"education","lineage":["https://openalex.org/I135117807"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Jean-Michel Garant","raw_affiliation_strings":["RNA Group/Groupe ARN, D\u00e9partement de biochimie, Facult\u00e9 de m\u00e9decine et des sciences de la sant\u00e9, Pavillon de recherche appliqu\u00e9e sur le cancer, Universit\u00e9 de Sherbrooke, QC J1E 4K8, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"RNA Group/Groupe ARN, D\u00e9partement de biochimie, Facult\u00e9 de m\u00e9decine et des sciences de la sant\u00e9, Pavillon de recherche appliqu\u00e9e sur le cancer, Universit\u00e9 de Sherbrooke, QC J1E 4K8, Canada","institution_ids":["https://openalex.org/I135117807"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5002548676","display_name":"Mikael J. Luce","orcid":null},"institutions":[{"id":"https://openalex.org/I135117807","display_name":"Universit\u00e9 de Sherbrooke","ror":"https://ror.org/00kybxq39","country_code":"CA","type":"education","lineage":["https://openalex.org/I135117807"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Mikael J. Luce","raw_affiliation_strings":["RNA Group/Groupe ARN, D\u00e9partement de biochimie, Facult\u00e9 de m\u00e9decine et des sciences de la sant\u00e9, Pavillon de recherche appliqu\u00e9e sur le cancer, Universit\u00e9 de Sherbrooke, QC J1E 4K8, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"RNA Group/Groupe ARN, D\u00e9partement de biochimie, Facult\u00e9 de m\u00e9decine et des sciences de la sant\u00e9, Pavillon de recherche appliqu\u00e9e sur le cancer, Universit\u00e9 de Sherbrooke, QC J1E 4K8, Canada","institution_ids":["https://openalex.org/I135117807"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5082027663","display_name":"Michelle S. Scott","orcid":"https://orcid.org/0000-0001-6231-7714"},"institutions":[{"id":"https://openalex.org/I135117807","display_name":"Universit\u00e9 de Sherbrooke","ror":"https://ror.org/00kybxq39","country_code":"CA","type":"education","lineage":["https://openalex.org/I135117807"]}],"countries":["CA"],"is_corresponding":true,"raw_author_name":"Michelle S. Scott","raw_affiliation_strings":["RNA Group/Groupe ARN, D\u00e9partement de biochimie, Facult\u00e9 de m\u00e9decine et des sciences de la sant\u00e9, Pavillon de recherche appliqu\u00e9e sur le cancer, Universit\u00e9 de Sherbrooke, QC J1E 4K8, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"RNA Group/Groupe ARN, D\u00e9partement de biochimie, Facult\u00e9 de m\u00e9decine et des sciences de la sant\u00e9, Pavillon de recherche appliqu\u00e9e sur le cancer, Universit\u00e9 de Sherbrooke, QC J1E 4K8, Canada","institution_ids":["https://openalex.org/I135117807"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5055670383","display_name":"Jean\u2010Pierre Perreault","orcid":"https://orcid.org/0000-0002-4559-5541"},"institutions":[{"id":"https://openalex.org/I135117807","display_name":"Universit\u00e9 de Sherbrooke","ror":"https://ror.org/00kybxq39","country_code":"CA","type":"education","lineage":["https://openalex.org/I135117807"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Jean-Pierre Perreault","raw_affiliation_strings":["RNA Group/Groupe ARN, D\u00e9partement de biochimie, Facult\u00e9 de m\u00e9decine et des sciences de la sant\u00e9, Pavillon de recherche appliqu\u00e9e sur le cancer, Universit\u00e9 de Sherbrooke, QC J1E 4K8, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"RNA Group/Groupe ARN, D\u00e9partement de biochimie, Facult\u00e9 de m\u00e9decine et des sciences de la sant\u00e9, Pavillon de recherche appliqu\u00e9e sur le cancer, Universit\u00e9 de Sherbrooke, QC J1E 4K8, Canada","institution_ids":["https://openalex.org/I135117807"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5082027663"],"corresponding_institution_ids":["https://openalex.org/I135117807"],"apc_list":{"value":1415,"currency":"GBP","value_usd":1735},"apc_paid":{"value":1415,"currency":"GBP","value_usd":1735},"fwci":1.6258,"has_fulltext":true,"cited_by_count":52,"citation_normalized_percentile":{"value":0.83004725,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":96,"max":99},"biblio":{"volume":"2015","issue":null,"first_page":"bav059","last_page":"bav059"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10432","display_name":"DNA and Nucleic Acid Chemistry","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10432","display_name":"DNA and Nucleic Acid Chemistry","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10207","display_name":"Advanced biosensing and bioanalysis techniques","score":0.9976000189781189,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6786826848983765},{"id":"https://openalex.org/keywords/g-quadruplex","display_name":"G-quadruplex","score":0.6313574910163879},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.5001962184906006},{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.4529487192630768},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.39583802223205566},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.387606143951416},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.3366053104400635},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.19890835881233215},{"id":"https://openalex.org/keywords/dna","display_name":"DNA","score":0.12688791751861572},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.12004232406616211}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6786826848983765},{"id":"https://openalex.org/C83762044","wikidata":"https://www.wikidata.org/wiki/Q411641","display_name":"G-quadruplex","level":3,"score":0.6313574910163879},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.5001962184906006},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.4529487192630768},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.39583802223205566},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.387606143951416},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.3366053104400635},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.19890835881233215},{"id":"https://openalex.org/C552990157","wikidata":"https://www.wikidata.org/wiki/Q7430","display_name":"DNA","level":2,"score":0.12688791751861572},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.12004232406616211}],"mesh":[{"descriptor_ui":"D012313","descriptor_name":"RNA","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012313","descriptor_name":"RNA","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012313","descriptor_name":"RNA","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D030561","descriptor_name":"Databases, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030561","descriptor_name":"Databases, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030561","descriptor_name":"Databases, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D054856","descriptor_name":"G-Quadruplexes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D054856","descriptor_name":"G-Quadruplexes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D054856","descriptor_name":"G-Quadruplexes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D059372","descriptor_name":"Nucleotide Motifs","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D059372","descriptor_name":"Nucleotide Motifs","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D059372","descriptor_name":"Nucleotide Motifs","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":4,"locations":[{"id":"doi:10.1093/database/bav059","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/bav059","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/bav059/20594529/bav059.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},{"id":"pmid:26200754","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/26200754","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database : the journal of biological databases and curation","raw_type":null},{"id":"pmh:oai:europepmc.org:4600455","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/5630937","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:oai:savoirs.usherbrooke.ca:11143/21117","is_oa":true,"landing_page_url":"http://hdl.handle.net/11143/21117","pdf_url":null,"source":{"id":"https://openalex.org/S4306401321","display_name":"Knowledge UdeS (Institutional Deposit of the University of Sherbrooke)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I135117807","host_organization_name":"Universit\u00e9 de Sherbrooke","host_organization_lineage":["https://openalex.org/I135117807"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Article"}],"best_oa_location":{"id":"doi:10.1093/database/bav059","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/bav059","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/bav059/20594529/bav059.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W1829370794.pdf","grobid_xml":"https://content.openalex.org/works/W1829370794.grobid-xml"},"referenced_works_count":40,"referenced_works":["https://openalex.org/W1483915883","https://openalex.org/W1964335041","https://openalex.org/W1964578544","https://openalex.org/W1965163574","https://openalex.org/W1998940503","https://openalex.org/W2008090633","https://openalex.org/W2011428226","https://openalex.org/W2018822137","https://openalex.org/W2027657574","https://openalex.org/W2032698727","https://openalex.org/W2061103938","https://openalex.org/W2074613554","https://openalex.org/W2091940856","https://openalex.org/W2107779830","https://openalex.org/W2120624230","https://openalex.org/W2122846880","https://openalex.org/W2130652515","https://openalex.org/W2131498592","https://openalex.org/W2169745877","https://openalex.org/W2317153190","https://openalex.org/W2334054197","https://openalex.org/W2335776587","https://openalex.org/W6628702658","https://openalex.org/W6641193068","https://openalex.org/W6641451325","https://openalex.org/W6641583043","https://openalex.org/W6652170625","https://openalex.org/W6653336632","https://openalex.org/W6655207468","https://openalex.org/W6658419320","https://openalex.org/W6665569278","https://openalex.org/W6669370418","https://openalex.org/W6676098488","https://openalex.org/W6678168974","https://openalex.org/W6678332203","https://openalex.org/W6679464148","https://openalex.org/W6679526122","https://openalex.org/W6684906163","https://openalex.org/W6699435787","https://openalex.org/W6702860994"],"related_works":["https://openalex.org/W2320293038","https://openalex.org/W2766452385","https://openalex.org/W2041730421","https://openalex.org/W2097720325","https://openalex.org/W2150354052","https://openalex.org/W2079977001","https://openalex.org/W2053679478","https://openalex.org/W3147118363","https://openalex.org/W2991117911","https://openalex.org/W2998279145"],"abstract_inverted_index":{"G-quadruplexes":[0],"(G4)":[1],"are":[2,66],"tetrahelical":[3],"structures":[4],"formed":[5],"from":[6,128],"planar":[7],"arrangement":[8],"of":[9,29,43,47,78,93],"guanines":[10],"in":[11,37,86],"nucleic":[12],"acids.":[13],"A":[14,115],"simple,":[15],"regular":[16],"motif":[17],"was":[18,31,101],"originally":[19,63],"proposed":[20,64],"to":[21,33,88,103,132,141,158],"describe":[22],"G4-forming":[23],"sequences.":[24,45,95],"More":[25],"recently,":[26],"however,":[27],"formation":[28],"G4":[30,48,56,144],"discovered":[32],"depend,":[34],"at":[35],"least":[36],"part,":[38],"on":[39,83,111,124],"the":[40,62,80,106,168],"contextual":[41],"backdrop":[42],"neighboring":[44],"Prediction":[46],"folding":[49],"is":[50],"thus":[51,71],"becoming":[52],"more":[53],"challenging":[54],"as":[55],"outlier":[57],"structures,":[58],"not":[59],"described":[60],"by":[61],"motif,":[65],"increasingly":[67],"reported.":[68],"Recent":[69],"observations":[70],"call":[72],"for":[73,108,121],"a":[74],"comprehensive":[75],"tool,":[76],"capable":[77],"consolidating":[79],"expanding":[81],"information":[82],"tested":[84,126],"G4s,":[85],"order":[87],"conduct":[89],"systematic":[90],"comparative":[91],"analyses":[92],"G4-promoting":[94],"The":[96],"G4RNA":[97,152],"Database":[98],"we":[99],"propose":[100],"designed":[102],"help":[104],"meet":[105],"need":[107],"easily-retrievable":[109],"data":[110,122,139],"known":[112],"RNA":[113],"G4s.":[114],"user-friendly,":[116],"flexible":[117],"query":[118],"system":[119],"allows":[120],"retrieval":[123],"experimentally":[125],"sequences,":[127],"many":[129],"separate":[130],"genes,":[131],"assess":[133],"G4-folding":[134],"potential.":[135],"Query":[136],"output":[137],"sorts":[138],"according":[140],"sequence":[142,163],"position,":[143],"likelihood,":[145],"experimental":[146,165],"outcomes":[147],"and":[148,160,164],"associated":[149],"bibliographical":[150],"references.":[151],"also":[153],"provides":[154],"an":[155],"ideal":[156],"foundation":[157],"collect":[159],"store":[161],"additional":[162],"data,":[166],"considering":[167],"growing":[169],"interest":[170],"G4s":[171],"currently":[172],"generate.":[173]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2025,"cited_by_count":4},{"year":2024,"cited_by_count":3},{"year":2023,"cited_by_count":6},{"year":2022,"cited_by_count":6},{"year":2021,"cited_by_count":5},{"year":2020,"cited_by_count":3},{"year":2019,"cited_by_count":12},{"year":2018,"cited_by_count":4},{"year":2017,"cited_by_count":3},{"year":2016,"cited_by_count":4}],"updated_date":"2026-06-18T08:10:14.011955","created_date":"2025-10-10T00:00:00"}
